Factsheet for GSMUA_Achr3P28090_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P22720_001	Banana	plastid	22.08	83.33
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	63.9	75.23
GSMUA_Achr10P...	Banana	plastid	64.94	70.62
Solyc02g065700.2.1	Tomato	cytosol	51.43	70.46
PGSC0003DMT400068320	Potato	cytosol	50.65	69.39
Solyc02g089320.2.1	Tomato	plastid	63.9	68.52
PGSC0003DMT400003495	Potato	plastid	65.71	67.11
KRH18325	Soybean	cytosol, nucleus, peroxisome	65.71	66.93
KRG93729	Soybean	cytosol	65.71	66.93
KRH45145	Soybean	plastid	65.97	66.49
VIT_01s0010g00670.t01	Wine grape	plastid	65.45	66.32
KRH01428	Soybean	plastid	65.45	66.32
GSMUA_Achr3P17130_001	Banana	plastid	61.04	64.03
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	58.7	63.84
GSMUA_Achr9P02010_001	Banana	plastid	60.52	63.49
CDY35777	Canola	cytosol	62.08	63.4
PGSC0003DMT400068318	Potato	plastid	18.44	62.83
CDX86348	Canola	cytosol, nucleus, plastid	62.34	62.83
CDX85290	Canola	cytosol, nucleus, plastid	62.34	62.83
GSMUA_Achr8P28640_001	Banana	plastid	59.74	62.67
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	61.82	62.47
GSMUA_Achr9P07620_001	Banana	plastid	58.96	61.68
Bra019712.1-P	Field mustard	cytosol	42.34	60.82
GSMUA_Achr8P17940_001	Banana	plastid	53.51	60.06
GSMUA_Achr5P04500_001	Banana	cytosol	45.97	60.0
CDX98113	Canola	plastid	56.62	59.89
GSMUA_Achr3P04580_001	Banana	cytosol	45.19	58.98
CDY56180	Canola	plastid	55.58	58.95
AT3G30380.1	Thale cress	cytosol	60.78	58.65
GSMUA_Achr9P13240_001	Banana	cytosol	44.94	58.64
AT1G13610.1	Thale cress	plastid	54.29	58.38
GSMUA_Achr11P...	Banana	cytosol	44.68	58.31
VIT_14s0083g00800.t01	Wine grape	plastid	64.94	56.82
PGSC0003DMT400050553	Potato	cytosol	50.39	52.29
GSMUA_Achr1P06250_001	Banana	plastid	45.71	52.23
Bra040729.1-P	Field mustard	plastid	15.32	52.21
Solyc05g010680.1.1	Tomato	cytosol	51.17	51.44
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	45.19	51.03
CDY45906	Canola	cytosol	28.31	48.88
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	30.65	42.6
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	20.26	40.84

Protein Annotations

EnsemblPlants:GSMUA_Achr3P28090_001	EnsemblPlants:GSMUA_Achr3T28090_001	EnsemblPlantsGene:GSMUA_Achr3G28090_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002965379	UniProt:M0SIH5	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28090_001]

Coordinates

chr3:+:27482257..27486483

Molecular Weight (calculated)

43142.4 Da

IEP (calculated)

8.016

GRAVY (calculated)

-0.540

Length

385 amino acids

Sequence
(BLAST)

001: MGGVTSTMAA KFAFFPPSPP SYGVTAATEG RLEMTDVPPR ENVEAWRLPT RRGTEIVAMY VKNPAASLTL LYSHGNAADL GQMYELFWQL SKHLCVNLMG
101: YDYSGYGQSS GKPSEQNTYA DIEAAYKCLE VAYGTHAEDI ILYGQSVGSG PTLELAARLP NLRAAVLHSP ILSGLRVMYP VKHTYWFDIY KNIDKIPLVQ
201: CPVLVIHGMV DDVVDWSHGK QLWELSKVKY EPLWVKAGNH CNLELFPEYI RHLKKFISAI EKAPPPRTAS TESSVPQDPP SMSSDHLDHQ RSMDKMENLR
301: SSTDHKEKGG NSTDRREKPR LSTDKKEKSR KSFDISDRAR NSMDQQEKPR KSFERLGGMI KSVSLCNIDC FKGPASQSEE CKGQC

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.