Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G064120.3 | Barley | plastid | 99.17 | 98.62 |
| TraesCS3B01G295700.1 | Wheat | plastid | 99.17 | 98.35 |
| TraesCS3A01G262400.1 | Wheat | plastid | 99.17 | 98.08 |
| Os01t0689800-01 | Rice | plastid | 89.72 | 88.74 |
| Zm00001d011624_P001 | Maize | plastid | 86.39 | 84.05 |
| EES01292 | Sorghum | plastid | 86.39 | 84.05 |
| Zm00001d043801_P002 | Maize | plastid | 85.0 | 82.7 |
| AT1G66900.1 | Thale cress | cytosol | 55.0 | 72.79 |
| GSMUA_Achr8P17940_001 | Banana | plastid | 64.72 | 67.93 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 63.89 | 67.85 |
| Solyc02g086220.2.1 | Tomato | cytosol, plastid | 63.33 | 67.06 |
| VIT_14s0006g02620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 63.33 | 66.67 |
| PGSC0003DMT400006272 | Potato | plastid | 62.5 | 65.98 |
| Solyc03g034270.2.1 | Tomato | plastid | 61.67 | 65.29 |
| KRH18213 | Soybean | plastid | 63.33 | 64.59 |
| Bra014940.1-P | Field mustard | cytosol | 14.44 | 64.2 |
| KRG93935 | Soybean | plastid | 62.78 | 63.84 |
| CDY27016 | Canola | plastid | 60.28 | 63.45 |
| AT5G38220.1 | Thale cress | cytosol | 59.17 | 63.39 |
| CDY51065 | Canola | plastid | 60.56 | 63.37 |
| TraesCS6D01G343000.1 | Wheat | cytosol | 48.33 | 62.59 |
| Bra004197.1-P | Field mustard | cytosol | 13.89 | 61.73 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 62.78 | 57.07 |
| TraesCS7D01G386800.1 | Wheat | plastid | 56.39 | 53.0 |
| TraesCS6D01G160600.1 | Wheat | plastid | 55.83 | 51.02 |
| TraesCS7D01G294200.1 | Wheat | plastid | 47.78 | 49.71 |
| TraesCS7D01G284300.3 | Wheat | cytosol | 54.72 | 48.05 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G262400.2 | EnsemblPlantsGene:TraesCS3D01G262400 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | PFAM:PF12146 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:-:363869265..363872198
Molecular Weight (calculated)
40095.8 Da
IEP (calculated)
9.621
GRAVY (calculated)
-0.440
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSTIAA RFAFFPPTPP SYTVVADAAT GRLLIPEISR PPARRRRRDG GGDSSAAAEE EDATEVVRLR TRRGNEIVAV YVRHARASAT LLYSHGNAAD
101: LGQMYGLFVE LSRRLRVNIF GYDYAGYGRS TGKPTEYNTY ADIEAAYNCL KEKYGVPDED IILYGQSVGS GPTIDLASRL PNLRAVVLHS PILSGLRVLY
201: PVKKTFWFDI YKNVDKISLV NCPVLVIHGT SDDVVDWSHG KQLWELCKVK HSPLWLSGGG HCNLELYPDY IRHLKKFVSS LGKKSTKPDL KELPATEDTS
301: RKDAESVSSD KPQEAAKCRQ ISRKSLDSRV GKSKTVDAPE KPRMSSDDVD KFRRRRCLVW
101: LGQMYGLFVE LSRRLRVNIF GYDYAGYGRS TGKPTEYNTY ADIEAAYNCL KEKYGVPDED IILYGQSVGS GPTIDLASRL PNLRAVVLHS PILSGLRVLY
201: PVKKTFWFDI YKNVDKISLV NCPVLVIHGT SDDVVDWSHG KQLWELCKVK HSPLWLSGGG HCNLELYPDY IRHLKKFVSS LGKKSTKPDL KELPATEDTS
301: RKDAESVSSD KPQEAAKCRQ ISRKSLDSRV GKSKTVDAPE KPRMSSDDVD KFRRRRCLVW
001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.