CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033847.1-P	Field mustard	plastid	98.57	80.0
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	46.7	79.13
CDY43012	Canola	plastid	97.71	79.12
CDY22593	Canola	plastid	92.55	78.59
CDY12257	Canola	plastid	91.69	77.86
AT1G32190.1	Thale cress	plastid	90.83	75.12
GSMUA_Achr1P06250_001	Banana	plastid	65.62	67.95
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	64.76	66.28
TraesCS7A01G298400.1	Wheat	plastid	63.32	63.87
TraesCS7D01G294200.1	Wheat	plastid	63.04	63.58
TraesCS7B01G188600.1	Wheat	plastid	63.04	63.4
CDY20302	Canola	cytosol	46.7	61.74
PGSC0003DMT400006166	Potato	plasma membrane, plastid	67.91	60.77
EES14598	Sorghum	plastid	63.61	60.66
Solyc08g076350.2.1	Tomato	plastid	67.34	60.26
CDY34778	Canola	cytosol	50.72	60.2
KRH74343	Soybean	extracellular	69.91	59.95
CDY55247	Canola	cytosol	50.43	59.86
CDY37505	Canola	cytosol, extracellular	11.46	59.7
KRH39591	Soybean	extracellular, mitochondrion, nucleus	69.63	59.56
CDX68717	Canola	cytosol	50.14	59.52
CDY31930	Canola	cytosol	10.89	59.38
CDY20301	Canola	cytosol	49.86	58.98
CDY28238	Canola	cytosol	49.57	58.84
CDY13406	Canola	cytosol	49.28	58.5
CDY51485	Canola	cytosol	49.0	58.16
CDX72285	Canola	cytosol	49.0	58.16
Os08t0161500-01	Rice	plasma membrane	64.18	57.58
CDY23273	Canola	cytosol	48.42	57.48
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	45.56	57.4
CDY46139	Canola	cytosol	41.26	57.14
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	30.66	56.02
Zm00001d024530_P001	Maize	cytosol	60.74	50.0
CDY51065	Canola	plastid	48.71	49.42
CDY27016	Canola	plastid	48.42	49.42
CDX91066	Canola	plastid	44.99	47.87
HORVU7Hr1G070080.3	Barley	plastid	47.85	47.85
CDY32850	Canola	cytosol	46.99	47.67
CDX77081	Canola	plastid	28.37	46.92
CDY37504	Canola	cytosol	10.03	46.05
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	47.56	45.98
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	47.56	45.98
CDY03421	Canola	cytosol	46.42	45.13
CDX69584	Canola	endoplasmic reticulum	47.56	44.86
CDY09851	Canola	plastid	47.56	44.86
CDX85290	Canola	cytosol, nucleus, plastid	49.0	44.76
CDY35777	Canola	cytosol	47.85	44.3
CDY34308	Canola	cytosol	46.42	44.26
CDX86348	Canola	cytosol, nucleus, plastid	48.42	44.24
CDX98113	Canola	plastid	45.27	43.41
CDY56180	Canola	plastid	44.7	42.98
CDX85599	Canola	cytosol	29.8	39.85
CDX92650	Canola	cytosol	46.99	37.79
CDY53272	Canola	plastid	15.76	35.03
CDY11031	Canola	cytosol, plastid	21.78	31.8
CDY45906	Canola	cytosol	15.47	24.22

Protein Annotations

EnsemblPlants:CDY35552	EnsemblPlantsGene:GSBRNA2T00058613001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR12277
PANTHER:PTHR12277:SF45	ProteinID:CDY35552	ProteinID:CDY35552.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EDC38D
UniProt:A0A078HCP3	MapMan:35.2	:	:	:	:

Description

BnaA05g16340DBnaA05g16340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCP3]

Coordinates

chrLK032354:-:251462..253758

Molecular Weight (calculated)

39204.4 Da

IEP (calculated)

9.043

GRAVY (calculated)

-0.309

Length

349 amino acids

Sequence
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHVTKTHDG KLTAVSSSTS STFPAAGDAS LDVRVVKTRR GNKVIAFYLR NPNARLTLLY SHGNAADLGQ LFDLFLQLKV
101: NLRVNLMGYD YSGYGASTGK PSEYNTYADI EAVYECLQTE YGVGQEDLIL YGQSVGSGPT LHLASKLPRL RGVVLHSGIL SGLRVLCHVK FKFCCDIYSN
201: INKIKKVKCP VLVIHGTEDD VVNWLHGNRL WKMAKEPYEP LWIKGGGHCN LEIYPEYIRH LYRFIQDMEN TTTKSRLKKI WQELRRRDES KGCCSFRLCR
301: PKCTRCPKPS CDCSCGCCKW SCPSLKGCFS CWRREGETRG GTTMAKSEG

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.