CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70170
CDX71815
CDX74505
CDX75826
CDX79708
CDX80954
CDX81722
CDX82437
CDX85730
CDX86248
CDX88648
CDX89193
CDX92648
CDX96836
CDX97807
CDX98183
CDX98822
CDY02778
CDY03428
CDY08267
CDY08725
CDY09178
CDY09179
CDY10748
CDY11025
CDY11841
CDY15450
CDY18468
CDY18994
CDY23989
CDY26081
CDY26819
CDY26965
CDY26966
CDY29659
CDY30354
CDY30747
CDY31715
CDY32499
CDY32739
CDY33924
CDY34301
CDY36499
CDY36574
CDY37439
CDY41170
CDY45734
CDY47131
CDY51107
CDY51271
CDY52144
CDY53304
CDY56435
CDY56997
CDY57462
CDY58906
CDY66142
CDY66415
CDY69109
CDY70877

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39050.1	CDY15450	AT1G03140.1	21798944
AT4G39050.1	CDY32499	AT1G03140.1	21798944
AT4G39050.1	CDY37439	AT1G03140.1	21798944
AT4G39050.1	CDX81722	AT1G15570.1	21798944
AT4G39050.1	CDX96836	AT1G15570.1	21798944
AT4G39050.1	CDY36574	AT1G15570.1	21798944
AT4G39050.1	CDY53304	AT1G15570.1	21798944
AT4G39050.1	CDY66415	AT1G15570.1	21798944
AT4G39050.1	CDY08267	AT1G55890.1	21798944
AT4G39050.1	CDY26081	AT1G55890.1	21798944
AT4G39050.1	CDY26819	AT2G17670.1	21798944
AT4G39050.1	CDY30354	AT2G17670.1	21798944
AT4G39050.1	CDX97807	AT2G30580.1	21798944
AT4G39050.1	CDY10748	AT2G30580.1	21798944
AT4G39050.1	CDY23989	AT2G30580.1	21798944
AT4G39050.1	CDY29659	AT2G30580.1	21798944
AT4G39050.1	CDY47131	AT2G30580.1	21798944
AT4G39050.1	CDX79708	AT2G36990.1	21798944
AT4G39050.1	CDY18468	AT2G36990.1	21798944
AT4G39050.1	CDY66142	AT2G36990.1	21798944
AT4G39050.1	CDX75826	AT3G15360.1	21798944
AT4G39050.1	CDX82437	AT3G15360.1	21798944
AT4G39050.1	CDX71815	AT3G60360.1	21798944
AT4G39050.1	CDY41170	AT3G60360.1	21798944
AT4G39050.1	CDY56997	AT3G60360.1	21798944
AT4G39050.1	CDY58906	AT3G60360.1	21798944
AT4G39050.1	CDX92648	AT4G24680.1	21798944
AT4G39050.1	CDY03428	AT4G24680.1	21798944
AT4G39050.1	CDY11025	AT4G24680.1	21798944
AT4G39050.1	CDY34301	AT4G24680.1	21798944
AT4G39050.1	CDX89193	AT4G28230.1	21798944
AT4G39050.1	CDY18994	AT4G28230.1	21798944
AT4G39050.1	CDX70170	AT5G05190.1	21798944
AT4G39050.1	CDX80954	AT5G05190.1	21798944
AT4G39050.1	CDX98822	AT5G05190.1	21798944
AT4G39050.1	CDY52144	AT5G05190.1	21798944
AT4G39050.1	CDX85730	AT5G11090.1	21798944
AT4G39050.1	CDY51107	AT5G11090.1	21798944
AT4G39050.1	CDX74505	AT5G22890.1	21798944
AT4G39050.1	CDX98183	AT5G22890.1	21798944
AT4G39050.1	CDY09178	AT5G22890.1	21798944
AT4G39050.1	CDY09179	AT5G22890.1	21798944
AT4G39050.1	CDY26965	AT5G22890.1	21798944
AT4G39050.1	CDY26966	AT5G22890.1	21798944
AT4G39050.1	CDY31715	AT5G22890.1	21798944
AT4G39050.1	CDY69109	AT5G22890.1	21798944
AT4G39050.1	CDX86248	AT5G49210.1	21798944
AT4G39050.1	CDY33924	AT5G49210.1	21798944
AT4G39050.1	CDY56435	AT5G49210.1	21798944
AT4G39050.1	CDY70877	AT5G49210.1	21798944
AT4G39050.1	CDX88648	AT5G57910.1	21798944
AT4G39050.1	CDY02778	AT5G57910.1	21798944
AT4G39050.1	CDY11841	AT5G57910.1	21798944
AT4G39050.1	CDY32739	AT5G57910.1	21798944
AT4G39050.1	CDY51271	AT5G57910.1	21798944
AT4G39050.1	CDY57462	AT5G57910.1	21798944
AT4G39050.1	CDY30747	AT5G63350.1	21798944
AT4G39050.1	CDY45734	AT5G63350.1	21798944
AT4G39050.1	CDY08725	AT5G67530.1	21798944
AT4G39050.1	CDY36499	AT5G67530.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90305	Canola	plastid	97.58	97.58
Bra010714.1-P	Field mustard	plastid	97.29	95.62
CDX72718	Canola	plastid	89.93	91.35
CDY22394	Canola	plastid	91.29	90.94
AT4G39050.1	Thale cress	plastid	91.97	90.05
CDX82022	Canola	plastid	80.54	77.68
KRH51475	Soybean	plastid	73.18	70.65
KRH60786	Soybean	plastid	72.99	70.47
VIT_03s0038g00350.t01	Wine grape	plastid	74.83	70.21
