CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31930	Canola	cytosol	39.49	96.88
KRG99188	Soybean	extracellular	24.84	37.14
CDY37505	Canola	cytosol, extracellular	11.46	26.87
CDX77081	Canola	plastid	35.03	26.07
CDY03421	Canola	cytosol	45.86	20.06
CDY34308	Canola	cytosol	45.86	19.67
GSMUA_Achr8P28640_001	Banana	plastid	45.86	19.62
CDY20302	Canola	cytosol	32.48	19.32
CDX91066	Canola	plastid	40.13	19.21
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	44.59	19.07
KRH03885	Soybean	cytosol, plastid	44.59	18.87
Zm00001d030601_P001	Maize	plastid	43.95	18.8
GSMUA_Achr9P02010_001	Banana	plastid	43.95	18.8
GSMUA_Achr3P17130_001	Banana	plastid	43.95	18.8
CDY13406	Canola	cytosol	34.39	18.37
CDX72285	Canola	cytosol	34.39	18.37
KRH57170	Soybean	plastid	43.31	18.33
CDY32850	Canola	cytosol	40.13	18.31
GSMUA_Achr9P07620_001	Banana	plastid	42.04	17.93
CDY46139	Canola	cytosol	28.66	17.86
CDX69584	Canola	endoplasmic reticulum	42.04	17.84
CDY09851	Canola	plastid	42.04	17.84
CDY28238	Canola	cytosol	33.12	17.69
CDY55247	Canola	cytosol	33.12	17.69
CDY51485	Canola	cytosol	33.12	17.69
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	40.13	17.45
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	40.13	17.45
CDY23273	Canola	cytosol	32.48	17.35
CDY34778	Canola	cytosol	32.48	17.35
CDX68717	Canola	cytosol	32.48	17.35
CDY20301	Canola	cytosol	32.48	17.29
Os12t0286600-01	Rice	cytosol, plastid	41.4	17.24
CDY27016	Canola	plastid	36.31	16.67
CDY51065	Canola	plastid	36.31	16.57
CDX86348	Canola	cytosol, nucleus, plastid	39.49	16.23
CDX85290	Canola	cytosol, nucleus, plastid	39.49	16.23
CDX98113	Canola	plastid	36.94	15.93
CDY35552	Canola	plastid	35.03	15.76
CDY56180	Canola	plastid	36.31	15.7
CDX92650	Canola	cytosol	43.31	15.67
CDY35777	Canola	cytosol	37.58	15.65
CDX85599	Canola	cytosol	24.2	14.56
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	29.3	14.07
CDY12257	Canola	plastid	34.39	13.14
CDY22593	Canola	plastid	34.39	13.14
CDY43012	Canola	plastid	34.39	12.53
CDY11031	Canola	cytosol, plastid	5.73	3.77
CDY45906	Canola	cytosol	1.91	1.35
KRG94364	Soybean	cytosol	0.64	0.72
CDY37504	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY53272	EnsemblPlantsGene:GSBRNA2T00010301001	ncoils:Coil	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	ProteinID:CDY53272
ProteinID:CDY53272.1	UniParc:UPI0004EE1854	UniProt:A0A078ITE0	MapMan:35.2	:	:

Description

BnaCnng24740DBnaCnng24740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITE0]

Coordinates

chrLK033181:+:60115..68194

Molecular Weight (calculated)

17358.2 Da

IEP (calculated)

7.795

GRAVY (calculated)

0.132

Length

157 amino acids

Sequence
(BLAST)

001: MRIAIFTSKC TKIFRSSCFN RISSPSYNVT CINGGLPDLF LMLALVVVPI RSSRVWETPK GGELMGVDML LLDEKLPDAE VCAFIVLKLI IFGKFRYGQS
101: SGKPSEQNTY ADIEAAYKCL EENYGAKQEN IILYQSIGSG PTVDLAARLL RSAGDLY

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.