Factsheet for VIT_02s0012g02180.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0149g00410.t01	Wine grape	cytosol	63.11	62.8
VIT_11s0206g00050.t01	Wine grape	cytosol	63.11	54.17
GSMUA_Achr1P06250_001	Banana	plastid	78.64	48.07
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	79.13	47.8
CDY35552	Canola	plastid	79.13	46.7
TraesCS7A01G298400.1	Wheat	plastid	77.67	46.24
TraesCS7D01G294200.1	Wheat	plastid	77.18	45.95
TraesCS7B01G188600.1	Wheat	plastid	77.18	45.82
Solyc08g076350.2.1	Tomato	plastid	85.44	45.13
PGSC0003DMT400006166	Potato	plasma membrane, plastid	84.95	44.87
EES14598	Sorghum	plastid	78.16	43.99
KRH74343	Soybean	extracellular	86.89	43.98
KRH39591	Soybean	extracellular, mitochondrion, nucleus	86.41	43.63
Os08t0161500-01	Rice	plasma membrane	77.67	41.13
CDY22593	Canola	plastid	78.64	39.42
Bra023247.1-P	Field mustard	plastid	78.16	39.17
CDY12257	Canola	plastid	78.16	39.17
AT1G32190.1	Thale cress	plastid	77.67	37.91
Bra033847.1-P	Field mustard	plastid	79.13	37.91
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.14	37.43
CDY43012	Canola	plastid	78.16	37.35
Zm00001d024530_P001	Maize	cytosol	74.76	36.32
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	62.62	35.05
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	61.16	32.56
VIT_01s0010g00670.t01	Wine grape	plastid	59.71	32.37
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	40.78	30.32
HORVU7Hr1G070080.3	Barley	plastid	49.03	28.94
VIT_14s0083g00800.t01	Wine grape	plastid	61.65	28.86
VIT_19s0015g01840.t01	Wine grape	plasma membrane	24.76	18.21
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	16.5	17.8

Protein Annotations

EntrezGene:100242080	wikigene:100242080	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	EMBL:AM484940
ProteinID:CAN79756	ProteinID:CAN79756.1	ProteinID:CCB57855	ProteinID:CCB57855.1	UniProt:F6HT45	EMBL:FN596247
InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100242080	wikigene:LOC100242080	PFAM:PF12146	PANTHER:PTHR12277
PANTHER:PTHR12277:SF45	SUPFAM:SSF53474	UniParc:UPI0002109943	ArrayExpress:VIT_02s0012g02180	EnsemblPlantsGene:VIT_02s0012g02180	EnsemblPlants:VIT_02s0012g02180.t01
unigene:Vvi.21997	RefSeq:XP_002276078	RefSeq:XP_002276078.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:8991156..8995034

Molecular Weight (calculated)

22651.4 Da

IEP (calculated)

7.493

GRAVY (calculated)

0.113

Length

206 amino acids

Sequence
(BLAST)

001: MGCMVSRLAA KFAFFPPSPA TYQVKKRDDG RLVAVSSSMP IPLADDSSLD VLLIDTKRGN KIVAFYLRNP YARLTLLYSH GNAADLGQLY DLFVQLKVNL
101: RVNLMGYDYS GYGASTGKPS ESNTYADIEA VYECLETEYG VSQEDLILYG QSVGSGPTLH LAAQLPRLRG VVLHSAILSG LRVLCHVKFT LCFDIYKFNH
201: IDLVGA

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.