CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77491
CDX85120
CDY18100
CDY56229
CDY70999
CDY71066

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	CDX77491	AT3G23670.1	15258761
AT3G23670.1	CDX85120	AT3G23670.1	15258761
AT3G23670.1	CDY18100	AT3G23670.1	15258761
AT3G23670.1	CDY56229	AT3G23670.1	15258761
AT3G23670.1	CDY70999	AT3G23670.1	15258761
AT3G23670.1	CDY71066	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85120	Canola	cytosol, plastid	96.71	85.47
GSMUA_Achr7P17300_001	Banana	cytosol	35.89	69.68
CDX75327	Canola	nucleus	25.75	34.81
TraesCS6A01G389400.1	Wheat	cytosol	52.33	33.69
HORVU6Hr1G090690.2	Barley	cytosol, plastid	52.88	30.3
CDY03483	Canola	cytosol	13.42	27.68
Bra014969.1-P	Field mustard	cytosol, plastid	98.63	27.03
CDY18100	Canola	cytosol, plastid	89.86	25.1
CDY56229	Canola	cytosol, plastid	90.14	25.02
AT3G23670.1	Thale cress	cytosol	87.12	24.22
GSMUA_Achr9P01650_001	Banana	cytosol	63.29	20.57
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	63.84	20.0
KRG97368	Soybean	cytosol, plastid	68.22	20.0
KRH31548	Soybean	cytosol, plastid	67.67	19.82
PGSC0003DMT400011905	Potato	cytosol, plastid	70.68	19.74
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	72.33	19.7
Solyc12g098630.1.1	Tomato	cytosol, plastid	70.41	19.59
KRH58812	Soybean	plastid	61.64	19.23
KXG25952	Sorghum	cytosol, plastid	59.73	19.19
KRH42707	Soybean	plastid	61.64	18.99
Solyc09g097860.2.1	Tomato	cytosol	69.86	18.65
CDX68941	Canola	cytosol	24.38	18.62
TraesCS2A01G275700.2	Wheat	cytosol, plastid	57.26	18.4
TraesCS2B01G293400.1	Wheat	cytosol, plastid	57.26	18.4
Zm00001d025149_P001	Maize	cytosol, plastid	56.16	18.0
HORVU2Hr1G067290.2	Barley	cytosol, plastid	55.07	17.51
TraesCS2D01G274700.1	Wheat	plastid	52.33	16.81
CDY36055	Canola	plastid	38.08	13.1
CDY47900	Canola	cytosol	24.38	12.88
CDY67820	Canola	cytosol	26.58	11.74
CDY67829	Canola	cytosol	26.58	11.74
CDX82261	Canola	plastid	38.9	11.63
CDX87944	Canola	cytosol	39.73	11.47
CDY55295	Canola	cytosol	39.45	11.35
CDY22404	Canola	nucleus	23.29	11.07
CDY41952	Canola	nucleus	23.84	10.7
CDX99601	Canola	nucleus	23.84	10.64
CDY08179	Canola	plastid	25.75	10.47
CDY42594	Canola	nucleus	23.56	10.46
CDX82016	Canola	nucleus	24.66	10.44
CDY13822	Canola	nucleus	24.66	10.44
CDY34261	Canola	cytosol	24.11	10.39
CDY04671	Canola	plastid	25.48	10.36
CDY15900	Canola	nucleus	23.84	10.31
CDX85308	Canola	cytosol	28.77	10.2
CDX86343	Canola	cytosol	28.77	10.2
CDX77192	Canola	cytosol, plastid	29.04	10.13
CDY31717	Canola	cytosol, plastid	29.04	10.12
CDY63235	Canola	cytosol	28.77	10.11
CDY19973	Canola	cytosol	28.49	10.05
CDY44836	Canola	cytosol	24.93	10.01
CDX75064	Canola	cytosol	27.4	9.91
CDY23691	Canola	cytosol, plastid	28.77	9.89
CDY30956	Canola	cytosol, plastid	24.66	9.88
CDY35769	Canola	cytosol	27.95	9.86
CDY04998	Canola	plastid	26.3	9.85
CDX84151	Canola	cytosol	27.4	9.84
CDX82979	Canola	cytosol, plastid	28.49	9.79
CDX90305	Canola	plastid	27.67	9.78
CDY12116	Canola	plastid	27.67	9.78
CDY14073	Canola	plastid	26.03	9.72
CDY27279	Canola	cytosol	21.64	9.68
CDY30599	Canola	cytosol	27.12	9.65
CDY17754	Canola	cytosol	27.12	9.62
CDY45912	Canola	cytosol	27.12	9.62
CDX73746	Canola	cytosol	25.48	9.61
CDY01095	Canola	cytosol, plastid	25.21	9.47
CDY08463	Canola	cytosol, plastid	25.21	9.47
CDX72718	Canola	plastid	26.3	9.44
CDX82022	Canola	plastid	27.67	9.43
CDX77978	Canola	cytosol	25.48	9.42
CDX93381	Canola	cytosol, plastid	28.22	9.36
CDY22394	Canola	plastid	26.58	9.35
CDY03482	Canola	cytosol	24.38	9.32
CDY45884	Canola	cytosol, plastid	16.71	9.28
CDY18447	Canola	cytosol, plastid	28.22	9.17
CDX81870	Canola	plastid	23.56	9.02
CDY26167	Canola	cytosol, plastid	24.11	8.98
CDY21709	Canola	plastid	23.29	8.96
CDY19208	Canola	cytosol	23.84	8.93
CDY29004	Canola	cytosol	24.38	8.8
CDY30779	Canola	cytosol	23.84	8.8
CDY43743	Canola	nucleus	22.47	8.66
CDX90660	Canola	cytosol	24.11	8.59
CDY45220	Canola	cytosol	23.84	8.57
CDX92129	Canola	cytosol	42.47	8.11
CDY42843	Canola	cytosol	27.12	7.8
CDY47004	Canola	cytosol	26.58	7.69
CDX74009	Canola	cytosol	26.3	7.66
CDX95855	Canola	cytosol	41.64	7.51
CDY58692	Canola	nucleus	26.3	7.49
CDY07951	Canola	cytosol	26.3	7.47
CDY02183	Canola	nucleus	26.03	7.36
CDX99277	Canola	cytosol	43.56	5.88
CDX72728	Canola	cytosol	11.78	5.83
CDX92299	Canola	cytosol	43.56	5.83
CDY71066	Canola	cytosol, mitochondrion	1.92	0.95
CDY70999	Canola	cytosol, mitochondrion	1.92	0.94
CDY12957	Canola	cytosol	0.82	0.36
CDX75326	Canola	cytosol	0.0	0.0
CDY02395	Canola	nucleus	0.0	0.0
Os02t0489800-00	Rice	cytosol	0.0	0.0
Os04t0350300-00	Rice	cytosol, plastid	0.0	0.0
PGSC0003DMT400042877	Potato	nucleus	0.0	0.0

