CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G085730.5	Barley	mitochondrion	73.68	89.24
Os02t0796600-01	Rice	cytosol	76.32	87.88
TraesCS6A01G360000.1	Wheat	cytosol	79.61	87.68
TraesCS6B01G392900.1	Wheat	cytosol	79.28	86.69
TraesCS6D01G343000.1	Wheat	cytosol	78.95	86.33
GSMUA_Achr9P13240_001	Banana	cytosol	75.0	77.29
GSMUA_Achr5P04500_001	Banana	cytosol	75.0	77.29
GSMUA_Achr3P04580_001	Banana	cytosol	73.68	75.93
VIT_11s0149g00410.t01	Wine grape	cytosol	50.33	73.91
GSMUA_Achr11P...	Banana	cytosol	71.71	73.9
CDX68717	Canola	cytosol	71.38	73.81
Bra011242.1-P	Field mustard	cytosol	71.05	73.47
CDY28238	Canola	cytosol	70.72	73.13
CDY51485	Canola	cytosol	70.39	72.79
CDY23273	Canola	cytosol	70.39	72.79
Bra010259.1-P	Field mustard	cytosol	70.39	72.79
AT4G31020.2	Thale cress	cytosol	70.07	72.45
Bra024028.1-P	Field mustard	cytosol	70.07	72.45
CDY13406	Canola	cytosol	69.74	72.11
KRH20089	Soybean	cytosol	69.08	71.67
CDX72285	Canola	cytosol	69.08	71.43
KRH12940	Soybean	cytosol	69.41	71.04
CDY20302	Canola	cytosol	60.2	69.32
Bra007861.1-P	Field mustard	cytosol	66.78	69.05
CDY34778	Canola	cytosol	66.78	69.05
CDY55247	Canola	cytosol	66.45	68.71
Bra032105.1-P	Field mustard	cytosol	65.79	68.03
Solyc07g005130.2.1	Tomato	cytosol	65.79	67.8
AT2G24320.2	Thale cress	cytosol	65.13	67.58
CDY20301	Canola	cytosol	65.46	67.46
PGSC0003DMT400008297	Potato	cytosol	65.13	67.12
VIT_11s0206g00050.t01	Wine grape	cytosol	51.97	65.83
CDY46139	Canola	cytosol	52.63	63.49
OQU76743	Sorghum	cytosol, mitochondrion	50.99	49.05
EES14598	Sorghum	plastid	56.58	46.99
EES01292	Sorghum	plastid	56.58	46.49
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	55.26	45.78
EES06425	Sorghum	plastid	60.53	44.99
KXG25721	Sorghum	cytosol	55.26	40.78

Protein Annotations

EnsemblPlants:KXG31273	EnsemblPlantsGene:SORBI_3004G331000	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	ProteinID:KXG31273	ProteinID:KXG31273.1	SEG:seg
SUPFAM:SSF53474	unigene:Sbi.19859	UniParc:UPI0007F1A48F	UniProt:A0A194YSQ8	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr4:-:66431050..66435176

Molecular Weight (calculated)

33689.5 Da

IEP (calculated)

9.338

GRAVY (calculated)

-0.243

Length

304 amino acids

Sequence
(BLAST)

001: MGNVTSSVAA RLAFFPPEPA TYGIEAQDGA GSLLRMTGVS PDTGVEVRAL PTRAGTRVVS AFWRHPAARL TLLYSHGNAA DLGQMFGLFL ELRAHLRVNI
101: MSYDYSGYGA STGKPSEYNT YNDIEAVYDC LKKEYGIEEE DLILYGQSVG SGPTLHLASR LEKLRGVVLH SGILSGIRVL YPVKVTLWFD IFKNIDKIKQ
201: VACPVLVIHG TADDIVDFTH GKRLWELAKE KYEPLWIKGG GHCNLETYPE YIRHLRKFIN AMEKLAKDSK AAQAPPSSSL AAEARHSKCL RFGKSRRRDS
301: TGRQ

Best Arabidopsis Sequence Match ( AT4G31020.2 )
(BLAST)

001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.