Factsheet for TraesCS6A01G170900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G160600.1	Wheat	plastid	98.74	99.24
TraesCS6B01G199000.1	Wheat	plastid	97.98	98.48
HORVU6Hr1G034870.2	Barley	plastid	98.23	97.49
TraesCS7A01G391300.1	Wheat	plastid	80.05	82.77
Solyc02g065700.2.1	Tomato	cytosol	48.99	69.04
GSMUA_Achr10P...	Banana	plastid	61.36	68.64
PGSC0003DMT400068320	Potato	cytosol	48.23	67.97
Solyc02g089320.2.1	Tomato	plastid	58.84	64.9
TraesCS6A01G360000.1	Wheat	cytosol	45.2	64.86
KRH18325	Soybean	cytosol, nucleus, peroxisome	61.87	64.81
PGSC0003DMT400003495	Potato	plastid	61.62	64.72
KRG93729	Soybean	cytosol	61.62	64.55
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	56.82	63.56
CDY35777	Canola	cytosol	59.85	62.86
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	60.35	62.73
KRH01428	Soybean	plastid	60.1	62.63
VIT_01s0010g00670.t01	Wine grape	plastid	60.1	62.63
CDX85290	Canola	cytosol, nucleus, plastid	60.35	62.57
CDX86348	Canola	cytosol, nucleus, plastid	60.1	62.3
KRH45145	Soybean	plastid	59.85	62.04
Bra019712.1-P	Field mustard	cytosol	40.4	59.7
PGSC0003DMT400068318	Potato	plastid	16.67	58.41
CDX98113	Canola	plastid	53.54	58.24
AT3G30380.1	Thale cress	cytosol	58.33	57.89
AT1G13610.1	Thale cress	plastid	52.02	57.54
CDY56180	Canola	plastid	52.53	57.3
TraesCS3A01G262400.1	Wheat	plastid	51.26	55.77
VIT_14s0083g00800.t01	Wine grape	plastid	59.6	53.64
PGSC0003DMT400050553	Potato	cytosol	49.75	53.1
Solyc05g010680.1.1	Tomato	cytosol	51.01	52.74
TraesCS7A01G298400.1	Wheat	plastid	45.45	52.02
Bra040729.1-P	Field mustard	plastid	14.14	49.56
CDY45906	Canola	cytosol	27.53	48.88

Protein Annotations

EnsemblPlants:TraesCS6A01G170900.1	EnsemblPlantsGene:TraesCS6A01G170900	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF70	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr6A:+:181563498..181569720

Molecular Weight (calculated)

43572.6 Da

IEP (calculated)

9.136

GRAVY (calculated)

-0.550

Length

396 amino acids

Sequence
(BLAST)

001: MGGVTSTVAA RFAFFPPSPP SYGVEPLPPP DAAGAGAAAG EAKGKEGSVV VELTGVPRRA NVEARRLRTK RGTDVVAMYA RQTGAKLTLL YSHGNAADLG
101: QMYELFVELS AHLNVNLMGY DYSGYGQSSG KPSEQNTYAD IEAVYRCLIE TYAASEENII LYGQSVGSGP TLDLASRLPR LRAVVVHSPI LSGLRVMYPV
201: KHTYWFDIYK NIDKIPLVSC PVLVIHGTAD EVVDCSHGRA LWELAKVKYE PLWVKGGNHC NLELYPEYIK HLKKFVGAIE KLPAPSDESP ESSGASDRTQ
301: TEPEGTEEPR KSVDHREKTR PSIDHRKSTD RRDKPRGSTD RRDKSRKSVD NPDRPRASVD QPDRPRKSVD RFGGMMKAVR LRNIDCFKVP TTSSGS

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.