CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82979	Canola	cytosol, plastid	98.59	98.59
AT3G45850.1	Thale cress	cytosol, plastid	93.5	93.24
VIT_06s0004g03810.t01	Wine grape	plastid	77.4	78.29
KRH10347	Soybean	plastid	75.61	76.4
KRH22970	Soybean	cytosol, plastid	75.33	76.12
KRG88692	Soybean	cytosol	74.11	75.02
KRH24979	Soybean	cytosol	72.98	74.38
KRH38089	Soybean	cytosol	26.55	73.44
GSMUA_Achr9P04070_001	Banana	cytosol	69.4	70.12
CDY31717	Canola	cytosol, plastid	69.11	70.11
CDX77192	Canola	cytosol, plastid	68.93	69.98
Os05t0117798-01	Rice	cytosol	68.46	68.84
GSMUA_Achr2P19060_001	Banana	cytosol	65.91	68.23
GSMUA_Achr7P15420_001	Banana	cytosol	67.51	67.96
EES18930	Sorghum	cytosol	67.14	67.78
TraesCS1D01G055200.1	Wheat	cytosol	67.51	67.64
TraesCS1B01G071500.1	Wheat	cytosol	67.42	67.55
TraesCS1A01G054400.2	Wheat	cytosol	67.7	67.26
Zm00001d035526_P010	Maize	cytosol	66.76	66.89
HORVU1Hr1G010810.1	Barley	cytosol	67.23	65.69
GSMUA_Achr6P33290_001	Banana	cytosol	63.65	65.44
TraesCS5D01G162500.1	Wheat	cytosol, plastid	56.97	56.97
HORVU5Hr1G049180.2	Barley	plastid	56.97	56.86
TraesCS5B01G156500.1	Wheat	plastid	56.78	56.67
TraesCS5A01G157200.1	Wheat	plastid	56.31	56.2
EES09071	Sorghum	plastid	56.5	54.69
Zm00001d030230_P003	Maize	plastid	53.77	52.15
OQU78566	Sorghum	cytosol	56.5	51.33
CDX75064	Canola	cytosol	43.79	46.09
CDX84151	Canola	cytosol	43.79	45.77
CDX93381	Canola	cytosol, plastid	44.44	42.87
CDY18447	Canola	cytosol, plastid	44.73	42.3
CDY43743	Canola	nucleus	37.57	42.13
CDX75327	Canola	nucleus	10.08	39.63
CDY03483	Canola	cytosol	5.27	31.64
CDX85120	Canola	cytosol, plastid	12.15	31.23
CDX68941	Canola	cytosol	13.47	29.92
CDX77491	Canola	cytosol, plastid	9.89	28.77
CDY47900	Canola	cytosol	14.6	22.43
CDY67829	Canola	cytosol	17.42	22.4
CDY67820	Canola	cytosol	17.33	22.28
CDY04671	Canola	plastid	17.04	20.16
CDY08179	Canola	plastid	16.95	20.04
CDY08463	Canola	cytosol, plastid	18.17	19.86
CDX86343	Canola	cytosol	19.21	19.83
CDY19973	Canola	cytosol	19.3	19.81
CDY41952	Canola	nucleus	15.16	19.8
CDY35769	Canola	cytosol	19.21	19.73
CDY45912	Canola	cytosol	19.11	19.73
CDY01095	Canola	cytosol, plastid	17.98	19.65
CDX85308	Canola	cytosol	19.02	19.63
CDY42594	Canola	nucleus	15.07	19.46
CDY63235	Canola	cytosol	19.02	19.44
CDX99601	Canola	nucleus	14.78	19.19
CDY04998	Canola	plastid	17.61	19.18
CDY45884	Canola	cytosol, plastid	11.86	19.18
CDY22404	Canola	nucleus	13.84	19.14
CDY27279	Canola	cytosol	14.69	19.12
CDY15900	Canola	nucleus	15.16	19.08
CDY30599	Canola	cytosol	18.36	19.01
CDY17754	Canola	cytosol	18.36	18.95
CDY14073	Canola	plastid	17.42	18.94
CDY34261	Canola	cytosol	14.78	18.54
CDX82016	Canola	nucleus	14.97	18.45
CDY21709	Canola	plastid	16.38	18.34
CDY13822	Canola	nucleus	14.88	18.33
CDX90305	Canola	plastid	17.8	18.3
CDX81870	Canola	plastid	16.38	18.26
CDY12116	Canola	plastid	17.7	18.2
CDX72718	Canola	plastid	17.33	18.09
CDY19208	Canola	cytosol	16.48	17.97
CDX73746	Canola	cytosol	16.29	17.87
CDY22394	Canola	plastid	17.42	17.84
CDY26167	Canola	cytosol, plastid	16.29	17.65
CDX77978	Canola	cytosol	16.29	17.53
CDY30956	Canola	cytosol, plastid	14.69	17.12
CDY47004	Canola	cytosol	20.34	17.12
CDY44836	Canola	cytosol	14.6	17.05
CDY42843	Canola	cytosol	20.34	17.02
CDY03482	Canola	cytosol	15.25	16.96
CDX87944	Canola	cytosol	20.06	16.85
CDX82022	Canola	plastid	16.95	16.81
CDY58692	Canola	nucleus	20.24	16.78
CDY55295	Canola	cytosol	19.87	16.63
CDY02183	Canola	nucleus	20.15	16.58
CDY30779	Canola	cytosol	15.35	16.48
CDY29004	Canola	cytosol	15.63	16.42
CDY18100	Canola	cytosol, plastid	20.15	16.37
CDX90660	Canola	cytosol	15.72	16.31
CDY56229	Canola	cytosol, plastid	20.06	16.2
CDY45220	Canola	cytosol	15.35	16.06
CDX74009	Canola	cytosol	18.55	15.71
CDY36055	Canola	plastid	15.54	15.55
CDY07951	Canola	cytosol	18.74	15.49
CDX82261	Canola	plastid	16.01	13.92
CDX72728	Canola	cytosol	8.47	12.21
CDX92129	Canola	cytosol	21.19	11.77
CDX95855	Canola	cytosol	22.22	11.66
CDX75326	Canola	cytosol	3.67	10.71
CDY71066	Canola	cytosol, mitochondrion	6.87	9.86
CDY70999	Canola	cytosol, mitochondrion	6.87	9.84
CDY12957	Canola	cytosol	7.53	9.69
CDX99277	Canola	cytosol	22.69	8.91
CDX92299	Canola	cytosol	22.79	8.87
CDY02395	Canola	nucleus	3.3	5.21

