Factsheet for PGSC0003DMT400011905

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400011905
PGSC0003DMT400042877

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	PGSC0003DMT400011905	AT3G23670.1	15258761
AT3G23670.1	PGSC0003DMT400042877	AT3G23670.1	15258761
AT4G14150.1	PGSC0003DMT400011905	AT3G23670.1	15258761
AT4G14150.1	PGSC0003DMT400042877	AT3G23670.1	15258761
AT4G14150.1	PGSC0003DMT400011905	AT4G14150.1	15258761
AT4G14150.1	PGSC0003DMT400042877	AT4G14150.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g098630.1.1	Tomato	cytosol, plastid	96.48	96.11
CDX85120	Canola	cytosol, plastid	23.34	73.85
CDX77491	Canola	cytosol, plastid	19.74	70.68
GSMUA_Achr7P17300_001	Banana	cytosol	10.02	69.68
PGSC0003DMT400042877	Potato	nucleus	43.15	67.38
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	65.03	63.43
KRG97368	Soybean	cytosol, plastid	57.31	60.16
KRH31548	Soybean	cytosol, plastid	57.0	59.79
GSMUA_Achr9P01650_001	Banana	cytosol	51.03	59.39
AT3G23670.1	Thale cress	cytosol	58.22	57.96
CDY18100	Canola	cytosol, plastid	57.69	57.69
AT4G14150.1	Thale cress	cytosol, plastid	56.39	57.04
CDY56229	Canola	cytosol, plastid	57.31	56.96
KRH58812	Soybean	plastid	50.73	56.67
Bra014969.1-P	Field mustard	cytosol, plastid	57.61	56.53
TraesCS6A01G389400.1	Wheat	cytosol	24.41	56.26
Bra028334.1-P	Field mustard	plastid	55.39	55.95
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	49.58	55.62
KRH42707	Soybean	plastid	50.42	55.61
HORVU6Hr1G090690.2	Barley	cytosol, plastid	25.02	51.33
KXG25952	Sorghum	cytosol, plastid	44.45	51.14
TraesCS2B01G293400.1	Wheat	cytosol, plastid	43.53	50.09
TraesCS2A01G275700.2	Wheat	cytosol, plastid	43.53	50.09
CDY71066	Canola	cytosol, mitochondrion	28.08	49.59
HORVU2Hr1G067290.2	Barley	cytosol, plastid	43.15	49.13
Zm00001d025149_P001	Maize	cytosol, plastid	42.77	49.08
CDY70999	Canola	cytosol, mitochondrion	27.85	49.06
TraesCS2D01G274700.1	Wheat	plastid	42.39	48.77
Os04t0350300-00	Rice	cytosol, plastid	26.01	48.5
Os02t0489800-00	Rice	cytosol	21.58	47.16
PGSC0003DMT400007659	Potato	cytosol	10.1	39.52
PGSC0003DMT400057119	Potato	plastid	31.83	34.96
PGSC0003DMT400012577	Potato	cytosol	14.23	22.46
PGSC0003DMT400078142	Potato	cytosol, plastid	16.3	20.4
PGSC0003DMT400040181	Potato	cytosol, plastid	16.3	20.23
PGSC0003DMT400005133	Potato	cytosol, plastid	15.38	19.53
PGSC0003DMT400023094	Potato	cytosol	14.54	18.87
PGSC0003DMT400049453	Potato	cytosol	14.92	18.62
PGSC0003DMT400024240	Potato	cytosol	16.99	18.32
PGSC0003DMT400009519	Potato	nucleus	12.7	17.97
PGSC0003DMT400035325	Potato	plastid	12.62	17.24
PGSC0003DMT400009131	Potato	cytosol	13.39	17.11
PGSC0003DMT400031343	Potato	nucleus	12.47	16.82
PGSC0003DMT400014403	Potato	nucleus	2.91	7.69
PGSC0003DMT400008772	Potato	cytosol	2.75	7.52
PGSC0003DMT400072611	Potato	cytosol	2.98	6.62
PGSC0003DMT400020657	Potato	plastid	0.23	2.63

