CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
nucleus 1
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G298400.1	Wheat	plastid	85.79	90.75
TraesCS7B01G188600.1	Wheat	plastid	84.7	89.34
TraesCS7D01G294200.1	Wheat	plastid	84.43	89.31
Os08t0161500-01	Rice	plasma membrane	86.89	81.75
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	43.99	78.16
GSMUA_Achr1P06250_001	Banana	plastid	71.31	77.45
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	72.13	77.42
Zm00001d024530_P001	Maize	cytosol	86.34	74.53
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	36.89	70.68
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	49.73	65.7
CDY35552	Canola	plastid	60.66	63.61
PGSC0003DMT400006166	Potato	plasma membrane, plastid	66.39	62.31
Solyc08g076350.2.1	Tomato	plastid	65.85	61.79
KRH74343	Soybean	extracellular	65.57	58.97
KRH39591	Soybean	extracellular, mitochondrion, nucleus	65.57	58.82
HORVU7Hr1G070080.3	Barley	plastid	56.01	58.74
CDY12257	Canola	plastid	64.21	57.18
Bra023247.1-P	Field mustard	plastid	64.21	57.18
CDY22593	Canola	plastid	63.93	56.93
KXG31273	Sorghum	plastid	46.99	56.58
AT1G32190.1	Thale cress	plastid	63.39	54.98
Bra033847.1-P	Field mustard	plastid	63.66	54.19
CDY43012	Canola	plastid	63.11	53.6
OQU76743	Sorghum	cytosol, mitochondrion	42.35	49.05
EES01292	Sorghum	plastid	46.45	45.95
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	43.99	43.87
EES06425	Sorghum	plastid	48.91	43.77
KXG25721	Sorghum	cytosol	44.54	39.56

Protein Annotations

EnsemblPlants:EES14598	EnsemblPlantsGene:SORBI_3007G050800	EntrezGene:8069638	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058	PANTHER:PTHR12277
PANTHER:PTHR12277:SF45	PFAM:PF12146	ProteinID:EES14598	ProteinID:EES14598.1	RefSeq:XP_002445103.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0001A87C58	UniProt:C5YHD9	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr7:-:5177338..5184833

Molecular Weight (calculated)

40699.4 Da

IEP (calculated)

8.835

GRAVY (calculated)

-0.118

Length

366 amino acids

Sequence
(BLAST)

001: MLSGCSVSSL AARFAFFPPE PATYAVRKDE ATGRLVASGV PRDNALDVLL VDTARGNKVV AFYFRNPCAR LTLLYSHGNA ADLGQLYDLF VQLKVNLKIN
101: LMGYDYSGYG ASTGKPSEEN TYADIEAVYQ CLETEYGISQ EDIILYGQSV GSGPTLHLAS RLPRLRGVVL HSAILSGLRV VCHVNFTFCF DIYKNVKKIK
201: KVKCPVLVIH GTDDDVVNWS HGKELWKLAR DPYDPLWIKG GGHCNLELYP DFIRHLSRFI REMENITTKI RLKKIRPSLQ LPRKKAHHRA NTATTTTFTA
301: NCCCRIRVRK PTCPSCNFSC GGCCGLRNCF TFRFSRCCRP PTCFTGGGGC CSCRSCFKCC CCGDGR

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.