Factsheet for GSMUA_Achr7P17430_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06250_001	Banana	plastid	87.68	88.72
VIT_02s0012g02180.t01	Wine grape	mitochondrion, vacuole	47.8	79.13
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	44.28	79.06
TraesCS7A01G298400.1	Wheat	plastid	77.71	76.59
TraesCS7D01G294200.1	Wheat	plastid	76.83	75.72
TraesCS7B01G188600.1	Wheat	plastid	76.83	75.5
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	59.82	73.65
EES14598	Sorghum	plastid	77.42	72.13
Os08t0161500-01	Rice	plasma membrane	77.13	67.61
CDY35552	Canola	plastid	66.28	64.76
PGSC0003DMT400006166	Potato	plasma membrane, plastid	70.09	61.28
Solyc08g076350.2.1	Tomato	plastid	69.79	61.03
GSMUA_Achr5P04500_001	Banana	cytosol	52.79	61.02
GSMUA_Achr9P13240_001	Banana	cytosol	51.91	60.0
GSMUA_Achr3P04580_001	Banana	cytosol	51.32	59.32
GSMUA_Achr11P...	Banana	cytosol	50.44	58.31
Zm00001d024530_P001	Maize	cytosol	72.43	58.25
KRH74343	Soybean	extracellular	69.5	58.23
KRH39591	Soybean	extracellular, mitochondrion, nucleus	68.92	57.6
Bra023247.1-P	Field mustard	plastid	66.86	55.47
CDY22593	Canola	plastid	66.86	55.47
CDY12257	Canola	plastid	66.86	55.47
GSMUA_Achr9P22720_001	Banana	plastid	16.42	54.9
Bra033847.1-P	Field mustard	plastid	67.74	53.72
AT1G32190.1	Thale cress	plastid	66.28	53.55
CDY43012	Canola	plastid	67.16	53.13
HORVU7Hr1G070080.3	Barley	plastid	53.96	52.72
GSMUA_Achr10P...	Banana	plastid	52.49	50.56
GSMUA_Achr8P17940_001	Banana	plastid	50.15	49.85
GSMUA_Achr9P02010_001	Banana	plastid	48.68	45.23
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	51.03	45.19
GSMUA_Achr3P17130_001	Banana	plastid	48.39	44.96
GSMUA_Achr9P07620_001	Banana	plastid	46.33	42.93
GSMUA_Achr8P28640_001	Banana	plastid	46.04	42.78
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	36.66	38.23

Protein Annotations

EnsemblPlants:GSMUA_Achr7P17430_001	EnsemblPlants:GSMUA_Achr7T17430_001	EnsemblPlantsGene:GSMUA_Achr7G17430_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF45	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI00029534FC	UniProt:M0TID0	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G17430_001]

Coordinates

chr7:-:19590187..19595341

Molecular Weight (calculated)

37873.5 Da

IEP (calculated)

8.869

GRAVY (calculated)

-0.194

Length

341 amino acids

Sequence
(BLAST)

001: MFSGCSVSSL AARFAFFPPD PPTYSVKKDD GGRLAASGVP RDHSMDVLVL DTKNGNKIVA FYLKNPCARL TVLYSHGNAA DLGRLYDLFV QLKVNLRVNL
101: MGYDYSGYGA STGKPSEYNT YADIEAVYQC LQTEYGVSQE DLILYGQSVG SGPTLHLAAR LPRLRGVVLH SAILSGLRVV CHVNFNFCFD IYKNINKIKK
201: VKCPVFAVHG TEDDVVNWLH GHGLWKLAKE PYEPLWIKGG GHCNLELYPD YIRHLRKFIQ EMENITTATR LKKIRQTLKS PTKPVATTSA ATTTSFTANC
301: CCRIRFRKPD FPSCSSRRCP TVQCSNGSAY LCNWCCGGDG H

Best Arabidopsis Sequence Match ( AT1G32190.1 )
(BLAST)

001: MGCMFSHLAA KFAFFPPSPP TYHLTKTPDG KLSAVSSASS SSSTFPSAGD PSLDVKVVKT RRGNKVTAFY LRNPNARLTL LYSHGNAADL GQLFDLFVQL
101: KVNLRVNLMG YDYSGYGAST GKPSEYDTYA DIEAAYECLQ TDYGVGQEDL ILYGQSVGSG PTLHLASKLP RLRGVVLHSG ILSGLRVLCH VKFKFCCDIY
201: SNVNKIKKVK CPVLVIHGTE DDVVNWLHGN RLWKMAKEPY EPLWIKGGGH CNLEIYPDYI RHLYRFIQDM ENTTTKSRLK TIWQEIRRRD ESTGCCCSGL
301: CRPSCSCPKP RCPKPSCSCG CGCGDCGCFK CSCPTLKGCF SCCKKPSCVS SCCCPTFKCS SCFGKPKCPK CSCWKCLKCP DTECCRSSCC CSGCFSWLCC
401: CGGGRRKEGE RRGSTTLEKS EG

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FVR4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.