Protein Annotations

EntrezGene:102603402	MapMan:20.1.3.10	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	UniProt:M1A0D3
InterPro:P-loop_NTPase	PFAM:PF00225	EnsemblPlantsGene:PGSC0003DMG400004673	PGSC:PGSC0003DMG400004673	EnsemblPlants:PGSC0003DMT400011905	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0002957AEE	RefSeq:XP_006349896.1	SEG:seg	:	:	:

Description

Kinesin [Source:PGSC_GENE;Acc:PGSC0003DMG400004673]

Coordinates

chr12:-:59469263..59477690

Molecular Weight (calculated)

146488.0 Da

IEP (calculated)

5.202

GRAVY (calculated)

-0.666

Length

1307 amino acids

Sequence
(BLAST)

0001: MKHYMQQRNT ILRENHDAAG ATMPPSSSPN PSLLKQKPSN SPSNPSSSST RKHKSSKENA PPPYHPLDLS SSPAVGLKNK SPLPPRPPPN SNSLKRKLNL
0101: ESVGTENLVA GSSDSGVKVI VRMRPPTKDE EEGEVVVQKI SNDSLSIAGH TFTFDSIADT QSTQVDIFQH VGAPVVENCL AGFNSSVFAY GQTGSGKTYT
0201: IWGPANALLE ENLTIDQQGL APRVFQRLFE RIEEEQIKHA DKQLMYQCRC SFLEIYNEQI TDLLDPSQKN LQIREDVRTG VYVENLTEEC VSSMKDVTKL
0301: LMKGVSNRRT GATSVNAESS RSHSVFTCVV ESRCQSMADG ISHLKRSRIN LVDLAGSERQ KLTGAAGERL KEAGNINKSL SQLGNLINIL AEVSQTGKNR
0401: HIPYRDSKLT FLLQESLGGN AKLAMICAVS PSQSCKSETL STLRFAQRAK AIKNKAVINE EMQDDVNVLR EVIRQLREEL LRMKANGYQA DQAGWSVRRS
0501: LNLLKFSLNH PMNLPVDNDG DTEMEVVEEA ELLGLLSEGS KENSMLGILR RTFSKGSSLL DSAVQHGGKE YGCNREQASE DTDVTMEEEV SETVIEHESS
0601: TVDGAGLQNF KRLGNDSSME PTEDEYALSS ASEMLNQGQR EVVEDSPSEK YPENSSKSLE GNTACTNLSI VQCDVSPILE PSISPRANSS RRSVGTSMLS
0701: DSKKDLGDKL DTPDLSFTKP SNSICLNSLS NQRNKSCFTS TEHLAASLQR GLEIISTHRQ STSLRRSSVR FSCKAADISA IIPVAKVDVG VQTVTKDYES
0801: FEGGSMFLCS KCKARNSLQE LKDADDDGSN LQLVPVNGLQ LVSATGSQSC ENFQIQVPKA VEKVLAGAIR REMALEDICS KQTFEITQLN RLIQQYKHER
0901: ECNAIISQTR EDKIIRLESY MDGILPKEEF MEDELMALIH EHKLLRAKYE NHPEVLSDRL ALRRVQEELE RYHNFFDLGE RDVLLEEIQD LRSQLQFYVD
1001: FSPKSSRKEN SLLQLTYPCE SSVPPTLSTI PESNENEESS EQSFERERIQ WTETESKWIS LVEELRLDLQ TSRTLSEKRK QELDLEKKCS EELKEAMQRA
1101: MQGHARMIEQ YAELEERHIQ LLARHRRVQV GIEDVKKAAT KAGVRGAESK FINALAAEIS TLRVEREKER HYYRDENTEL QNQLRDTAEA VQAAGELLAR
1201: LKEAEEDIAA AEKRAIHAEK EASEANKQIL KLKKKHEEEI NSLNHLPEEP RLPKATSEPV YDNTETGHDD QWKEEFASFY NTKEEEEDLP KFGEPSSWFS
1301: GYDRCNV

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.