Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0796600-01 | Rice | cytosol | 90.44 | 85.98 |
| TraesCS6A01G360000.1 | Wheat | cytosol | 89.64 | 81.52 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 89.64 | 80.94 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 88.84 | 80.22 |
| KXG31273 | Sorghum | plastid | 89.24 | 73.68 |
| GSMUA_Achr5P04500_001 | Banana | cytosol | 79.28 | 67.46 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 78.88 | 67.12 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 77.69 | 66.1 |
| GSMUA_Achr11P... | Banana | cytosol | 76.89 | 65.42 |
| Bra011242.1-P | Field mustard | cytosol | 76.49 | 65.31 |
| Bra024028.1-P | Field mustard | cytosol | 76.49 | 65.31 |
| CDX68717 | Canola | cytosol | 76.49 | 65.31 |
| CDY13406 | Canola | cytosol | 76.49 | 65.31 |
| AT4G31020.2 | Thale cress | cytosol | 76.1 | 64.97 |
| CDY28238 | Canola | cytosol | 76.1 | 64.97 |
| Bra010259.1-P | Field mustard | cytosol | 76.1 | 64.97 |
| KRH20089 | Soybean | cytosol | 75.7 | 64.85 |
| CDX72285 | Canola | cytosol | 75.7 | 64.63 |
| CDY51485 | Canola | cytosol | 75.7 | 64.63 |
| CDY23273 | Canola | cytosol | 75.7 | 64.63 |
| KRH12940 | Soybean | cytosol | 75.3 | 63.64 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 52.19 | 63.28 |
| Solyc07g005130.2.1 | Tomato | cytosol | 74.1 | 63.05 |
| AT2G24320.2 | Thale cress | cytosol | 72.91 | 62.46 |
| PGSC0003DMT400008297 | Potato | cytosol | 73.31 | 62.37 |
| CDY20302 | Canola | cytosol | 64.94 | 61.74 |
| CDY34778 | Canola | cytosol | 71.71 | 61.22 |
| Bra007861.1-P | Field mustard | cytosol | 71.71 | 61.22 |
| CDY55247 | Canola | cytosol | 71.71 | 61.22 |
| Bra032105.1-P | Field mustard | cytosol | 71.31 | 60.88 |
| CDY20301 | Canola | cytosol | 70.52 | 60.0 |
| CDY46139 | Canola | cytosol | 57.37 | 57.14 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 53.78 | 56.25 |
| HORVU3Hr1G064120.3 | Barley | plastid | 61.35 | 42.54 |
| HORVU6Hr1G034870.2 | Barley | plastid | 63.74 | 40.1 |
| HORVU7Hr1G070080.3 | Barley | plastid | 53.78 | 38.68 |
| HORVU7Hr1G092460.1 | Barley | plastid | 63.74 | 38.55 |
| HORVU7Hr1G061990.5 | Barley | cytosol, nucleus, plastid | 56.18 | 31.54 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G085730.5 | EnsemblPlantsGene:HORVU6Hr1G085730 | Gene3D:3.40.50.1820 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008236 | GO:GO:0016787 | GO:GO:0019538 | InterPro:AB_hydrolase |
| InterPro:IPR029058 | InterPro:Peptidase_S9 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF00326 | SUPFAM:SSF53474 |
| UniParc:UPI000B46999B | UniProt:A0A287V0Z0 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:559875782..559880050
Molecular Weight (calculated)
28235.2 Da
IEP (calculated)
9.331
GRAVY (calculated)
-0.215
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: VHALPTRAGT RVVAAFWRYP SARLTLLYSH GNAADLGQML GLFMELRSHL RVNIMCYDYS GYGASTGKPS EYNTYYDIEA VYDCLKKEYG IGPEELILYG
101: QSVGSGPTLH LASRLEKLRG VVLHSGILSG IRVLYPVKVT LWFDIFKNID KIKQVECPVL VIHGTADDIV DFSHGKRLWE LAKEKYEPLW VKGGGHCNLE
201: TYPEYIRHLR KFVNAMEKLA KERAAKAPQV PPSSSSSMAE AKHNKCLRFG K
101: QSVGSGPTLH LASRLEKLRG VVLHSGILSG IRVLYPVKVT LWFDIFKNID KIKQVECPVL VIHGTADDIV DFSHGKRLWE LAKEKYEPLW VKGGGHCNLE
201: TYPEYIRHLR KFVNAMEKLA KERAAKAPQV PPSSSSSMAE AKHNKCLRFG K
001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.