Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 1
  • plastid 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P00560_001
GSMUA_Achr2P12040_001
GSMUA_Achr2P18250_001
GSMUA_Achr4P21690_001
GSMUA_Achr4P30100_001
GSMUA_Achr4P33210_001
GSMUA_Achr7P00390_001
GSMUA_Achr8P14860_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G38220.1 GSMUA_Achr4P33210_001 AT1G30860.1 21798944
AT5G38220.1 GSMUA_Achr7P00390_001 AT1G30860.1 21798944
AT5G38220.1 GSMUA_Achr1P00560_001 AT4G17680.1 21798944
AT5G38220.1 GSMUA_Achr2P12040_001 AT4G17680.1 21798944
AT5G38220.1 GSMUA_Achr2P18250_001 AT4G17680.1 21798944
AT5G38220.1 GSMUA_Achr4P21690_001 AT4G17680.1 21798944
AT5G38220.1 GSMUA_Achr4P30100_001 AT4G17680.1 21798944
AT5G38220.1 GSMUA_Achr8P14860_001 AT4G17680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G66900.1 Thale cress cytosol 57.73 72.79
VIT_14s0006g02620.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 69.68 69.88
PGSC0003DMT400067845 Potato cytosol, plastid 68.22 69.03
Solyc02g086220.2.1 Tomato cytosol, plastid 67.35 67.94
CDY51065 Canola plastid 67.06 66.86
AT5G38220.1 Thale cress cytosol 65.31 66.67
Bra014940.1-P Field mustard cytosol 15.74 66.67
CDY27016 Canola plastid 66.47 66.67
PGSC0003DMT400006272 Potato plastid 66.18 66.57
KRG93935 Soybean plastid 67.93 65.82
KRH18213 Soybean plastid 67.64 65.72
Bra004197.1-P Field mustard cytosol 15.45 65.43
Os01t0689800-01 Rice plastid 69.39 65.38
Solyc03g034270.2.1 Tomato plastid 64.72 65.29
TraesCS3D01G262400.2 Wheat plastid 67.93 64.72
TraesCS3B01G295700.1 Wheat plastid 68.22 64.46
HORVU3Hr1G064120.3 Barley plastid 67.93 64.36
TraesCS3A01G262400.1 Wheat plastid 68.22 64.29
EES01292 Sorghum plastid 68.8 63.78
Zm00001d043801_P002 Maize plastid 68.22 63.24
GSMUA_Achr9P22720_001 Banana plastid 18.66 62.75
Zm00001d011624_P001 Maize plastid 67.64 62.7
GSMUA_Achr5P04500_001 Banana cytosol 52.77 61.36
GSMUA_Achr9P13240_001 Banana cytosol 51.9 60.34
GSMUA_Achr3P04580_001 Banana cytosol 51.6 60.0
GSMUA_Achr11P... Banana cytosol 51.31 59.66
GSMUA_Achr9P02010_001 Banana plastid 63.56 59.4
GSMUA_Achr10P... Banana plastid 61.22 59.32
GSMUA_Achr3P17130_001 Banana plastid 62.68 58.58
PGSC0003DMT400062645 Potato mitochondrion 66.18 57.32
GSMUA_Achr8P28640_001 Banana plastid 61.22 57.22
GSMUA_Achr9P07620_001 Banana plastid 61.22 57.07
GSMUA_Achr3P28090_001 Banana cytosol, nucleus, plastid 60.06 53.51
GSMUA_Achr1P06250_001 Banana plastid 49.85 50.74
GSMUA_Achr7P17430_001 Banana cytosol, plastid 49.85 50.15
GSMUA_Achr9P22710_001 Banana endoplasmic reticulum, golgi 42.86 44.95
GSMUA_Achr1P06210_001 Banana extracellular, plasma membrane 32.36 40.07
GSMUA_Achr1P06220_001 Banana cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid 19.83 35.6
Zm00001d042401_P001 Maize plastid 47.52 33.68
Protein Annotations
EnsemblPlants:GSMUA_Achr8P17940_001EnsemblPlants:GSMUA_Achr8T17940_001EnsemblPlantsGene:GSMUA_Achr8G17940_001Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:Hydrolase_4
InterPro:IPR029058PANTHER:PTHR12277PANTHER:PTHR12277:SF118PFAM:PF12146SEG:segSUPFAM:SSF53474
UniParc:UPI000295009EUniProt:M0TRE7MapMan:35.2:::
Description
Putative Abhydrolase domain-containing protein FAM108B1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G17940_001]
Coordinates
chr8:+:19852914..19868649
Molecular Weight (calculated)
38179.4 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.417
Length
343 amino acids
Sequence
(BLAST)
001: MGGVTSSIAA KFAFFPPNPP TYAVIADEQS GRLAIPGIAA AGRDDVHVVR LPTRRGNEIV AVYLRHPRAT ATLLYSHGNA ADIGQMFDLF VELSVHLRVN
101: LIGYDYSGYG QSTGKPTEYN TYADIEAVYN CLKEQYGVAD EDLILYGQSV GSGPTLDLAS RLQKLRAVVL HSPILSGLRV LYPVKRTYWF DIYKNIDKIG
201: LVNCPILVIH GTSDEVVDCS HGKQLWELSK QKYEPLWLNG GGHCNLELYP EYIRHLKKFV SATQKDSAAR SNLKETKPPT RDDESGQSEI KAADDEHRAC
301: SCSEIARKSL DSQLRKPPKA DQPEKSRMST DLGERKRRKG LVW
Best Arabidopsis Sequence Match ( AT5G38220.1 )
(BLAST)
001: MGGVTSSIAA KFAFFPPSPP SYGFVSDVDR LYITEVPRRD DVDVLKLKTR RGNEIVAIYI KHPKANGTLL YSHGNAADLG QMFELFIELS NRLRLNLMGY
101: DYSGYGQSTG KASECNTYAD IDAAYTCLKE HYGVKDDQLI LYGQSVGSGP TIDLASRTPN LRGVVLHSPI LSGMRVLYPV KRTYWFDIYK NIDKIGAVTC
201: PVLVIHGTAD EVVDCSHGKQ LWELSKEKYE PLWVSGGGHC NLELYPEFIK HLKKYVISIS KGPRTGSNKT ATTDAAKKQS KPAENGRADT FQLGCCLPEV
301: SRNSVDSQLE KSKKTSKPEK SRMSIDRFRR KKGSVW
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FF34]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.