CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77491
CDX85120
CDY18100
CDY56229
CDY70999
CDY71066

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	CDX77491	AT3G23670.1	15258761
AT3G23670.1	CDX85120	AT3G23670.1	15258761
AT3G23670.1	CDY18100	AT3G23670.1	15258761
AT3G23670.1	CDY56229	AT3G23670.1	15258761
AT3G23670.1	CDY70999	AT3G23670.1	15258761
AT3G23670.1	CDY71066	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56229	Canola	cytosol, plastid	96.25	95.67
Bra028334.1-P	Field mustard	plastid	94.03	94.98
CDX85120	Canola	cytosol, plastid	29.0	91.77
CDX77491	Canola	cytosol, plastid	25.1	89.86
CDY70999	Canola	cytosol, mitochondrion	48.81	85.98
CDY71066	Canola	cytosol, mitochondrion	48.13	85.0
AT3G23670.1	Thale cress	cytosol	84.62	84.23
GSMUA_Achr7P17300_001	Banana	cytosol	10.25	71.28
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	63.66	62.09
KRG97368	Soybean	cytosol, plastid	57.0	59.84
GSMUA_Achr9P01650_001	Banana	cytosol	51.19	59.57
KRH31548	Soybean	cytosol, plastid	56.77	59.55
PGSC0003DMT400011905	Potato	cytosol, plastid	57.69	57.69
Solyc12g098630.1.1	Tomato	cytosol, plastid	57.77	57.55
KRH58812	Soybean	plastid	50.42	56.32
KRH42707	Soybean	plastid	50.19	55.36
Solyc09g097860.2.1	Tomato	cytosol	57.77	55.23
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	48.74	54.68
TraesCS6A01G389400.1	Wheat	cytosol	23.57	54.32
KXG25952	Sorghum	cytosol, plastid	44.07	50.7
HORVU6Hr1G090690.2	Barley	cytosol, plastid	24.18	49.61
TraesCS2A01G275700.2	Wheat	cytosol, plastid	43.0	49.47
TraesCS2B01G293400.1	Wheat	cytosol, plastid	42.92	49.38
Zm00001d025149_P001	Maize	cytosol, plastid	42.77	49.08
Os04t0350300-00	Rice	cytosol, plastid	25.94	48.36
HORVU2Hr1G067290.2	Barley	cytosol, plastid	42.46	48.34
TraesCS2D01G274700.1	Wheat	plastid	41.55	47.8
PGSC0003DMT400042877	Potato	nucleus	30.07	46.95
Os02t0489800-00	Rice	cytosol	21.12	46.15
CDX75327	Canola	nucleus	8.57	41.48
CDY36055	Canola	plastid	28.62	35.25
CDX82261	Canola	plastid	29.38	31.45
CDX68941	Canola	cytosol	10.86	29.71
CDY03483	Canola	cytosol	3.83	28.25
CDY67820	Canola	cytosol	14.38	22.76
CDY67829	Canola	cytosol	14.23	22.52
CDX87944	Canola	cytosol	21.12	21.84
CDY55295	Canola	cytosol	20.96	21.59
CDX85308	Canola	cytosol	16.99	21.57
CDX86343	Canola	cytosol	16.83	21.38
CDY47900	Canola	cytosol	11.25	21.27
CDY35769	Canola	cytosol	16.76	21.18
CDY63235	Canola	cytosol	16.83	21.17
CDY19973	Canola	cytosol	16.76	21.16
CDY30599	Canola	cytosol	16.6	21.15
CDY17754	Canola	cytosol	16.6	21.09
CDY45912	Canola	cytosol	16.45	20.89
CDY22404	Canola	nucleus	12.24	20.83
CDY08463	Canola	cytosol, plastid	15.3	20.58
CDY41952	Canola	nucleus	12.78	20.54
CDY31717	Canola	cytosol, plastid	16.45	20.53
CDY01095	Canola	cytosol, plastid	15.23	20.47
CDX77192	Canola	cytosol, plastid	16.37	20.46
CDX99601	Canola	nucleus	12.78	20.42
CDY42594	Canola	nucleus	12.7	20.19
CDX82016	Canola	nucleus	13.31	20.19
CDY13822	Canola	nucleus	13.31	20.19
CDY23691	Canola	cytosol, plastid	16.37	20.15
CDY15900	Canola	nucleus	13.01	20.14
CDX82979	Canola	cytosol, plastid	16.3	20.06
CDY27279	Canola	cytosol	12.47	19.98
CDX75064	Canola	cytosol	15.23	19.72
CDX84151	Canola	cytosol	15.3	19.68
CDY14073	Canola	plastid	14.69	19.65
CDY44836	Canola	cytosol	13.62	19.58
CDY04998	Canola	plastid	14.54	19.49
CDY30956	Canola	cytosol, plastid	13.47	19.32
CDY12116	Canola	plastid	15.07	19.07
CDY34261	Canola	cytosol	12.32	19.01
CDX90305	Canola	plastid	15.0	18.97
CDX72718	Canola	plastid	14.69	18.88
CDY22394	Canola	plastid	14.77	18.61
CDX73746	Canola	cytosol	13.77	18.59
CDX82022	Canola	plastid	15.15	18.49
CDY21709	Canola	plastid	13.39	18.44
CDY19208	Canola	cytosol	13.62	18.28
CDY26167	Canola	cytosol, plastid	13.7	18.27
CDY08179	Canola	plastid	12.55	18.26
CDX81870	Canola	plastid	13.31	18.26
CDX77978	Canola	cytosol	13.77	18.24
CDY04671	Canola	plastid	12.47	18.15
CDY45884	Canola	cytosol, plastid	9.03	17.96
CDX93381	Canola	cytosol, plastid	14.92	17.71
CDY30779	Canola	cytosol	13.31	17.59
CDY29004	Canola	cytosol	13.54	17.51
CDY18447	Canola	cytosol, plastid	14.92	17.36
CDY03482	Canola	cytosol	12.62	17.28
CDY45220	Canola	cytosol	13.39	17.24
CDY43743	Canola	nucleus	12.39	17.11
CDX90660	Canola	cytosol	13.31	16.99
CDY42843	Canola	cytosol	16.45	16.94
CDX74009	Canola	cytosol	16.22	16.91
CDY47004	Canola	cytosol	16.3	16.88
CDY58692	Canola	nucleus	16.45	16.78
CDY02183	Canola	nucleus	16.3	16.5
CDY07951	Canola	cytosol	16.22	16.5
CDX95855	Canola	cytosol	23.64	15.27
CDX92129	Canola	cytosol	21.27	14.55
CDX72728	Canola	cytosol	7.8	13.84
CDX92299	Canola	cytosol	26.47	12.68
CDX99277	Canola	cytosol	26.24	12.68
CDX75326	Canola	cytosol	3.06	10.99
CDY12957	Canola	cytosol	6.27	9.93
CDY02395	Canola	nucleus	2.98	5.8

