Factsheet for TraesCS6D01G160600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G170900.1	Wheat	plastid	99.24	98.74
TraesCS6B01G199000.1	Wheat	plastid	98.22	98.22
HORVU6Hr1G034870.2	Barley	plastid	98.48	97.24
TraesCS7D01G386800.1	Wheat	plastid	79.44	81.72
Solyc02g065700.2.1	Tomato	cytosol	48.73	68.33
GSMUA_Achr10P...	Banana	plastid	61.17	68.08
PGSC0003DMT400068320	Potato	cytosol	47.97	67.26
TraesCS6D01G343000.1	Wheat	cytosol	45.69	64.75
Solyc02g089320.2.1	Tomato	plastid	58.63	64.35
KRH18325	Soybean	cytosol, nucleus, peroxisome	61.68	64.29
PGSC0003DMT400003495	Potato	plastid	61.42	64.19
KRG93729	Soybean	cytosol	61.42	64.02
Bra020738.1-P	Field mustard	cytosol, nucleus, plastid	56.85	63.28
CDY35777	Canola	cytosol	59.9	62.6
Bra025415.1-P	Field mustard	cytosol, nucleus, plastid	60.15	62.2
VIT_01s0010g00670.t01	Wine grape	plastid	59.9	62.11
KRH01428	Soybean	plastid	59.9	62.11
CDX85290	Canola	cytosol, nucleus, plastid	60.15	62.04
CDX86348	Canola	cytosol, nucleus, plastid	59.9	61.78
KRH45145	Soybean	plastid	59.64	61.52
Bra019712.1-P	Field mustard	cytosol	40.1	58.96
CDX98113	Canola	plastid	53.3	57.69
AT3G30380.1	Thale cress	cytosol	58.38	57.64
PGSC0003DMT400068318	Potato	plastid	16.5	57.52
AT1G13610.1	Thale cress	plastid	51.78	56.98
CDY56180	Canola	plastid	52.28	56.75
TraesCS3D01G262400.2	Wheat	plastid	51.02	55.83
TraesCS7D01G284300.3	Wheat	cytosol	57.87	55.61
VIT_14s0083g00800.t01	Wine grape	plastid	59.64	53.41
PGSC0003DMT400050553	Potato	cytosol	49.75	52.83
Solyc05g010680.1.1	Tomato	cytosol	51.02	52.48
TraesCS7D01G294200.1	Wheat	plastid	45.69	52.02
CDY45906	Canola	cytosol	27.66	48.88
Bra040729.1-P	Field mustard	plastid	13.96	48.67

Protein Annotations

EnsemblPlants:TraesCS6D01G160600.1	EnsemblPlantsGene:TraesCS6D01G160600	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
PANTHER:PTHR12277	PANTHER:PTHR12277:SF70	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr6D:+:138904478..138909291

Molecular Weight (calculated)

43472.5 Da

IEP (calculated)

9.273

GRAVY (calculated)

-0.574

Length

394 amino acids

Sequence
(BLAST)

001: MGGVTSTVAA RFAFFPPSPP SYGIQPLPPP DAAGAAAGEA KGKEGSVVVE LTGVPRRANV EARRLRTKRG TDVVAMYARQ TGAKLTLLYS HGNAADLGQM
101: YELFVELSAH LNVNLMGYDY SGYGQSSGKP SEQNTYADIE AVYRCLIETY AASEENIILY GQSVGSGPTL DLASRLPRLR AVVVHSPILS GLRVMYPVKH
201: TYWFDIYKNI DKIPQVSCPV LVIHGTADEV VDCSHGRALW ELAKVKYEPL WVKGGNHCNL ELYPEYIKHL KKFVGAIEKL PAPSDESPES SGASDRTQTE
301: PEGTEEPRKS VDHREKTRPS IDHRKSTDRR DKPRGSTDRR DKSRKSVDNP DRPRASVDQP DRPRKSVDRF GGMMKAVRLR NIDCFKVPTT SSGS

Best Arabidopsis Sequence Match ( AT3G01690.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPP SYKVVTDELT GLLLLSPFPH RENVEIVKLR TRRGTEIVGM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHNTY ADIEAVYKCL EETFGSKQEG VILYGQSVGS GPTLDLASRL PQLRAVVLHS PILSGLRVMY SVKKTYWFDI YKNIDKIPYV
201: DCPVLIIHGT SDEVVDCSHG KQLWELCKDK YEPLWVKGGN HCDLEHYPEY IRHLKKFIAT VERLPCPRMS SDQSERVRDA PPRRSMDRRV KPRQSTERRE
301: KEKPPKSQSK MSSSSSKLKI SFDQLDRSRR SVDCHEKTRK SVDQIERGRK SVDRLDRVRS E

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9S7U7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.