Factsheet for Solyc11g044880.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g082970.1.1
Solyc02g092380.2.1
Solyc03g031460.1.1
Solyc03g095610.2.1
Solyc03g111100.1.1
Solyc03g112660.2.1
Solyc03g117290.1.1
Solyc03g120440.1.1
Solyc05g053730.2.1
Solyc06g008600.2.1
Solyc06g068330.1.1
Solyc06g084040.2.1
Solyc07g005690.2.1
Solyc07g052050.1.1
Solyc07g052190.1.1
Solyc07g054690.1.1
Solyc07g063190.2.1
Solyc09g008040.2.1
Solyc09g065280.2.1
Solyc09g065990.2.1
Solyc10g006970.2.1
Solyc10g079430.1.1
Solyc11g066420.1.1
Solyc12g009970.1.1
Solyc12g013810.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	Solyc07g052050.1.1	AT1G03140.1	21798944
AT4G39050.1	Solyc07g052190.1.1	AT1G03140.1	21798944
AT4G39050.1	Solyc09g065280.2.1	AT1G03140.1	21798944
AT4G39050.1	Solyc03g120440.1.1	AT1G15570.1	21798944
AT4G39050.1	Solyc03g031460.1.1	AT1G55890.1	21798944
AT4G39050.1	Solyc02g082970.1.1	AT2G17670.1	21798944
AT4G39050.1	Solyc06g008600.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc06g084040.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc09g065990.2.1	AT2G30580.1	21798944
AT4G39050.1	Solyc09g008040.2.1	AT2G36990.1	21798944
AT4G39050.1	Solyc07g063190.2.1	AT3G15360.1	21798944
AT4G39050.1	Solyc10g006970.2.1	AT3G15360.1	21798944
AT4G39050.1	Solyc12g013810.1.1	AT3G15360.1	21798944
AT4G39050.1	Solyc10g079430.1.1	AT3G60360.1	21798944
AT4G39050.1	Solyc03g112660.2.1	AT4G24680.1	21798944
AT4G39050.1	Solyc07g054690.1.1	AT4G28230.1	21798944
AT4G39050.1	Solyc03g095610.2.1	AT5G05190.1	21798944
AT4G39050.1	Solyc03g117290.1.1	AT5G11090.1	21798944
AT4G39050.1	Solyc06g068330.1.1	AT5G11090.1	21798944
AT4G39050.1	Solyc11g066420.1.1	AT5G22890.1	21798944
AT4G39050.1	Solyc05g053730.2.1	AT5G49210.1	21798944
AT4G39050.1	Solyc07g005690.2.1	AT5G57910.1	21798944
AT4G39050.1	Solyc12g009970.1.1	AT5G57910.1	21798944
AT4G39050.1	Solyc03g111100.1.1	AT5G63350.1	21798944
AT4G39050.1	Solyc02g092380.2.1	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g054080.1.1	Tomato	plastid	81.54	81.69
PGSC0003DMT400008772	Potato	cytosol	34.68	77.24
KRH60786	Soybean	plastid	74.51	74.3
KRH51475	Soybean	plastid	74.23	74.02
VIT_03s0038g00350.t01	Wine grape	plastid	76.29	73.93
KRH29374	Soybean	plastid	73.29	72.74
Solyc01g110190.2.1	Tomato	plastid	72.82	72.68
CDX72718	Canola	plastid	69.07	72.47
CDY12116	Canola	plastid	69.92	72.22
AT4G39050.1	Thale cress	plastid	71.13	71.94
CDY22394	Canola	plastid	69.82	71.84
CDX90305	Canola	plastid	69.54	71.83
Bra010714.1-P	Field mustard	plastid	70.01	71.08
KRH24392	Soybean	plastid	71.51	70.06
AT2G21380.2	Thale cress	plastid	68.6	69.19
CDX82022	Canola	plastid	68.14	67.88
Bra031184.1-P	Field mustard	plastid	68.14	67.82
KXG38192	Sorghum	plastid	64.67	65.78
Os10t0512800-01	Rice	plastid	64.95	65.44
TraesCS1B01G202600.1	Wheat	plastid	63.45	65.03
TraesCS1A01G177600.1	Wheat	plastid	63.36	64.94
TraesCS1D01G176100.1	Wheat	plastid	63.26	64.84
GSMUA_Achr11P...	Banana	plastid	22.31	63.47
Zm00001d013859_P002	Maize	plastid	63.26	62.91
Zm00001d032464_P008	Maize	plastid	63.17	62.81
HORVU1Hr1G047110.10	Barley	plastid	60.26	61.53
Bra033597.1-P	Field mustard	cytosol	70.2	61.44
Solyc03g053080.1.1	Tomato	cytosol, plastid	31.58	55.98
Solyc06g060140.2.1	Tomato	plastid	49.2	46.13
Solyc04g077540.2.1	Tomato	cytosol	18.09	23.31
Solyc01g057320.1.1	Tomato	cytosol, plastid	15.18	22.13
Solyc03g119220.2.1	Tomato	nucleus	18.46	20.48
Solyc07g042560.2.1	Tomato	plastid	18.18	20.21
Solyc10g083310.1.1	Tomato	cytosol	17.99	19.01
Solyc01g110380.2.1	Tomato	cytosol	16.4	18.98
Solyc09g010060.2.1	Tomato	cytosol	17.81	18.87
Solyc04g078610.2.1	Tomato	cytosol	18.18	18.82
Solyc04g081060.2.1	Tomato	nucleus	16.21	18.68
Solyc04g040110.2.1	Tomato	cytosol	22.21	18.68
Solyc04g076310.2.1	Tomato	cytosol, nucleus	17.24	18.4
Solyc02g084390.2.1	Tomato	cytosol	17.06	17.86
Solyc06g075580.2.1	Tomato	cytosol, plastid	17.43	17.82
Solyc02g062330.1.1	Tomato	extracellular	16.87	17.63
Solyc11g072820.1.1	Tomato	cytosol, plastid	17.34	17.59
Solyc10g086340.1.1	Tomato	cytosol	17.06	17.43
Solyc09g007030.2.1	Tomato	cytosol, plastid	16.4	16.57
Solyc07g065210.2.1	Tomato	plastid	17.53	15.7
Solyc11g071730.1.1	Tomato	cytosol	19.4	15.69
Solyc12g098630.1.1	Tomato	cytosol, plastid	18.74	15.24
Solyc09g097860.2.1	Tomato	cytosol	18.74	14.63
Solyc01g108670.2.1	Tomato	cytosol	21.37	7.77

