Factsheet for GSMUA_Achr9P07620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr8P19010_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	GSMUA_Achr11P...	AT4G39050.1	21798944
AT3G01690.1	GSMUA_Achr11P...	AT5G28900.1	21798944
AT3G01690.1	GSMUA_Achr8P19010_001	AT5G28900.1	21798944
AT3G01690.1	GSMUA_AchrUn_...	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P28640_001	Banana	plastid	84.51	84.74
GSMUA_Achr3P17130_001	Banana	plastid	84.24	84.47
GSMUA_Achr9P02010_001	Banana	plastid	78.26	78.47
CDY31930	Canola	cytosol	13.04	75.0
CDY37505	Canola	cytosol, extracellular	13.32	73.13
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	72.55	72.55
KRH07089	Soybean	cytosol	71.74	71.74
GSMUA_Achr9P22720_001	Banana	plastid	19.57	70.59
Solyc02g067920.2.1	Tomato	cytosol	70.11	69.73
KRH58237	Soybean	cytosol	68.75	68.94
CDX91066	Canola	plastid	61.41	68.9
PGSC0003DMT400017818	Potato	cytosol	69.29	68.73
PGSC0003DMT400039199	Potato	cytosol	69.29	68.73
Solyc03g111770.2.1	Tomato	cytosol	69.29	68.73
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	68.48	68.66
KRG93968	Soybean	cytosol	68.48	68.66
Zm00001d030601_P001	Maize	plastid	68.48	68.66
CDY03421	Canola	cytosol	66.58	68.25
Os12t0286600-01	Rice	cytosol, plastid	69.57	67.9
AT4G24760.1	Thale cress	cytosol, nucleus, plastid	67.12	67.67
AT3G01690.1	Thale cress	cytosol, plastid	66.3	67.59
Bra013831.1-P	Field mustard	cytosol	66.58	66.94
CDY34308	Canola	cytosol	66.58	66.94
VIT_17s0000g09740.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	70.11	66.67
KRH54278	Soybean	endoplasmic reticulum	68.21	65.88
KRH63667	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	67.66	65.53
CDY09851	Canola	plastid	65.49	65.14
Bra008761.1-P	Field mustard	endoplasmic reticulum	65.49	65.14
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	65.22	65.04
CDX69584	Canola	endoplasmic reticulum	65.22	64.86
CDY32850	Canola	cytosol	60.6	64.83
KRH03885	Soybean	cytosol, plastid	64.4	63.88
CDY37504	Canola	cytosol	13.04	63.16
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	61.96	63.16
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	61.96	63.16
KRH57170	Soybean	plastid	63.59	63.07
GSMUA_Achr10P...	Banana	plastid	60.33	62.71
GSMUA_Achr8P17940_001	Banana	plastid	57.07	61.22
CDX77081	Canola	plastid	34.51	60.19
GSMUA_Achr11P...	Banana	cytosol	47.83	59.66
GSMUA_Achr5P04500_001	Banana	cytosol	47.28	58.98
GSMUA_Achr3P28090_001	Banana	cytosol, nucleus, plastid	61.68	58.96
CDX85599	Canola	cytosol	41.58	58.62
KRG94364	Soybean	cytosol	22.01	58.27
GSMUA_Achr3P04580_001	Banana	cytosol	46.2	57.63
GSMUA_Achr9P13240_001	Banana	cytosol	45.92	57.29
CDX92650	Canola	cytosol	66.3	56.22
Bra023463.1-P	Field mustard	cytosol	41.58	55.64
CDY11031	Canola	cytosol, plastid	35.87	55.23
Bra040701.1-P	Field mustard	plastid	46.2	52.31
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	44.84	50.46
GSMUA_Achr1P06250_001	Banana	plastid	44.57	48.66
GSMUA_Achr7P17430_001	Banana	cytosol, plastid	42.93	46.33
KRG99188	Soybean	extracellular	13.04	45.71
Bra019211.1-P	Field mustard	nucleus	65.76	43.84
CDY53272	Canola	plastid	17.93	42.04
GSMUA_Achr1P06210_001	Banana	extracellular, plasma membrane	30.16	40.07
GSMUA_Achr1P06220_001	Banana	cytosol, endoplasmic reticulum, extracellular, mitochondrion, plastid	19.02	36.65

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07620_001	EnsemblPlants:GSMUA_Achr9T07620_001	EnsemblPlantsGene:GSMUA_Achr9G07620_001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4
InterPro:IPR029058	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000296FC1E	UniProt:M0TYC1	MapMan:35.2	:	:	:

Description

Abhydrolase domain-containing protein FAM108C1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07620_001]

Coordinates

chr9:+:4866711..4870395

Molecular Weight (calculated)

41660.9 Da

IEP (calculated)

9.611

GRAVY (calculated)

-0.455

Length

368 amino acids

Sequence
(BLAST)

001: MGGVTSSVAA KLAFFPPSPP LYEVVTEPES GVVRLSCFPH RENVEVLRLP TRRGTEIVAL YVRNPLAAST LLYSHGNAAD LGQMYELFVE LSIHLRVNLL
101: GYDYSGYGQS SGKPSEQNTY ADIEAAYKCL VEIYSAKEEE IVLYGQSVGS GPTVNLAARL PHLRAVILHS PILSGLRVMY PVKHTYWFDI YKNIDKISSV
201: NCPVLVIHGT SDEVVDFSHG TKLWELCNKK YEPLWLKGGK HCDLELFPEY IKHLKKFISA VQKSPSQRST WRRNADQFEL SRMSTSRLEP SRMSFGRRER
301: SKPSTAKSKS KDQTSPNVEK QEKMKISFDK TEKSRRSLDC FRLSGKHVAD QPDRGRRSVD RLDRIWAG

Best Arabidopsis Sequence Match ( AT4G24760.1 )
(BLAST)

001: MGGVTSSMAA KLAFFPPNPP SYKLVRDETT ELFLMSPFPH RENVDILRLP TRRGTEIVAM YIRYPMAVTT LLYSHGNAAD IGQMYELFIE LSIHLRVNLM
101: GYDYSGYGQS SGKPTEQNTY ADIEAAYKCL EENYGAKQEN IILYGQSVGS GPTVDLAARL PRLRASILHS PILSGLRVMY PVKRTYWFDI YKNIDKITLV
201: RCPVLVIHGT ADDVVDFSHG KQLWELCQEK YEPLWLKGGN HCDLELFPEY IGHLKKFVSA VEKSASKRNS SFSRRSMEGC EQPPRHSVDA PRKSKDGREK
301: PRKSIDRLRF QGYKLSHIEK PEKLKVPFEE MERSRRSVDI YRDKSQPMER ARKSVDWLDR SRATE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SB70]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.