Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27016 | Canola | plastid | 91.96 | 90.35 |
| CDY51065 | Canola | plastid | 91.67 | 89.53 |
| Bra028401.1-P | Field mustard | plastid | 91.67 | 89.53 |
| AT1G66900.1 | Thale cress | cytosol | 66.96 | 82.72 |
| VIT_14s0006g02620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 81.25 | 79.82 |
| PGSC0003DMT400067845 | Potato | cytosol, plastid | 77.98 | 77.29 |
| Solyc02g086220.2.1 | Tomato | cytosol, plastid | 77.38 | 76.47 |
| KRH18213 | Soybean | plastid | 77.38 | 73.65 |
| PGSC0003DMT400006272 | Potato | plastid | 73.81 | 72.73 |
| KRG93935 | Soybean | plastid | 76.49 | 72.6 |
| Solyc03g034270.2.1 | Tomato | plastid | 72.32 | 71.47 |
| GSMUA_Achr8P17940_001 | Banana | plastid | 66.67 | 65.31 |
| PGSC0003DMT400062645 | Potato | mitochondrion | 73.81 | 62.63 |
| Os01t0689800-01 | Rice | plastid | 65.48 | 60.44 |
| AT4G31020.2 | Thale cress | cytosol | 52.08 | 59.52 |
| EES01292 | Sorghum | plastid | 65.48 | 59.46 |
| Zm00001d011624_P001 | Maize | plastid | 65.18 | 59.19 |
| TraesCS3D01G262400.2 | Wheat | plastid | 63.39 | 59.17 |
| Zm00001d043801_P002 | Maize | plastid | 64.88 | 58.92 |
| TraesCS3B01G295700.1 | Wheat | plastid | 63.39 | 58.68 |
| HORVU3Hr1G064120.3 | Barley | plastid | 63.1 | 58.56 |
| TraesCS3A01G262400.1 | Wheat | plastid | 63.39 | 58.52 |
| AT2G24320.2 | Thale cress | cytosol | 50.6 | 58.02 |
| AT3G01690.1 | Thale cress | cytosol, plastid | 61.01 | 56.79 |
| AT4G24760.1 | Thale cress | cytosol, nucleus, plastid | 60.71 | 55.89 |
| AT5G14390.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 61.31 | 55.83 |
| AT3G30380.1 | Thale cress | cytosol | 60.42 | 50.88 |
| AT1G13610.1 | Thale cress | plastid | 50.89 | 47.77 |
| AT1G32190.1 | Thale cress | plastid | 49.4 | 39.34 |
| Zm00001d042401_P001 | Maize | plastid | 48.81 | 33.88 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:833804 | InterPro:AB_hydrolase | ProteinID:AED94282.1 | ProteinID:AED94284.1 |
| ArrayExpress:AT5G38220 | EnsemblPlantsGene:AT5G38220 | RefSeq:AT5G38220 | TAIR:AT5G38220 | RefSeq:AT5G38220-TAIR-G | EnsemblPlants:AT5G38220.1 |
| TAIR:AT5G38220.1 | ProteinID:BAB11289.1 | EMBL:BT003886 | EMBL:BT004957 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0016787 | InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_001031978.1 | RefSeq:NP_198638.2 |
| PFAM:PF12146 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR12277 | PANTHER:PTHR12277:SF118 | UniProt:Q9FF34 | MEROPS:S09.A25 |
| SUPFAM:SSF53474 | UniParc:UPI000000C1C2 | SEG:seg | : | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
Coordinates
chr5:+:15268674..15271456
Molecular Weight (calculated)
37405.8 Da
IEP (calculated)
9.398
GRAVY (calculated)
-0.415
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.