Solyc11g044880.1.1	Tomato	plastid	72.22	69.92
Solyc10g054080.1.1	Tomato	plastid	72.02	69.86
KRH29374	Soybean	plastid	72.02	69.21
KRH24392	Soybean	plastid	70.67	67.03
KXG38192	Sorghum	plastid	65.54	64.54
Os10t0512800-01	Rice	plastid	65.83	64.21
PGSC0003DMT400008772	Potato	cytosol	29.72	64.09
TraesCS1A01G177600.1	Wheat	plastid	64.38	63.88
TraesCS1B01G202600.1	Wheat	plastid	64.38	63.88
TraesCS1D01G176100.1	Wheat	plastid	64.28	63.78
Zm00001d032464_P008	Maize	plastid	64.38	61.98
Solyc01g110190.2.1	Tomato	plastid	63.7	61.55
Zm00001d013859_P002	Maize	plastid	63.6	61.23
HORVU1Hr1G047110.10	Barley	plastid	61.08	60.38
GSMUA_Achr11P...	Banana	plastid	21.3	58.67
CDY08179	Canola	plastid	42.3	48.66
CDY04671	Canola	plastid	42.01	48.33
CDY08463	Canola	cytosol, plastid	43.56	46.3
CDY01095	Canola	cytosol, plastid	43.47	46.19
CDY04998	Canola	plastid	42.79	45.33
CDY14073	Canola	plastid	42.59	45.04
CDY47900	Canola	cytosol	29.14	43.56
CDX75327	Canola	nucleus	9.78	37.41
CDY03483	Canola	cytosol	5.91	34.46
CDX85120	Canola	cytosol, plastid	12.0	30.02
CDX68941	Canola	cytosol	12.97	28.03
CDX77491	Canola	cytosol, plastid	9.78	27.67
CDY67829	Canola	cytosol	18.59	23.24
CDY67820	Canola	cytosol	18.59	23.24
CDY22404	Canola	nucleus	16.17	21.74
CDY44836	Canola	cytosol	18.49	21.01
CDY30956	Canola	cytosol, plastid	18.39	20.86
CDY42594	Canola	nucleus	16.46	20.68
CDX99601	Canola	nucleus	16.36	20.66
CDY41952	Canola	nucleus	16.17	20.54
CDY15900	Canola	nucleus	16.75	20.5
CDY27279	Canola	cytosol	16.17	20.47
CDY13822	Canola	nucleus	16.94	20.3
CDX82016	Canola	nucleus	16.94	20.3
CDY45884	Canola	cytosol, plastid	12.88	20.24
CDY34261	Canola	cytosol	16.07	19.6
CDX73746	Canola	cytosol	18.2	19.42
CDY19208	Canola	cytosol	18.1	19.2
CDY26167	Canola	cytosol, plastid	18.2	19.18
CDY21709	Canola	plastid	17.43	18.97
CDY35769	Canola	cytosol	18.97	18.96
CDY45912	Canola	cytosol	18.88	18.95
CDX86343	Canola	cytosol	18.78	18.85
CDX85308	Canola	cytosol	18.78	18.85
CDX77978	Canola	cytosol	18.01	18.84
CDY63235	Canola	cytosol	18.88	18.77
CDY19973	Canola	cytosol	18.78	18.74
CDX74009	Canola	cytosol	22.75	18.74
CDY29004	Canola	cytosol	18.3	18.69
CDY07951	Canola	cytosol	23.14	18.6
CDX81870	Canola	plastid	17.13	18.57
CDX77192	Canola	cytosol, plastid	18.68	18.45
CDX75064	Canola	cytosol	18.01	18.43
CDY30779	Canola	cytosol	17.62	18.4
CDX90660	Canola	cytosol	18.2	18.36
CDY31717	Canola	cytosol, plastid	18.59	18.34
CDX84151	Canola	cytosol	17.81	18.11
CDY03482	Canola	cytosol	16.46	17.8
CDY45220	Canola	cytosol	17.43	17.73
CDX82979	Canola	cytosol, plastid	18.2	17.7
CDY23691	Canola	cytosol, plastid	18.2	17.7
CDY30599	Canola	cytosol	17.52	17.64
CDY17754	Canola	cytosol	17.52	17.59
CDX93381	Canola	cytosol, plastid	17.43	16.35
CDY18447	Canola	cytosol, plastid	17.43	16.03
CDY36055	Canola	plastid	16.07	15.65
CDY55295	Canola	cytosol	19.07	15.52
CDX87944	Canola	cytosol	18.88	15.43
CDY43743	Canola	nucleus	14.13	15.42
CDY18100	Canola	cytosol, plastid	19.07	15.07
CDY56229	Canola	cytosol, plastid	18.97	14.9
CDX72728	Canola	cytosol	10.55	14.79
CDY47004	Canola	cytosol	17.72	14.5
CDY42843	Canola	cytosol	17.72	14.42
CDX82261	Canola	plastid	17.04	14.41
CDY58692	Canola	nucleus	17.81	14.36
CDY02183	Canola	nucleus	17.91	14.33
CDX92129	Canola	cytosol	20.14	10.88
CDX95855	Canola	cytosol	21.1	10.77
CDX75326	Canola	cytosol	3.78	10.71
CDY12957	Canola	cytosol	7.65	9.56
CDY70999	Canola	cytosol, mitochondrion	6.68	9.3
CDY71066	Canola	cytosol, mitochondrion	6.58	9.19
CDX99277	Canola	cytosol	22.36	8.54
CDX92299	Canola	cytosol	22.46	8.5
CDY02395	Canola	nucleus	2.9	4.46

