Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G343000.1 | Wheat | cytosol | 98.91 | 98.2 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 98.91 | 98.2 |
| HORVU6Hr1G085730.5 | Barley | mitochondrion | 81.52 | 89.64 |
| Os02t0796600-01 | Rice | cytosol | 78.26 | 81.82 |
| KXG31273 | Sorghum | plastid | 87.68 | 79.61 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 57.61 | 76.81 |
| GSMUA_Achr5P04500_001 | Banana | cytosol | 79.35 | 74.24 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 78.62 | 73.56 |
| GSMUA_Achr11P... | Banana | cytosol | 77.54 | 72.54 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 77.17 | 72.2 |
| Bra011242.1-P | Field mustard | cytosol | 75.72 | 71.09 |
| CDX68717 | Canola | cytosol | 75.36 | 70.75 |
| Bra010259.1-P | Field mustard | cytosol | 75.36 | 70.75 |
| CDY23273 | Canola | cytosol | 75.36 | 70.75 |
| CDY28238 | Canola | cytosol | 75.36 | 70.75 |
| CDY51485 | Canola | cytosol | 75.36 | 70.75 |
| AT4G31020.2 | Thale cress | cytosol | 75.0 | 70.41 |
| Bra024028.1-P | Field mustard | cytosol | 75.0 | 70.41 |
| KRH20089 | Soybean | cytosol | 74.64 | 70.31 |
| CDY20302 | Canola | cytosol | 67.03 | 70.08 |
| CDY13406 | Canola | cytosol | 74.64 | 70.07 |
| CDX72285 | Canola | cytosol | 74.28 | 69.73 |
| KRH12940 | Soybean | cytosol | 74.64 | 69.36 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 59.06 | 67.92 |
| AT2G24320.2 | Thale cress | cytosol | 71.38 | 67.24 |
| PGSC0003DMT400008297 | Potato | cytosol | 71.74 | 67.12 |
| Solyc07g005130.2.1 | Tomato | cytosol | 71.74 | 67.12 |
| CDY55247 | Canola | cytosol | 71.38 | 67.01 |
| Bra007861.1-P | Field mustard | cytosol | 71.38 | 67.01 |
| CDY34778 | Canola | cytosol | 71.38 | 67.01 |
| Bra032105.1-P | Field mustard | cytosol | 71.01 | 66.67 |
| CDY20301 | Canola | cytosol | 70.65 | 66.1 |
| CDY46139 | Canola | cytosol | 56.52 | 61.9 |
| TraesCS7A01G298400.1 | Wheat | plastid | 63.77 | 50.87 |
| TraesCS3A01G262400.1 | Wheat | plastid | 62.68 | 47.53 |
| TraesCS7A01G391300.1 | Wheat | plastid | 64.49 | 46.48 |
| TraesCS6A01G170900.1 | Wheat | plastid | 64.86 | 45.2 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G360000.1 | EnsemblPlantsGene:TraesCS6A01G360000 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:IPR029058 | PANTHER:PTHR12277 |
| PANTHER:PTHR12277:SF118 | SUPFAM:SSF53474 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6A:-:591264398..591267746
Molecular Weight (calculated)
30845.3 Da
IEP (calculated)
7.989
GRAVY (calculated)
-0.105
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVTSSVAA RLAFFPPEPA TYEVAAEEGG LRMTGVLPDA NVDVHALPTR AGTRVVAAFW RYPTARLTLL YSHGNAADLG QMLGLFMELR SHLRVNIMCY
101: DYSGYGASTG KPSEYNTYYD IEAVYDCLKK EYGIGQEDLI LYGQSVGSGP TLHLASRLEK LRGVVLHSGI LSGIRVLYPV KVTLWFDIFK NIDKIKQVEC
201: PVLVIHGTAD DIVDFSHGKR LWELAKEKYE PLWVKGGGHC NLETYPEYIR HLRKFVNAME KLAKERATKA PQTLMI
101: DYSGYGASTG KPSEYNTYYD IEAVYDCLKK EYGIGQEDLI LYGQSVGSGP TLHLASRLEK LRGVVLHSGI LSGIRVLYPV KVTLWFDIFK NIDKIKQVEC
201: PVLVIHGTAD DIVDFSHGKR LWELAKEKYE PLWVKGGGHC NLETYPEYIR HLRKFVNAME KLAKERATKA PQTLMI
001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.