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	GO:A0A078FUE1	UniProt:A0A078FUE1	EnsemblPlants:CDY18100	ProteinID:CDY18100
ProteinID:CDY18100.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00002594001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI0004EE5625	SEG:seg	:	:	:

Description

BnaA01g23610DBnaA01g23610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUE1]

Coordinates

chrLK032082:-:356654..362433

Molecular Weight (calculated)

145260.0 Da

IEP (calculated)

5.106

GRAVY (calculated)

-0.646

Length

1307 amino acids

Sequence
(BLAST)

0001: MKHFMMPRNA VVRDTGEPQS PNPSLTKSKS QRKSRSAKEN APPPDPNSLP PDYKSSPAKL KSPLPPRPPS ANPLKRKLIT EAPSDNGVAG VSDSGVKVIV
0101: RVKPPSKGEE EEMIVKKISS DALSINDHTF TFDSIADPDS TQDEIFQLVG APLVENCLAG FNSSVFAYGQ TGSGKTYTMW GPANGLLEEH LSGDQRGLTP
0201: RVFELLFARI SEEQVKHAER QLSYQCRCSF LEIYNEQITD LLDPSQKNLM IREDVKSGVY VEYLTEENVK NLKDLSRLLI KGLANRRTGA TSVNAESSRS
0301: HCVFTCVVES HCKSAADGLS SFKTSRINLV DLAGSERQKS TGAAGERLKE AGNINRSLSQ LGNLINILAE VSQTGKQRHI PYRDSRLTFL LQESLGGNAK
0401: LAMVCAVSPS QSCRSETFST LRFAQRAKAI QNKAIVNEVM QDDVNFLREV IRQLREELQR VKNNGNNPAN PNAAYATSWN ARRSMSLLRS FGLSHPKSLA
0501: NGDDDGDTEM EIDEEAVERL CAQIGLQSSP PAEENNPDTS RNSHLQSSDG QSTGKQFPED TDVNMEDASC QTENHEAGTI NNEPTVEEIS ITAAVQTMDH
0601: GSSVLPHLIT NSLGSPISDT DHDNSLGKAE NIPSCQDLVP GALVSSIVSV ADASDDTEHF SIIPVSPCLS IDPASASPVL ITPTESVSPK IRNSRKSLRT
0701: SSMSTASQKD MERANQVTTE IMEPSPAVAA STEKSGAFPV PTNQLAASLH RGMKILDSYR QSTAQRRSTF GFSYKALECK PSTVLSKADV GVQTYPEADI
0801: IAEENPKEVV CSKCKSIAEC DVQETSDISN LQLVTVDNSE KSSFQVPKAV EKVLAGSIRR EMALEEYCTK QASEISQLNR LVQQYKHERE CNAIIGQTRE
0901: DKIVRLESLM DGVLSKDDFL DEEFASLMHE HKLLKDMYEN HPEVLQTRIE LKRAQEELES FKNFYGEMGE REVLLEEIQD LKAHVHCYTD TSLTSSRKRG
1001: SLLKLTYTCD PNPAPPLNAI PESVEESPEK TLEQERLRWT EAERNWISLA EELKNELDTN RKLMEKQKRE LDTEKRCTEE LTEAMQMAMK GHARMIEQYA
1101: DLEEKHIQLL ARHRRIREGI DDVKKAAARA GVKGAESRFI NALAAEISAL KVQREKEAQY FRDENKSLQS QLRDTAEAVE AAGELLVRLK EAEEGLKIAQ
1201: KRARDAEYEA SEAHKQIDKL KKKKQETGIS TLNQQEQHIA ESHNHIESLQ ASFDGDDVAK YDEPVEPSAS ECDQQWKEEF KPFYEKDAEL ATLAEPSWFS
1301: GYDRCNI

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.