CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35552	Canola	plastid	79.12	97.71
Bra033847.1-P	Field mustard	plastid	96.52	96.74
CDY22593	Canola	plastid	86.08	90.27
CDY12257	Canola	plastid	85.38	89.54
AT1G32190.1	Thale cress	plastid	85.15	86.97
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	37.35	78.16
GSMUA_Achr1P06250_001	Banana	plastid	53.83	68.84
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	53.13	67.16
TraesCS7A01G298400.1	Wheat	plastid	52.9	65.9
TraesCS7B01G188600.1	Wheat	plastid	52.9	65.71
TraesCS7D01G294200.1	Wheat	plastid	52.67	65.61
KRH74343	Soybean	extracellular	60.56	64.13
PGSC0003DMT400006166	Potato	plasma membrane, plastid	57.77	63.85
KRH39591	Soybean	extracellular, mitochondrion, nucleus	60.09	63.48
Solyc08g076350.2.1	Tomato	plastid	57.31	63.33
EES14598	Sorghum	plastid	53.6	63.11
Os08t0161500-01	Rice	plasma membrane	56.15	62.21
CDY37505	Canola	cytosol, extracellular	9.51	61.19
CDY20302	Canola	cytosol	37.35	60.98
CDY34778	Canola	cytosol	40.6	59.52
CDY31930	Canola	cytosol	8.82	59.38
CDY55247	Canola	cytosol	40.37	59.18
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	37.82	58.84
CDX68717	Canola	cytosol	40.14	58.84
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	25.99	58.64
CDY20301	Canola	cytosol	39.91	58.31
CDY28238	Canola	cytosol	39.68	58.16
CDY13406	Canola	cytosol	39.68	58.16
CDX72285	Canola	cytosol	39.44	57.82
CDY51485	Canola	cytosol	39.44	57.82
CDY23273	Canola	cytosol	38.98	57.14
CDY46139	Canola	cytosol	33.41	57.14
Zm00001d024530_P001	Maize	cytosol	51.74	52.59
CDY51065	Canola	plastid	39.68	49.71
CDY27016	Canola	plastid	39.44	49.71
HORVU7Hr1G070080.3	Barley	plastid	39.21	48.42
CDY32850	Canola	cytosol	38.05	47.67
CDX91066	Canola	plastid	36.19	47.56
CDX77081	Canola	plastid	23.2	47.39
CDY37504	Canola	cytosol	8.12	46.05
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	38.52	45.98
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	38.52	45.98
CDX85290	Canola	cytosol, nucleus, plastid	39.91	45.03
CDY09851	Canola	plastid	38.52	44.86
CDX69584	Canola	endoplasmic reticulum	38.52	44.86
CDY03421	Canola	cytosol	37.35	44.85
CDY35777	Canola	cytosol	38.98	44.56
CDX86348	Canola	cytosol, nucleus, plastid	39.44	44.5
CDY34308	Canola	cytosol	37.35	43.99
CDX98113	Canola	plastid	36.89	43.68
CDY56180	Canola	plastid	36.43	43.25
CDX85599	Canola	cytosol	24.13	39.85
CDX92650	Canola	cytosol	37.82	37.56
CDY53272	Canola	plastid	12.53	34.39
CDY11031	Canola	cytosol, plastid	17.4	31.38
CDY45906	Canola	cytosol	12.99	25.11

Protein Annotations

EnsemblPlants:CDY43012	EnsemblPlantsGene:GSBRNA2T00075824001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:IPR029058	PANTHER:PTHR12277
PANTHER:PTHR12277:SF45	ProteinID:CDY43012	ProteinID:CDY43012.1	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0004EEFF06
UniProt:A0A078HYQ8	MapMan:35.2	:	:	:	:

Description

BnaC05g28910DBnaC05g28910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYQ8]

Coordinates

chrLK032542:+:214007..216661

Molecular Weight (calculated)

47944.5 Da

IEP (calculated)

8.728

GRAVY (calculated)

-0.214

Length

431 amino acids

Sequence
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHVTTTPDG KLTAVSSSTS STFPAAGDAS LDVRVVKTRR GNKVTAFYLR NHNARLTLLY SHGNAADLGQ LFDLFLQLKV
101: NLRVNLMGYD YSGYGASTGK PSEYNTYADI EAVYECLQTE YGVGQEDLIL YGQSVGSGPT LHLASKLPRL RGVVLHSGIL SGLRVLCHVK FKFCCDIYSN
201: INKIKKVKCP VLVIHGTEDD VVNWLHGNRL WKMAKEPYEP LWIKGGGHCN LEIYPEYIRH LYRFIQDMEN TTTKSRLKKI WQEIRRRDES KGCCSFRLCR
301: PKCPRCPKPS CDCSCGCCKW SCPSLKGCFS CCKKPSCVSS CCKCSCLSLK GCFTCWKKPS CVSNCCFPKV KCCSCFGKPR CPKCSCWKCL KCPEPECCCC
401: AGCFSWLCCC GGGRRKEGET RGRTTMAKSG G

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.