Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024028.1-P | Field mustard | cytosol | 99.66 | 99.66 |
| CDX72285 | Canola | cytosol | 98.64 | 98.64 |
| CDY28238 | Canola | cytosol | 94.9 | 94.9 |
| CDX68717 | Canola | cytosol | 94.56 | 94.56 |
| AT4G31020.2 | Thale cress | cytosol | 93.88 | 93.88 |
| CDY51485 | Canola | cytosol | 92.18 | 92.18 |
| CDY23273 | Canola | cytosol | 91.16 | 91.16 |
| CDY55247 | Canola | cytosol | 84.35 | 84.35 |
| CDY34778 | Canola | cytosol | 84.01 | 84.01 |
| VIT_11s0149g00410.t01 | Wine grape | cytosol | 58.5 | 83.09 |
| CDY20302 | Canola | cytosol | 74.15 | 82.58 |
| CDY20301 | Canola | cytosol | 82.65 | 82.37 |
| KRH20089 | Soybean | cytosol | 81.29 | 81.57 |
| Os02t0796600-01 | Rice | cytosol | 70.07 | 78.03 |
| GSMUA_Achr5P04500_001 | Banana | cytosol | 77.55 | 77.29 |
| PGSC0003DMT400008297 | Potato | cytosol | 77.21 | 76.95 |
| Solyc07g005130.2.1 | Tomato | cytosol | 76.87 | 76.61 |
| HORVU6Hr1G085730.5 | Barley | mitochondrion | 65.31 | 76.49 |
| GSMUA_Achr9P13240_001 | Banana | cytosol | 76.53 | 76.27 |
| GSMUA_Achr11P... | Banana | cytosol | 76.19 | 75.93 |
| KRH12940 | Soybean | cytosol | 76.53 | 75.76 |
| TraesCS6A01G360000.1 | Wheat | cytosol | 70.07 | 74.64 |
| TraesCS6B01G392900.1 | Wheat | cytosol | 70.41 | 74.46 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 70.41 | 74.46 |
| VIT_11s0206g00050.t01 | Wine grape | cytosol | 60.2 | 73.75 |
| CDY46139 | Canola | cytosol | 62.93 | 73.41 |
| GSMUA_Achr3P04580_001 | Banana | cytosol | 73.47 | 73.22 |
| KXG31273 | Sorghum | plastid | 72.11 | 69.74 |
| CDY31930 | Canola | cytosol | 13.27 | 60.94 |
| CDY37505 | Canola | cytosol, extracellular | 12.93 | 56.72 |
| CDY37504 | Canola | cytosol | 13.95 | 53.95 |
| CDX91066 | Canola | plastid | 59.52 | 53.35 |
| CDY32850 | Canola | cytosol | 59.86 | 51.16 |
| CDY51065 | Canola | plastid | 59.18 | 50.58 |
| CDY27016 | Canola | plastid | 58.5 | 50.29 |
| CDX77081 | Canola | plastid | 35.71 | 49.76 |
| CDY28862 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 60.54 | 49.31 |
| CDY28668 | Canola | cytosol, endoplasmic reticulum, nucleus, plastid | 60.54 | 49.31 |
| CDY35552 | Canola | plastid | 58.5 | 49.28 |
| CDX69584 | Canola | endoplasmic reticulum | 61.56 | 48.92 |
| CDY09851 | Canola | plastid | 61.56 | 48.92 |
| CDX85290 | Canola | cytosol, nucleus, plastid | 62.24 | 47.91 |
| CDY35777 | Canola | cytosol | 61.22 | 47.75 |
| CDX86348 | Canola | cytosol, nucleus, plastid | 61.9 | 47.64 |
| CDY03421 | Canola | cytosol | 58.16 | 47.63 |
| CDY34308 | Canola | cytosol | 58.5 | 46.99 |
| CDX98113 | Canola | plastid | 57.82 | 46.7 |
| CDY56180 | Canola | plastid | 56.8 | 46.01 |
| CDX85599 | Canola | cytosol | 39.46 | 44.44 |
| CDY12257 | Canola | plastid | 57.14 | 40.88 |
| CDY22593 | Canola | plastid | 56.8 | 40.63 |
| CDX92650 | Canola | cytosol | 59.86 | 40.55 |
| CDY43012 | Canola | plastid | 58.16 | 39.68 |
| CDY11031 | Canola | cytosol, plastid | 28.23 | 34.73 |
| CDY53272 | Canola | plastid | 18.37 | 34.39 |
| CDY45906 | Canola | cytosol | 21.09 | 27.8 |
Protein Annotations
| EnsemblPlants:CDY13406 | EnsemblPlantsGene:GSBRNA2T00077677001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | ProteinID:CDY13406 | ProteinID:CDY13406.1 | SEG:seg |
| SUPFAM:SSF53474 | UniParc:UPI0004EDDFF5 | UniProt:A0A078FJQ3 | MapMan:35.2 | : | : |
Description
BnaA03g51240DBnaA03g51240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJQ3]
Coordinates
chrLK032035:-:114786..116457
Molecular Weight (calculated)
33567.5 Da
IEP (calculated)
9.554
GRAVY (calculated)
-0.370
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNVASNVAA KFAFFPPEPP TYRVTDDEET GKLVLSGVSP DKNMEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYNCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT KDEIVDFSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLRKFINA MEKLSLTNPP PKELTNEPSI TETKHNKCLR FRKR
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYNCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT KDEIVDFSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLRKFINA MEKLSLTNPP PKELTNEPSI TETKHNKCLR FRKR
001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV
201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q84JV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.