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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P22720_001 Banana plastid 53.1 58.82
Bra014940.1-P Field mustard cytosol 38.94 54.32
Bra004197.1-P Field mustard cytosol 37.17 51.85
CDX98113 Canola plastid 95.58 29.67
Bra037774.1-P Field mustard cytosol 54.87 22.79
Bra034043.1-P Field mustard cytosol 54.87 22.79
Bra030401.1-P Field mustard cytosol 54.87 22.79
AT1G13610.1 Thale cress plastid 71.68 22.63
Bra028401.1-P Field mustard plastid 54.87 18.02
VIT_01s0010g00670.t01 Wine grape plastid 60.18 17.89
Bra020738.1-P Field mustard cytosol, nucleus, plastid 55.75 17.8
Bra024028.1-P Field mustard cytosol 46.02 17.69
Bra007861.1-P Field mustard cytosol 45.13 17.35
Bra010259.1-P Field mustard cytosol 45.13 17.35
Bra011242.1-P Field mustard cytosol 45.13 17.35
GSMUA_Achr10P... Banana plastid 53.98 17.23
Bra032105.1-P Field mustard cytosol 44.25 17.01
Bra013831.1-P Field mustard cytosol 54.87 16.94
Bra025415.1-P Field mustard cytosol, nucleus, plastid 54.87 16.27
Bra008761.1-P Field mustard endoplasmic reticulum 53.1 16.22
GSMUA_Achr3P28090_001 Banana cytosol, nucleus, plastid 52.21 15.32
Os02t0190800-01 Rice plasma membrane 49.56 14.4
TraesCS7D01G386800.1 Wheat plastid 48.67 14.36
TraesCS7B01G293000.1 Wheat plastid 48.67 14.36
TraesCS7A01G391300.1 Wheat plastid 48.67 14.36
TraesCS6A01G170900.1 Wheat plastid 49.56 14.14
PGSC0003DMT400050553 Potato cytosol 46.02 14.02
TraesCS6D01G160600.1 Wheat plastid 48.67 13.96
HORVU6Hr1G034870.2 Barley plastid 48.67 13.78
TraesCS6B01G199000.1 Wheat plastid 47.79 13.71
EES06425 Sorghum plastid 49.56 13.69
HORVU7Hr1G092460.1 Barley plastid 48.67 13.25
KXG25721 Sorghum cytosol 47.79 13.11
Solyc05g010680.1.1 Tomato cytosol 44.25 13.05
Zm00001d015656_P001 Maize plastid 49.56 12.96
TraesCS7B01G196600.1 Wheat cytosol 46.9 12.93
Zm00001d046660_P001 Maize plastid 47.79 12.83
TraesCS7D01G284300.3 Wheat cytosol 46.02 12.68
Zm00001d052810_P001 Maize cytosol 46.02 12.44
Bra023247.1-P Field mustard plastid 43.36 11.92
HORVU7Hr1G061990.5 Barley cytosol, nucleus, plastid 46.9 11.86
Bra033847.1-P Field mustard plastid 44.25 11.63
Bra019211.1-P Field mustard nucleus 55.75 11.41
OQU76743 Sorghum cytosol, mitochondrion 27.43 9.81
Bra040701.1-P Field mustard plastid 17.7 6.15
Zm00001d012172_P001 Maize mitochondrion 12.39 5.98
Bra019712.1-P Field mustard cytosol 4.42 1.87
Bra023463.1-P Field mustard cytosol 3.54 1.45
Zm00001d053705_P001 Maize cytosol 0.88 0.46
Protein Annotations
EnsemblPlants:Bra040729.1EnsemblPlants:Bra040729.1-PEnsemblPlantsGene:Bra040729PANTHER:PTHR12277PANTHER:PTHR12277:SF77UniParc:UPI000253E7EA
UniProt:M4FI00MapMan:35.2::::
Description
AT1G13610 (E=2e-039) | INVOLVED IN: biological_process unknown; EXPRESSED IN: cotyledon, hypocotyl, root; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30380.2); Has 3358 Blast hits to 3354 proteins in 579 species: Archae - 6; Bacteria - 974; Metazoa - 587; Fungi - 165; Plants - 174; Viruses - 11; Other Eukaryotes - 1441 (source: NCBI BLink).
Coordinates
chrScaffold000240:+:55782..56123
Molecular Weight (calculated)
12828.7 Da
IEP (calculated)
8.819
GRAVY (calculated)
-0.101
Length
113 amino acids
Sequence
(BLAST)
001: MGTATSTMAA KLAFFPPNPP SYTVVTDEST GKMRISAEMM RHRRDEEIEV VKIMTRRGNE IVGMYIKHPT AKLTVLYSHG NATDIGQMFI IYNELSHHLN
101: VNLMGLVYTI YVY
Best Arabidopsis Sequence Match ( AT1G13610.1 )
(BLAST)
001: MGIATSTMAA KLAFFPPNPP SYTVVTEEST GKMMISTNLP HYLRDENIEV VKIRTKRGNE IVAMYVKNPT AKLTVLFSHG NASDLAQIFY ILAELIQLNV
101: NLMGYDYSGY GQSSGKPSEQ DTYADIEAAY NWLRQTYGTK DERIILYGQS VGSGPSLELA SRLPRLRALV LHSPFLSGLR VMYPVKHSFP FDIYKNIDKI
201: HLVECPVLVI HGTDDDVVNI SHGKHLWGLC KEKYEPLWLK GRGHSDIEMS PEYLPHLRKF ISAIEKLPVP KFRRQSLAND HKNDKSTKSS WIGSRHSIEC
301: VPPRDKSRKI SIDHRFGKPR NSVGSSDRAR NSFDRLGEMV RSVRLCNVDC VKNAVAEV
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ68]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.