Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- vacuole 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g00670.t01 | Wine grape | plastid | 37.86 | 27.89 |
| VIT_14s0006g02620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 30.36 | 24.85 |
| VIT_02s0012g02180.t01 | Wine grape | mitochondrion, vacuole | 18.21 | 24.76 |
| VIT_14s0219g00290.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 32.5 | 24.73 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 17.14 | 23.19 |
| VIT_17s0000g09740.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 31.07 | 22.48 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 18.21 | 21.25 |
| VIT_14s0083g00800.t01 | Wine grape | plastid | 31.43 | 20.0 |
Protein Annotations
| ArrayExpress:VIT_19s0015g01840 | EMBL:FN596747 | EnsemblPlants:VIT_19s0015g01840.t01 | EnsemblPlantsGene:VIT_19s0015g01840 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:AB_hydrolase | InterPro:IPR029058 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF77 | ProteinID:CBI39863 |
| ProteinID:CBI39863.3 | SUPFAM:SSF53474 | TMHMM:TMhelix | UniParc:UPI0001BE549C | UniProt:D7UAU8 | MapMan:35.2 |
Description
No Description!
Coordinates
chr19:+:10569070..10570617
Molecular Weight (calculated)
31503.3 Da
IEP (calculated)
9.575
GRAVY (calculated)
0.061
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MGWGYFQGYS AEICVIRLSC SLIHSISNNS NRCSLALHFL LFLIFMRITF LLSQTLMPLV FLMKAILFVI DNELPKSVRA LFGSVFSFNW KHANSLAKHH
101: KSQAESSTIV KALNHHDATI SQHPLFCILA YIAVLPSSLT TTVAAIILSH QHNYHAPPPS SSTTNLENVG VLKLCTKKWN KIVAVYVKNP STSLTALYSH
201: GNAANLGQMF NIFAELSLRI GVNLMGYDYS GYGQSSRKPI IHGMDDEILD RSHGKQLWEL YKEKYEPLWL KEGDSIRSRK
101: KSQAESSTIV KALNHHDATI SQHPLFCILA YIAVLPSSLT TTVAAIILSH QHNYHAPPPS SSTTNLENVG VLKLCTKKWN KIVAVYVKNP STSLTALYSH
201: GNAANLGQMF NIFAELSLRI GVNLMGYDYS GYGQSSRKPI IHGMDDEILD RSHGKQLWEL YKEKYEPLWL KEGDSIRSRK
001: MGAVTSSMAA KFAFFPPNPP SYGVEVVEGK LRLIGVENVK ENVEVLKLKT KRGNQVVAAY IKNPTASLTL LYSHGNAADL GQMFELFSEL SLHLRVNLIG
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
101: YDYSGYGRSS GKPSEQNTYS DIEAVYRCLE EKYGVKEQDV ILYGQSVGSG PTLELASRLP NLRAVVLHSA IASGLRVMYP VKRTYWFDIY KNVEKISFVK
201: CPVLVIHGTS DDVVNWSHGK QLFELCKEKY EPLWIKGGNH CDLELYPQYI KHLRKFVSAI EKSPILRNGP VPLTEKARSS TDIREPARPS TDQRDKSRTS
301: TDQREMPKLS TDIARASVDK RERTRRSVDG TEKPSNSAEQ QLVQPEKGRN SIDRFGEMIR SVGFCNIDCF KPTATAK
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LI62]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.