Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0489800-00 | |
| Os04t0350300-00 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0489800-00 | Rice | cytosol | 52.35 | 61.37 |
| TraesCS2D01G274700.1 | Wheat | plastid | 77.03 | 47.54 |
| TraesCS2B01G293400.1 | Wheat | cytosol, plastid | 76.89 | 47.45 |
| TraesCS2A01G275700.2 | Wheat | cytosol, plastid | 76.89 | 47.45 |
| HORVU2Hr1G067290.2 | Barley | cytosol, plastid | 77.03 | 47.04 |
| KXG25952 | Sorghum | cytosol, plastid | 75.04 | 46.3 |
| Zm00001d025149_P001 | Maize | cytosol, plastid | 73.47 | 45.22 |
| PGSC0003DMT400042877 | Potato | nucleus | 42.23 | 35.36 |
| GSMUA_Achr9P01650_001 | Banana | cytosol | 55.63 | 34.73 |
| GSMUA_Achr9P07340_001 | Banana | cytosol, plastid | 52.35 | 31.5 |
| CDY71066 | Canola | cytosol, mitochondrion | 32.67 | 30.95 |
| CDY70999 | Canola | cytosol, mitochondrion | 32.52 | 30.73 |
| VIT_05s0029g00400.t01 | Wine grape | cytosol, plastid | 55.21 | 28.88 |
| KRG97368 | Soybean | cytosol, plastid | 48.93 | 27.55 |
| KRH31548 | Soybean | cytosol, plastid | 48.64 | 27.37 |
| Solyc09g097860.2.1 | Tomato | cytosol | 51.78 | 26.55 |
| AT3G23670.1 | Thale cress | cytosol | 49.64 | 26.5 |
| KRH58812 | Soybean | plastid | 43.94 | 26.32 |
| Bra028334.1-P | Field mustard | plastid | 48.5 | 26.28 |
| AT4G14150.1 | Thale cress | cytosol, plastid | 48.22 | 26.16 |
| PGSC0003DMT400011905 | Potato | cytosol, plastid | 48.5 | 26.01 |
| KRH42707 | Soybean | plastid | 43.94 | 25.99 |
| CDY18100 | Canola | cytosol, plastid | 48.36 | 25.94 |
| Solyc12g098630.1.1 | Tomato | cytosol, plastid | 48.5 | 25.91 |
| Bra014969.1-P | Field mustard | cytosol, plastid | 49.22 | 25.9 |
| CDY56229 | Canola | cytosol, plastid | 48.07 | 25.63 |
| TraesCS6A01G389400.1 | Wheat | cytosol | 16.83 | 20.81 |
| HORVU6Hr1G090690.2 | Barley | cytosol, plastid | 18.26 | 20.09 |
| Os03t0587200-01 | Rice | cytosol | 30.39 | 18.87 |
| Os11t0552600-01 | Rice | cytosol, extracellular | 6.42 | 12.23 |
| Os09t0421200-01 | Rice | cytosol, nucleus | 5.85 | 11.52 |
| Os04t0434600-00 | Rice | plasma membrane | 12.13 | 8.51 |
| Os09t0114500-01 | Rice | cytosol | 12.27 | 8.31 |
| Os02t0644400-00 | Rice | cytosol | 6.99 | 7.78 |
| Os05t0117798-01 | Rice | cytosol | 11.27 | 7.48 |
| Os10t0512800-01 | Rice | plastid | 10.56 | 6.99 |
| Os01t0513900-01 | Rice | cytosol, plastid | 8.84 | 6.5 |
| Os09t0528000-01 | Rice | cytosol | 7.85 | 6.38 |
| Os08t0558400-02 | Rice | cytosol | 3.71 | 6.36 |
| Os12t0590500-00 | Rice | cytosol | 22.4 | 6.08 |
| Os04t0538800-01 | Rice | nucleus | 7.85 | 5.82 |
| Os02t0645100-01 | Rice | cytosol | 6.99 | 5.54 |
| Os08t0547500-01 | Rice | cytosol | 8.13 | 5.5 |
| Os07t0638000-01 | Rice | cytosol, nucleus | 3.14 | 5.49 |
| Os02t0775400-01 | Rice | mitochondrion | 4.28 | 5.48 |
| Os02t0742800-01 | Rice | plasma membrane | 3.28 | 4.17 |
| CDX85120 | Canola | cytosol, plastid | 1.14 | 1.94 |
