Factsheet for Solyc02g067920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g110190.2.1
Solyc04g010070.2.1
Solyc05g054980.2.1
Solyc10g054080.1.1
Solyc11g044880.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01690.1	Solyc01g110190.2.1	AT4G39050.1	21798944
AT3G01690.1	Solyc10g054080.1.1	AT4G39050.1	21798944
AT3G01690.1	Solyc11g044880.1.1	AT4G39050.1	21798944
AT3G01690.1	Solyc04g010070.2.1	AT5G28900.1	21798944
AT3G01690.1	Solyc05g054980.2.1	AT5G28900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017818	Potato	cytosol	98.65	98.38
VIT_14s0219g00290.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	88.92	89.4
KRH07089	Soybean	cytosol	85.68	86.14
KRH58237	Soybean	cytosol	83.51	84.2
KRG93968	Soybean	cytosol	82.97	83.65
Solyc03g111770.2.1	Tomato	cytosol	80.0	79.78
CDX91066	Canola	plastid	69.19	78.05
AT3G01690.1	Thale cress	cytosol, plastid	75.68	77.56
CDY09851	Canola	plastid	77.03	77.03
Bra008761.1-P	Field mustard	endoplasmic reticulum	76.49	76.49
GSMUA_Achr9P02010_001	Banana	plastid	75.68	76.29
CDX69584	Canola	endoplasmic reticulum	76.22	76.22
AT5G14390.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	75.68	75.88
GSMUA_Achr3P17130_001	Banana	plastid	74.59	75.2
GSMUA_Achr8P28640_001	Banana	plastid	74.32	74.93
CDY32850	Canola	cytosol	69.46	74.71
CDY28862	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	71.35	73.13
CDY28668	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	71.35	73.13
Solyc02g065700.2.1	Tomato	cytosol	54.59	71.89
OQU79022	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	70.54	71.12
Solyc02g089320.2.1	Tomato	plastid	68.11	70.19
CDY37505	Canola	cytosol, extracellular	12.7	70.15
CDX85599	Canola	cytosol	49.46	70.11
GSMUA_Achr9P07620_001	Banana	plastid	69.73	70.11
Zm00001d030601_P001	Maize	plastid	68.92	69.48
Os12t0286600-01	Rice	cytosol, plastid	70.27	68.97
Bra023463.1-P	Field mustard	cytosol	49.46	66.55
CDX77081	Canola	plastid	37.03	64.93
Solyc02g086220.2.1	Tomato	cytosol, plastid	57.84	62.94
Solyc07g005130.2.1	Tomato	cytosol	48.38	60.68
Solyc03g034270.2.1	Tomato	plastid	55.41	60.29
GSMUA_Achr9P22710_001	Banana	endoplasmic reticulum, golgi	50.81	57.49
Solyc05g010680.1.1	Tomato	cytosol	54.05	52.22
Solyc08g076350.2.1	Tomato	plastid	44.05	41.79

Protein Annotations

EnsemblPlants:Solyc02g067920.2.1	EnsemblPlantsGene:Solyc02g067920.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:Hydrolase_4	InterPro:IPR029058
MEROPS:S09.A32	PANTHER:PTHR12277	PANTHER:PTHR12277:SF118	PFAM:PF12146	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002767748	UniProt:K4B7C4	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2:+:38007199..38013034

Molecular Weight (calculated)

42458.9 Da

IEP (calculated)

9.389

GRAVY (calculated)

-0.599

Length

370 amino acids

Sequence
(BLAST)

001: MGGVTSSMAA KFAFFPPNPP SYKLIKDDLT GLLLLSPFPH RENVEVLKLP TRKGTEIVAM YIRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLRVNLL
101: GYDYSGYGQS TGKPSEQNTY ADIEAAYKCL EENYGTKQED VILYGQSVGS GPTLDLAARL PRLRAVILHS PLLSGLRVMY PVKRTYWFDI YKNIDKIPSV
201: NCPVLIIHGT ADEVVDFSHG KQLWELCKEK YEPLWIKGGN HCDLELYPEY IRHLKKFVAT IERSQSQRIS CRKSTDQFEP PRKSTDVFEA SRKSTDRREK
301: PRHSTDRPEK LKNHSSNAIT DKLEKLRISF EQMERSRRSV DCTEKSRKSI DHQLERARKS VDRMDRIRTG

Best Arabidopsis Sequence Match ( AT5G14390.1 )
(BLAST)

001: MGGVTSSVAA KFAFFPPSPS SYKLVYDELT GLLLMNPFPH RENVEILKLP TRRGTEIVAM YVRHPMATST LLYSHGNAAD LGQMYELFIE LSIHLKVNLM
101: GYDYSGYGQS TGKPSEHHTY ADIEAAYKCL EETYGAKQED IILYGQSVGS GPTLDLAARL PQLRAAVLHS PILSGLRVMY PVKKTYWFDI FKNIDKIPLV
201: NCPVLVIHGT CDEVVDCSHG KQLWELSKEK YEPLWLEGGN HCDLEHYPEY IKHLKKFITT VERDLSSRAS TAQLEKQSSD LEMPRQSVDR REKPRQSVDK
301: REKEKPPKGP SKKSKLRITF EQHLDRTRRS VDFHEKARKS VDHHQHHQNH HQIERGRKSV DRLDRVRSE

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LY90]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.