Factsheet for Bra020738.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35777	Canola	cytosol	98.59	92.57
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	92.66	86.09
AT3G30380.1	Thale cress	cytosol	89.55	79.45
CDY45906	Canola	cytosol	49.44	78.48
Solyc02g065700.2.1	Tomato	cytosol	56.21	70.82
GSMUA_Achr9P22720_001	Banana	plastid	20.34	70.59
Solyc02g089320.2.1	Tomato	plastid	70.9	69.92
PGSC0003DMT400068320	Potato	cytosol	54.52	68.68
KRG93729	Soybean	cytosol	71.47	66.93
PGSC0003DMT400003495	Potato	plastid	70.9	66.58
KRH18325	Soybean	cytosol, nucleus, peroxisome	70.34	65.87
KRH01428	Soybean	plastid	70.06	65.26
Bra037774.1-P	Field mustard	cytosol	49.72	64.71
Bra034043.1-P	Field mustard	cytosol	49.72	64.71
Bra030401.1-P	Field mustard	cytosol	49.72	64.71
KRH45145	Soybean	plastid	69.21	64.14
PGSC0003DMT400068318	Potato	plastid	20.06	62.83
Bra011242.1-P	Field mustard	cytosol	51.69	62.24
Bra024028.1-P	Field mustard	cytosol	51.13	61.56
Bra007861.1-P	Field mustard	cytosol	50.56	60.88
GSMUA_Achr10P...	Banana	plastid	60.73	60.73
OQU76743	Sorghum	cytosol, mitochondrion	53.95	60.44
Bra010259.1-P	Field mustard	cytosol	50.0	60.2
Bra013831.1-P	Field mustard	cytosol	62.15	60.11
Bra032105.1-P	Field mustard	cytosol	49.72	59.86
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	63.84	58.7
Bra008761.1-P	Field mustard	endoplasmic reticulum	61.3	58.65
TraesCS7B01G293000.1	Wheat	plastid	62.71	57.96
TraesCS7A01G391300.1	Wheat	plastid	62.71	57.96
Bra028401.1-P	Field mustard	plastid	56.21	57.85
Os02t0190800-01	Rice	plasma membrane	63.56	57.84
TraesCS7D01G386800.1	Wheat	plastid	62.43	57.7
TraesCS6D01G160600.1	Wheat	plastid	63.28	56.85
TraesCS6B01G199000.1	Wheat	plastid	63.28	56.85
TraesCS6A01G170900.1	Wheat	plastid	63.56	56.82
HORVU6Hr1G034870.2	Barley	plastid	63.28	56.14
Bra040729.1-P	Field mustard	plastid	17.8	55.75
Bra004197.1-P	Field mustard	cytosol	12.71	55.56
Bra014940.1-P	Field mustard	cytosol	12.71	55.56
VIT_14s0083g00800.t01	Wine grape	plastid	68.64	55.23
EES06425	Sorghum	plastid	62.99	54.52
HORVU7Hr1G092460.1	Barley	plastid	62.71	53.49
Bra023463.1-P	Field mustard	cytosol	40.96	52.73
Zm00001d046660_P001	Maize	plastid	61.86	52.02
Zm00001d015656_P001	Maize	plastid	63.28	51.85
Bra040701.1-P	Field mustard	plastid	46.61	50.77
Bra019712.1-P	Field mustard	cytosol	37.85	50.0
TraesCS7B01G196600.1	Wheat	cytosol	57.06	49.27
TraesCS7D01G284300.3	Wheat	cytosol	57.06	49.27
KXG25721	Sorghum	cytosol	56.78	48.79
Zm00001d052810_P001	Maize	cytosol	56.5	47.85
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	58.47	46.31
Zm00001d012172_P001	Maize	mitochondrion	29.94	45.3
Zm00001d053705_P001	Maize	cytosol	27.12	44.44
Bra023247.1-P	Field mustard	plastid	46.89	40.39
Bra019211.1-P	Field mustard	nucleus	62.71	40.22
Bra033847.1-P	Field mustard	plastid	47.46	39.07

Protein Annotations

EnsemblPlants:Bra020738.1	EnsemblPlants:Bra020738.1-P	EnsemblPlantsGene:Bra020738	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	PFAM:PF00561	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002545F75	UniProt:M4DW44	MapMan:35.2	:	:	:

Description

AT3G30380 (E=6e-148) | INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 3127 Blast hits to 3124 proteins in 513 species: Archae - 3; Bacteria - 775; Metazoa - 627; Fungi - 135; Plants - 158; Viruses - 6; Other Eukaryotes - 1423 (source: NCBI BLink).

Coordinates

chrA02:+:23404784..23406590

Molecular Weight (calculated)

39759.3 Da

IEP (calculated)

9.369

GRAVY (calculated)

-0.592

Length

354 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KFAFFPPNPP SYGVEVASET GKLRLTGVEN VKENVEVLKL KTKRGNQVVA AYIKNPTASL TLLYSHGNAA DLGQMFELFS ELSLHLRVNL
101: IGYDYSGYGR SSGKPSEQNT YYDIEAVYRC LEEQYNVKEQ DVILYGQSVG SGPTLELASR LPNLRAVVLH SAIASGLRVM YPVKRTYWFD IYKNVDKISS
201: VKCPVLVIHG TSDDVVKWSH GKQLFDLCKE KYEPLWIKGG NHCDLELYPQ YIKHLKKFVS AVEKSPHQGQ ACVPPQTEKA RSSTDVREPA RPSTDQREKS
301: RTSMDQREMP KLSVESKDKA RASVDKRERT RKSVDGNATE QQIQTEKARN SIDR

Best Arabidopsis Sequence Match ( AT3G30380.2 )
(BLAST)

001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.