| Os03t0279816-00 | Rice | cytosol, nucleus, plastid | 0.14 | 1.69 |
| GSMUA_Achr7P17300_001 | Banana | cytosol | 0.14 | 0.53 |
| Os06t0206700-01 | Rice | cytosol | 0.14 | 0.31 |
| Os02t0742900-01 | Rice | cytosol | 0.0 | 0.0 |
| CDX77491 | Canola | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.1980 | MapMan:20.1.3.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005871 | GO:GO:0005874 |
| GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009524 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:IPR001752 | InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_dom | EnsemblPlantsGene:Os04g0350300 | EnsemblPlants:Os04t0350300-00 |
| InterPro:P-loop_NTPase | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF413 | SUPFAM:SSF52540 | UniParc:UPI00039394CD |
| SEG:seg | : | : | : | : | : |
Description
phragmoplast-associated kinesin-related protein 1, PAKRP1 homolog, SKIP interacting protein 18, SKIPa-interacting protein 18, SKIPa-interacting protein 18Similar to SKIP interacting protein 18 (Fragment). (Os04t0350300-00)
Coordinates
chr4:+:16702664..16707387
Molecular Weight (calculated)
78936.6 Da
IEP (calculated)
4.745
GRAVY (calculated)
-0.693
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MICAVSPSQS CKSETLSTLR FAQRAKSIKN NAVVNEQKEE DVNMLREQIR QLKDELHRMK SGGSDGSNGS FSTGWNARRS LHLLKMSLSR PTTFQTIHED
101: SGDVEMEIDE NDVEKPYNQD NMVISPPGDK ECKELQASLK INGGTSLDVF DGENLMPTKR SCSDDRYKLN LAASIQRGLQ VIENHQNNGA WRRASVGFNA
201: RIVDVQPCKV DVAIQTEPEE SEARDNPLAL ISSHVLGTSA TVSNDPNACR DLQLVQYDAG ITRDEPKQQQ ILKAVEKVLA GAIRREMARD EQCVKQAAEI
301: QQLNRLVQQY KHERECNAVI AQTREGKIAR LESLMDGTLP TEEFINEEYL SLMNEHKILQ QKYENHPELL RAEIELKRLQ EELELCRNYI DEKEVLQEEI
401: QDLKSHLHFM LSSSASIRRL WPPVQLSHGV GPSPVTNDAD GDNNAVDTPD WAEAESKWVT LTEELRVELE ANKSLVGRLR SELESEKKCS EEVKEALQTA
501: MQGHARILEQ YAELEERHIG LLAMHRKIRE GVEDVKARAA KAGVKGAELR FINSLAAEMA VLRAENKGLQ DQLGDTAEAV QAAGELLVRL KEAEEAEALA
601: QRRALLAEQE TEKAYQEIDN LKKNYDQEIV ALNQRLSESS HHQETTLAIE ACDMETTKYD TAGSPGDQQW REEFNQQGGS FEVSKSTDLN SWFSGYDKCN
701: I
101: SGDVEMEIDE NDVEKPYNQD NMVISPPGDK ECKELQASLK INGGTSLDVF DGENLMPTKR SCSDDRYKLN LAASIQRGLQ VIENHQNNGA WRRASVGFNA
201: RIVDVQPCKV DVAIQTEPEE SEARDNPLAL ISSHVLGTSA TVSNDPNACR DLQLVQYDAG ITRDEPKQQQ ILKAVEKVLA GAIRREMARD EQCVKQAAEI
301: QQLNRLVQQY KHERECNAVI AQTREGKIAR LESLMDGTLP TEEFINEEYL SLMNEHKILQ QKYENHPELL RAEIELKRLQ EELELCRNYI DEKEVLQEEI
401: QDLKSHLHFM LSSSASIRRL WPPVQLSHGV GPSPVTNDAD GDNNAVDTPD WAEAESKWVT LTEELRVELE ANKSLVGRLR SELESEKKCS EEVKEALQTA
501: MQGHARILEQ YAELEERHIG LLAMHRKIRE GVEDVKARAA KAGVKGAELR FINSLAAEMA VLRAENKGLQ DQLGDTAEAV QAAGELLVRL KEAEEAEALA
601: QRRALLAEQE TEKAYQEIDN LKKNYDQEIV ALNQRLSESS HHQETTLAIE ACDMETTKYD TAGSPGDQQW REEFNQQGGS FEVSKSTDLN SWFSGYDKCN
701: I
0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI
Arabidopsis Description
KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.