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	GO:A0A078CJX8	EnsemblPlants:CDX77491	ProteinID:CDX77491	ProteinID:CDX77491.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00128361001	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF755	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EF1DC7
SEG:seg	:	:	:	:	:

Description

BnaA07g06290D

Coordinates

chrLK031811:-:1154767..1156816

Molecular Weight (calculated)

39920.5 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.541

Length

365 amino acids

Sequence
(BLAST)

001: MKHFMMPRNA VLRDVGEPQS PNPSSSKPKP QRKTRSAKEN APPPDLNSLP PDYKSSPAKM KCPLPPRPPR PPSANPLKRK LSAEAASDNG VSGGVSDSGV
101: KVIVRVKPPS KGEEEEMIVK KISSDSLTLN EHTFTFDSIA DPESTQDEIF QLVGAPLVEN CLAGFNSSVF AYGQTGSGKT YTMWGPANGL LEEHLSGDQR
201: GLTPRVFELL FARISEEQVK HADRQLSYQC RCSFLEIYNE QITDLLDPSQ KNLMIREDAK LGVYVDNLTK GYVKNLKDLS QLLIKGLVNR RTGATSVNAE
301: SSRSHCVFTC IVESHCKVGY GLSSFKTSRI NLVDLAGSER QKSTGAAGER LKEAGNINRS LSQLG

Best Arabidopsis Sequence Match ( AT3G23670.2 )
(BLAST)

001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIIHD LKAQLQCYTD SSLTSARRRG SLLKLTYACD PNQAPQLNTI PESVDEGPEK
701: TLEQERLRWT EAESNWISLA EELRTELDTN RLLMEKQKRE LDTEKRCAEE LTEAMQMAMQ GHARMIEQYA DLEEKHIQLL ARHRRIREGI DDVKKAAARA
801: GVKGAESRFI NALAAEISAL KVQREKEVRY FRDENKSLQS QLRDTAEAVQ AAGELLVRFK EAEEGLTFAQ KRAMDAEYEA SEAYKKVDKL KRKYETEIST
901: VNQQHNAEPQ NPIESLQASC NDDAMAKYDE PSASDGDNQW REEFQPFYKK DEELSKLAEP SWFSGYDRCN I

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.