Factsheet for VIT_11s0206g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0149g00410.t01	Wine grape	cytosol	86.25	100.0
KRH20089	Soybean	cytosol	77.92	63.82
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	54.17	63.11
CDY20302	Canola	cytosol	68.75	62.5
Bra024028.1-P	Field mustard	cytosol	74.17	60.54
CDX72285	Canola	cytosol	74.17	60.54
GSMUA_Achr5P04500_001	Banana	cytosol	74.17	60.34
Bra011242.1-P	Field mustard	cytosol	73.75	60.2
CDX68717	Canola	cytosol	73.75	60.2
CDY13406	Canola	cytosol	73.75	60.2
CDY28238	Canola	cytosol	73.75	60.2
AT4G31020.2	Thale cress	cytosol	73.33	59.86
Solyc07g005130.2.1	Tomato	cytosol	73.33	59.66
PGSC0003DMT400008297	Potato	cytosol	73.33	59.66
TraesCS6A01G360000.1	Wheat	cytosol	67.92	59.06
CDY51485	Canola	cytosol	72.08	58.84
GSMUA_Achr11P...	Banana	cytosol	72.08	58.64
GSMUA_Achr9P13240_001	Banana	cytosol	72.08	58.64
TraesCS6B01G392900.1	Wheat	cytosol	67.92	58.63
TraesCS6D01G343000.1	Wheat	cytosol	67.92	58.63
Bra010259.1-P	Field mustard	cytosol	71.25	58.16
CDY23273	Canola	cytosol	71.25	58.16
AT2G24320.2	Thale cress	cytosol	70.42	57.68
CDY55247	Canola	cytosol	70.42	57.48
Bra007861.1-P	Field mustard	cytosol	70.0	57.14
CDY34778	Canola	cytosol	70.0	57.14
KRH12940	Soybean	cytosol	70.42	56.9
GSMUA_Achr3P04580_001	Banana	cytosol	69.58	56.61
CDY20301	Canola	cytosol	69.58	56.61
Bra032105.1-P	Field mustard	cytosol	69.17	56.46
Os02t0796600-01	Rice	cytosol	60.42	54.92
HORVU6Hr1G085730.5	Barley	mitochondrion	56.25	53.78
KXG31273	Sorghum	plastid	65.83	51.97
CDY46139	Canola	cytosol	50.42	48.02
VIT_14s0006g02620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	60.0	42.11
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	62.5	40.76
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	60.0	37.21
VIT_01s0010g00670.t01	Wine grape	plastid	57.5	36.32
VIT_14s0083g00800.t01	Wine grape	plastid	58.75	32.05
VIT_19s0015g01840.t01	Wine grape	plasma membrane	21.25	18.21

Protein Annotations

EntrezGene:100246614	wikigene:100246614	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	ProteinID:CBI18670
ProteinID:CBI18670.3	ProteinID:CCB49963	ProteinID:CCB49963.1	UniProt:D7SSN7	EMBL:FN594985	EMBL:FN595516
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Hydrolase_4	InterPro:IPR029058	EntrezGene:LOC100246614
wikigene:LOC100246614	PFAM:PF12146	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI0001BE14D7	ArrayExpress:VIT_11s0206g00050	EnsemblPlantsGene:VIT_11s0206g00050	EnsemblPlants:VIT_11s0206g00050.t01	RefSeq:XP_002270257	RefSeq:XP_002270257.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:+:7373416..7375644

Molecular Weight (calculated)

27023.6 Da

IEP (calculated)

7.602

GRAVY (calculated)

0.125

Length

240 amino acids

Sequence
(BLAST)

001: MGNVTSNVAA KFAFFPPDPP TYDVIREEDG RLVFSGLTAD KNVDVHLLDT KGGSKIVATF WRHPFARFTI LYSHGNAADL GQMQELFIEL RAHLRVNIMS
101: YDYSGYGAST GKPSEFNTYY DIEAVYNCLK REYGLKQEDV ILYGQSVGSG PTLHLASRSP KLRGVVLHSA ILSGIRVLYP VKMTFWFDIF KNIDKIRQVN
201: CPVLVIHVSS PFFAAEFLLT SIVLYIYVHF ICGAYCQLID

Best Arabidopsis Sequence Match ( AT2G24320.1 )
(BLAST)

001: MAAKFAFFPP PPTYDVGKDE ETGKLMFTGI TPEKSMDVHQ LTTKSGNKVI ATFWKHPFSR FTLLYSHGNA ADLGQMVDLF IELRAHLRVN IMSYDYSGYG
101: ASTGKPTELN TYYDIEAVYN CLRTEYGIMQ EEMILYGQSV GSGPTLHLAS RVKRLRGIVL HSAILSGLRV LYPVKMTFWF DMYKNIDKIR HVTCPVLVIH
201: GTKDDIVNMS HGKRLWELAK DKYDPLWVKG GGHCNLETYP EYIKHMRKFM NAMEKLALNN PPNKQQNDEP SIKETKQNRC LRFSKR

Arabidopsis Description

alpha/beta-Hydrolases superfamily protein [Source:TAIR;Acc:AT2G24320]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.