Factsheet for GSMUA_Achr9P22720_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 2
nucleus 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068318	Potato	plastid	67.65	61.06
Bra040729.1-P	Field mustard	plastid	58.82	53.1
Solyc02g065700.2.1	Tomato	cytosol	71.57	25.98
PGSC0003DMT400068320	Potato	cytosol	67.65	24.56
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	83.33	22.08
GSMUA_Achr10P...	Banana	plastid	72.55	20.9
Solyc02g089320.2.1	Tomato	plastid	72.55	20.61
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	70.59	20.34
GSMUA_Achr8P28640_001	Banana	plastid	72.55	20.16
GSMUA_Achr3P17130_001	Banana	plastid	71.57	19.89
GSMUA_Achr9P02010_001	Banana	plastid	71.57	19.89
GSMUA_Achr9P07620_001	Banana	plastid	70.59	19.57
PGSC0003DMT400003495	Potato	plastid	71.57	19.36
GSMUA_Achr9P13240_001	Banana	cytosol	55.88	19.32
GSMUA_Achr3P04580_001	Banana	cytosol	55.88	19.32
CDY35777	Canola	cytosol	70.59	19.1
KRH18325	Soybean	cytosol, nucleus, peroxisome	70.59	19.05
GSMUA_Achr8P17940_001	Banana	plastid	62.75	18.66
KRG93729	Soybean	cytosol	68.63	18.52
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	68.63	18.37
GSMUA_Achr11P...	Banana	cytosol	52.94	18.31
GSMUA_Achr5P04500_001	Banana	cytosol	52.94	18.31
KRH01428	Soybean	plastid	67.65	18.16
CDX86348	Canola	cytosol, nucleus, plastid	67.65	18.06
CDX85290	Canola	cytosol, nucleus, plastid	67.65	18.06
VIT_01s0010g00670.t01	Wine grape	plastid	65.69	17.63
AT3G30380.1	Thale cress	cytosol	68.63	17.54
KRH45145	Soybean	plastid	64.71	17.28
GSMUA_Achr1P06250_001	Banana	plastid	55.88	16.91
AT1G13610.1	Thale cress	plastid	58.82	16.76
CDY56180	Canola	plastid	58.82	16.53
CDX98113	Canola	plastid	58.82	16.48
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	54.9	16.42
VIT_14s0083g00800.t01	Wine grape	plastid	66.67	15.45
PGSC0003DMT400050553	Potato	cytosol	50.98	14.02
Solyc05g010680.1.1	Tomato	cytosol	48.04	12.79
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	8.82	2.75
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	2.94	1.57
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	3.92	1.44
Bra019712.1-P	Field mustard	cytosol	0.98	0.37
CDY45906	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr9P22720_001	EnsemblPlants:GSMUA_Achr9T22720_001	EnsemblPlantsGene:GSMUA_Achr9G22720_001	PANTHER:PTHR12277	PANTHER:PTHR12277:SF124	SEG:seg
UniParc:UPI000296EDB5	UniProt:M0U2N1	MapMan:35.2	:	:	:

Description

Putative Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G22720_001]

Coordinates

chr9:-:27813204..27813512

Molecular Weight (calculated)

10976.4 Da

IEP (calculated)

8.225

GRAVY (calculated)

0.163

Length

102 amino acids

Sequence
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYGVVVADAA AGRLEMTEVP ARENVEVRRL RTRRGTEIVA MYVKNPAASL TVLYSHGNAA DLGQMFELFC ELSKHLCVNL
101: MG

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.