Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20302 | Canola | cytosol | 87.46 | 97.73 |
| CDY55247 | Canola | cytosol | 91.19 | 91.5 |
| CDY34778 | Canola | cytosol | 90.17 | 90.48 |
| CDY46139 | Canola | cytosol | 74.24 | 86.9 |
| AT2G24320.2 | Thale cress | cytosol | 84.75 | 85.32 |
| CDY28238 | Canola | cytosol | 83.05 | 83.33 |
| CDX68717 | Canola | cytosol | 82.71 | 82.99 |
| CDY51485 | Canola | cytosol | 82.71 | 82.99 |
| CDY13406 | Canola | cytosol | 82.37 | 82.65 |
| CDX72285 | Canola | cytosol | 82.03 | 82.31 |
| CDY23273 | Canola | cytosol | 81.02 | 81.29 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 54.92 | 78.26 |
| KRH20089 | Soybean | cytosol | 75.25 | 75.77 |
| PGSC0003DMT400008297 | Potato | cytosol | 71.53 | 71.53 |
| GSMUA_Achr5P04500_001 | Banana | cytosol | 71.53 | 71.53 |
| Solyc07g005130.2.1 | Tomato | cytosol | 71.19 | 71.19 |
| TraesCS6A01G360000.1 | Wheat | cytosol | 66.1 | 70.65 |
| HORVU6Hr1G085730.5 | Barley | mitochondrion | 60.0 | 70.52 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 70.51 | 70.51 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 66.44 | 70.5 |
| KRH12940 | Soybean | cytosol | 70.85 | 70.37 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 66.1 | 70.14 |
| Os02t0796600-01 | Rice | cytosol | 62.37 | 69.7 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 56.61 | 69.58 |
| GSMUA_Achr11P... | Banana | cytosol | 68.81 | 68.81 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 68.47 | 68.47 |
| KXG31273 | Sorghum | plastid | 67.46 | 65.46 |
| CDY37505 | Canola | cytosol, extracellular | 13.56 | 59.7 |
| CDY31930 | Canola | cytosol | 12.54 | 57.81 |
| CDY37504 | Canola | cytosol | 14.58 | 56.58 |
| CDX91066 | Canola | plastid | 57.97 | 52.13 |
| CDY27016 | Canola | plastid | 58.64 | 50.58 |
| CDY51065 | Canola | plastid | 58.64 | 50.29 |
| CDY35552 | Canola | plastid | 58.98 | 49.86 |
| CDY32850 | Canola | cytosol | 57.29 | 49.13 |
| CDX77081 | Canola | plastid | 34.92 | 48.82 |
| CDX69584 | Canola | endoplasmic reticulum | 60.34 | 48.11 |
| CDY09851 | Canola | plastid | 60.0 | 47.84 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 61.36 | 47.38 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 61.02 | 47.12 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 57.63 | 47.09 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 57.63 | 47.09 |
| CDY03421 | Canola | cytosol | 56.95 | 46.8 |
| CDY35777 | Canola | cytosol | 59.66 | 46.68 |
| CDX98113 | Canola | plastid | 57.29 | 46.43 |
| CDY34308 | Canola | cytosol | 57.29 | 46.17 |
| CDY56180 | Canola | plastid | 56.61 | 46.01 |
| CDX85599 | Canola | cytosol | 38.64 | 43.68 |
| CDY12257 | Canola | plastid | 57.63 | 41.36 |
| CDY22593 | Canola | plastid | 57.29 | 41.12 |
| CDY43012 | Canola | plastid | 58.31 | 39.91 |
| CDX92650 | Canola | cytosol | 57.97 | 39.4 |
| CDY11031 | Canola | cytosol, plastid | 27.46 | 33.89 |
| CDY53272 | Canola | plastid | 17.29 | 32.48 |
| CDY45906 | Canola | cytosol | 20.68 | 27.35 |
Protein Annotations
| EnsemblPlants:CDY20301 | EnsemblPlantsGene:GSBRNA2T00012230001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | ProteinID:CDY20301 | ProteinID:CDY20301.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EF2847 | UniProt:A0A078G4F3 | MapMan:35.2 | : | : | : |
Description
BnaC04g36550DBnaC04g36550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4F3]
Coordinates
chrLK032105:-:460209..461409
Molecular Weight (calculated)
33361.3 Da
IEP (calculated)
9.532
GRAVY (calculated)
-0.314
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVTSNVAA KLAFFPPSPA TYGVSKDEET GKLMFTGVTP EKSMVDVHQI TTKSGNKVVA TFWKDPFARF TLIYSHGNAA DLGQMVELFI ELRAHLRVNV
101: MSYDYSGYGA STGKPSEVNT YHDIEAVYNC LRSEYGIKQE EMVLYGQSVG SGPTLYLASR LKRLRGVVLH SAILSGIRVL YPVKMTFWFD IYKNIERIRH
201: VTCPVLVIHG TKDEVVNMSH GKKLWEISKD KYDPLWVKGG GHCNLESYPE YIKHLRKFIN AMEKLALNNP PTKQADDEPS ITKTKHNCCL RFRKK
101: MSYDYSGYGA STGKPSEVNT YHDIEAVYNC LRSEYGIKQE EMVLYGQSVG SGPTLYLASR LKRLRGVVLH SAILSGIRVL YPVKMTFWFD IYKNIERIRH
201: VTCPVLVIHG TKDEVVNMSH GKKLWEISKD KYDPLWVKGG GHCNLESYPE YIKHLRKFIN AMEKLALNNP PTKQADDEPS ITKTKHNCCL RFRKK
001: MGNVTSNMAA KFAFFPPPPT YDVGKDEETG KLMFTGITPE KSMDVHQLTT KSGNKVIATF WKHPFSRFTL LYSHGNAADL GQMVDLFIEL RAHLRVNIMS
101: YDYSGYGAST GKPTELNTYY DIEAVYNCLR TEYGIMQEEM ILYGQSVGSG PTLHLASRVK RLRGIVLHSA ILSGLRVLYP VKMTFWFDMY KNIDKIRHVT
201: CPVLVIHGTK DDIVNMSHGK RLWELAKDKY DPLWVKGGGH CNLETYPEYI KHMRKFMNAM EKLALNNPPN KQQNDEPSIK ETKQNRCLRF SKR
101: YDYSGYGAST GKPTELNTYY DIEAVYNCLR TEYGIMQEEM ILYGQSVGSG PTLHLASRVK RLRGIVLHSA ILSGLRVLYP VKMTFWFDMY KNIDKIRHVT
201: CPVLVIHGTK DDIVNMSHGK RLWELAKDKY DPLWVKGGGH CNLETYPEYI KHMRKFMNAM EKLALNNPPN KQQNDEPSIK ETKQNRCLRF SKR
Arabidopsis Description
alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT2G24320]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.