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.30.40.10	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR001841	InterPro:IPR013083	InterPro:IPR036961	UniProt:K4D8F3	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF13920	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PFscan:PS50089	PANTHER:PTHR24115	PANTHER:PTHR24115:SF497	SMART:SM00129
SUPFAM:SSF52540	SUPFAM:SSF57850	EnsemblPlantsGene:Solyc11g044880.1	EnsemblPlants:Solyc11g044880.1.1	UniParc:UPI000276A5E0	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:32101489..32114772

Molecular Weight (calculated)

118567.0 Da

IEP (calculated)

5.809

GRAVY (calculated)

-0.565

Length

1067 amino acids

Sequence
(BLAST)

0001: MAASSSRGRS SSPSPFHYRK QSNSFSSSNS FMNGGRLMPR SVSSSTTSFI GSASGSRSMT PSRNRTDLAY SRPHGNRSPV NYPSAEELLV NEPVDMSRSG
0101: ESISVTVRFR PMSEREYQKG DESAWYADGD KIVRNEYNPA TAYAFDRVFG PDTSTQDVYE VAARPVVKAA MEGINGTVFA YGVTSSGKTH TMHGDHISPG
0201: IIPLAIKDVF SIIQDTPGCE FLLRVSYLEI YNEVINDLLD PTGQNLRVRE DNQGTYVEGI KEEVVLSPGH ALSFIAAGEE HRHVGSNNFN LFSSRSHTIF
0301: TLMIESSAHG DEYDGVVFSQ LNLIDLAGSE SSKTETTGLR RKEGSYINKS LLTLGTVIGK LSEGKSSHVP YRDSKLTRLL QTSLSGHGHV SLICTVTPAS
0401: SNMEETHNTL KFASRAKRVE IYASRNKIID EKSLIKKYQR EISCLKEELD QLRSGMLVGV NPVELMTLKQ QLEEGQVKMQ SRLEEEEEAK AALMSRIQRL
0501: TKLILVSSKN SIPGYLGDVA GHQRSHSPPE DDKMDSSMLI DGENQKDPSA DTSDPKHRRS SSKWNDGISQ VGNAITESAQ EGISMSDQMD LLVEQVKMLA
0601: GEIAFSTSTL KRLVEQSVND PESSQTQIQN LECEIQEKRK QMRMLEQHIV ESGKASVANA SFVEMQQTLM KLMTQCSEQS FELEIKSADN RILQEQLQNK
0701: CLENKELQEK ICRVEQQLAA FKAEQANPSS ERCVSDEYID ELRRKIQSQD VENDKLKLEH IQLAEENSGL HVQNQKLSEE ASYAKELASA AAVELKNLAA
0801: EVTKLSLQNA KLEKELLAAR EMSRSRSSNA QTGNVSSRKH GENIRPGRRG RVSGRVSEIS GGIHDDFDTW DLDPEDLKME LQARKQREAV LEAALADKEI
0901: VEDEYRKKVE EGKKREASLE NDLANMWVLV AQLKKENSAR QDLKLAADCQ LSGEGNMVNP EINVGDNKDL IPDVSQDGVH TNAAAEILKE EPLVAHLKAR
1001: MQEMKEKDIH LGNGDANSHI CKVCFESPTA AMLLPCRHFC LCKSCSLACI ECPICRTKIV DRIFAFT

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.