Protein Annotations

MapMan:20.1.3.6	Gene3D:3.30.40.10	Gene3D:3.40.850.10	GO:A0A078FFV8	UniProt:A0A078FFV8	EnsemblPlants:CDY12116
ProteinID:CDY12116	ProteinID:CDY12116.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00061104001	InterPro:IPR001752
InterPro:IPR001841	InterPro:IPR013083	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF13920	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PFscan:PS50089	PANTHER:PTHR24115	PANTHER:PTHR24115:SF497	SMART:SM00129	SUPFAM:SSF52540
SUPFAM:SSF57850	UniParc:UPI0004EEEECD	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

BnaC03g60320DBnaC03g60320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFV8]

Coordinates

chrLK032017:+:663787..670565

Molecular Weight (calculated)

114025.0 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.508

Length

1033 amino acids

Sequence
(BLAST)

0001: MASSFSNRRP PSPASSTSSS HLSSRLIPRS SSTSASSFTN SGSRSMTTLS RTFSDSGLIG GSGSFGTASP VPYPSEELLG EPVEETVSSE RDSISVTVRF
0101: RPLSDREYQR GDEVAWYPDG DTMVRHEYNP LTAYAFDKVF GPQANTMDVY DVAARPVVKA AMEGVNGTVF AYGVTSSGKT HTMHGDQESP GIIPLAIRDV
0201: FSIIQDTPGR EFLLRVSYLE IYNEVINDLL DPTGQNLRVR EDSQGTYVEG IKEEVVLSPG HALSFIAAGE EHRHVGSNNF NLMSSRSHTL FTLMIESSAT
0301: GDEYDGVIFS QLNLIDLAGS ESSKTETTGL RRKEGSYINK SLLTLGTVIG KLSEGKATHI PYRDSKLTRL LQSSLSGHGH VSLICTITPA SSSNEETHNT
0401: LKFASRAKSI EIYASRNQII DEKSLIKKYQ REISILKLEL DQYRKGMLVG VNHEELMSLK QQLEEGQLKM QSRLEEEEEA KAALMSRIQK LTKLILVSTR
0501: NSIPGYLGDV PTLQRSLSAG KDDKLASPLL DNDNPGSPSS TLALVSDASL GFSHQRSSSK LNGETSPEAE STQGVMTPDE IDLLVEQVKM LAGEIAFSTS
0601: TLKRLVDQSV EDPENSQTQI QNLEHEIQEK KRQMRALEQL IIESGEASIA NASLVEMQQK VMSLMSQCHE KSFELEIKSA DNCILQEQLQ KKCTENKELH
0701: EKVNLLEQRL NAVSSENSSP SCSNNTVSGE YADELKRKIQ SLEIENEKLK LEHVQIVEEN SGLRVQNQKL AEEASYAKEL ASAAAVELKN LASEVTKLSL
0801: QNTKLGKELA AARVLAQTRN PGRISSGRSS GDEFDSWNLD PEDLKKELQA RKQREAALES ALAEKEFIED EYRKKAEEAK RREEALENDL ANMWVLVAKL
0901: KKDNGALSEI NGADSLRELE KNQSNVVLKE RQVASAPRQP EVVAVSKTEE TPKEEPLVAR LKARMQEMKE KEMKSQANGD ANSHICKVCF ESPTAAILLP
1001: CRHFCLCKSC SLACSECPIC RTKISDRLFA FPS

Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)

0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS

Arabidopsis Description

KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.