Factsheet for Bra019712.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56180	Canola	plastid	95.52	70.52
AT1G13610.1	Thale cress	plastid	80.22	60.06
OQU76743	Sorghum	cytosol, mitochondrion	59.33	50.32
Bra023463.1-P	Field mustard	cytosol	49.25	48.0
VIT_01s0010g00670.t01	Wine grape	plastid	66.42	46.84
Zm00001d053705_P001	Maize	cytosol	35.07	43.52
GSMUA_Achr10P...	Banana	plastid	57.09	43.22
Bra032105.1-P	Field mustard	cytosol	46.64	42.52
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	60.82	42.34
Bra024028.1-P	Field mustard	cytosol	46.27	42.18
Bra011242.1-P	Field mustard	cytosol	45.9	41.84
TraesCS7D01G386800.1	Wheat	plastid	59.33	41.51
Bra010259.1-P	Field mustard	cytosol	45.52	41.5
TraesCS7B01G293000.1	Wheat	plastid	58.96	41.25
TraesCS7A01G391300.1	Wheat	plastid	58.96	41.25
Bra007861.1-P	Field mustard	cytosol	44.78	40.82
TraesCS6A01G170900.1	Wheat	plastid	59.7	40.4
TraesCS6B01G199000.1	Wheat	plastid	59.33	40.36
TraesCS6D01G160600.1	Wheat	plastid	58.96	40.1
HORVU6Hr1G034870.2	Barley	plastid	59.7	40.1
Os02t0190800-01	Rice	plasma membrane	57.84	39.85
Bra013831.1-P	Field mustard	cytosol	53.73	39.34
EES06425	Sorghum	plastid	59.33	38.88
Bra008761.1-P	Field mustard	endoplasmic reticulum	53.36	38.65
Bra037774.1-P	Field mustard	cytosol	39.18	38.6
Bra034043.1-P	Field mustard	cytosol	39.18	38.6
Bra030401.1-P	Field mustard	cytosol	39.18	38.6
Bra040701.1-P	Field mustard	plastid	46.64	38.46
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	54.48	38.32
HORVU7Hr1G092460.1	Barley	plastid	59.33	38.31
Zm00001d046660_P001	Maize	plastid	60.07	38.24
Zm00001d012172_P001	Maize	mitochondrion	33.21	38.03
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	50.0	37.85
Solyc05g010680.1.1	Tomato	cytosol	52.99	37.08
Zm00001d015656_P001	Maize	plastid	58.96	36.57
Bra028401.1-P	Field mustard	plastid	45.9	35.76
TraesCS7D01G284300.3	Wheat	cytosol	54.1	35.37
PGSC0003DMT400050553	Potato	cytosol	48.88	35.31
TraesCS7B01G196600.1	Wheat	cytosol	53.73	35.12
KXG25721	Sorghum	cytosol	52.61	34.22
Zm00001d052810_P001	Maize	cytosol	51.87	33.25
HORVU7Hr1G061990.5	Barley	cytosol, nucleus, plastid	54.48	32.66
Bra023247.1-P	Field mustard	plastid	40.67	26.52
Bra033847.1-P	Field mustard	plastid	42.16	26.28
Bra019211.1-P	Field mustard	nucleus	52.61	25.54
Bra040729.1-P	Field mustard	plastid	1.87	4.42
Bra014940.1-P	Field mustard	cytosol	0.75	2.47
Bra004197.1-P	Field mustard	cytosol	0.75	2.47
GSMUA_Achr9P22720_001	Banana	plastid	0.37	0.98

Protein Annotations

EnsemblPlants:Bra019712.1	EnsemblPlants:Bra019712.1-P	EnsemblPlantsGene:Bra019712	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF77	PFAM:PF12146	SUPFAM:SSF53474	UniParc:UPI000253EDED
UniProt:M4DT69	MapMan:35.2	:	:	:	:

Description

AT1G13610 (E=7e-121) | INVOLVED IN: biological_process unknown; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30380.2); Has 3358 Blast hits to 3354 proteins in 579 species: Archae - 6; Bacteria - 974; Metazoa - 587; Fungi - 165; Plants - 174; Viruses - 11; Other Eukaryotes - 1441 (source: NCBI BLink).

Coordinates

chrA06:-:4835072..4836388

Molecular Weight (calculated)

30742.6 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.613

Length

268 amino acids

Sequence
(BLAST)

001: MVFCDDNCRY DYSGYGRSSG KPSEQETYAD IEAAYNWLRE TYGTKDERII LYGQSVGSGP SLELASRLPR LRALVLHSPF LSGLRVMYHV KHSFWFDIFK
101: NIEKIQLVDC PVLVIHGTDD KVVDISHGKQ LWELSKEKYE PLWLKGGSHC NLEMFPEYLP HLRKFIGAIE KLPVPQFRRH SVSDDHKKDK QQLDPKKSSG
201: WIGSRHSTEC VTSRDKSRKM SIGHRSGKAR NSTDSFDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEA

Best Arabidopsis Sequence Match ( AT1G13610.1 )
(BLAST)

001: MGIATSTMAA KLAFFPPNPP SYTVVTEEST GKMMISTNLP HYLRDENIEV VKIRTKRGNE IVAMYVKNPT AKLTVLFSHG NASDLAQIFY ILAELIQLNV
101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI
201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC
301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ68]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.