Protein Annotations

MapMan:20.1.3.4	Gene3D:3.40.850.10	GO:A0A078GE97	UniProt:A0A078GE97	EnsemblPlants:CDY23691	ProteinID:CDY23691
ProteinID:CDY23691.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00023977001	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF515	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI0004EE3989	SEG:seg	:	:	:

Description

BnaC01g24300DBnaC01g24300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE97]

Coordinates

chrLK032147:+:104180..109888

Molecular Weight (calculated)

119325.0 Da

IEP (calculated)

5.893

GRAVY (calculated)

-0.594

Length

1062 amino acids

Sequence
(BLAST)

0001: MVDNFSRTDS MQQRRGGGGV SLSPAQTPRS SDKLARESRS SDSNSTNRND KEKGVNVQVI LRCRPLSEDE ARLHTPVVIS CNEHRREVAA TQSIAGKHID
0101: RHFAFDKVFG PASQQKDLYD QAICPIVFEV LEGYNCTIFA YGQTGTGKTY TMEGGARKKN GEFPSDAGVI PRAVKQIFDI LEAQGAEYSM KVTFLELYNE
0201: EISDLLAPEE TTKFVDDKSK KSIALMEDGK GSVFVRGLEE EIVSTANEIY KILEKGSAKR RTAETLLNKQ SSRSHSIFSI TIHIKENTPE GEEMIKCGKL
0301: NLVDLAGSEN ISRSGAREGR AREAGEINKS LLTLGRVINA LVEHSGHIPY RDSKLTRLLR DSLGGKTKTC VIATISPSIH CLEETLSTLD YAHRAKNIKN
0401: KPEINQKMMK SAVMKDLYSE IDRLKQEVYA AREKNGIYIP KDRYLQEEAE KKAMAEKIER LELQSESKDK QVIDLQELYN AQKLLTAELS EKLDKTEKKL
0501: EETEHSLFDL EEKYRQANAT IKEKEFVISN LLKSEKSLVE RAFQLRKELE SAASDVSNLF SKIERKDKIE DGNICLIQKF QSQLTEQLEL LHKTVASSVT
0601: QQEVQLKHME EDMESFVSTK SEATEELRER LSKLKSVYGS GIEALDNLAV KLDENSRTTF GGLNLEVSKH SHELENVFKG FASEADILLQ DLQSSLNKQE
0701: EKLIAFAQQQ RKAHSQAVDS ARSVSKVTVE FFKTLDTHAT KLTGIVEEAQ AVNHRKLSEF ENKFEECAKN EERQLLEKVA ELLANSNSRK KNLVQMAVQD
0801: LRESASTRTT TLQHEMSTMQ DSTSSIKAEW NLHMVKTESN YHQDTSAVES GKKSMQEVLL NCLEKAEMSA HQWRKAQESL VSLERNNVAS VDSIVRVGMD
0901: ANENLRSQFS SAVSSSLDVF DAANASLLTS IDHSLKLDND ACAKINSMII PCYEDLIELK SDHNHKIVEI TDNAGKCLLD EYIVDEPSCS TPRKRAIEIP
1001: SFESIEELRT SASEELLRAF QDEKLFKQAN GDAKQQQHHL IRVSSLYEAA VSDSRSPLSA VN

Best Arabidopsis Sequence Match ( AT3G45850.1 )
(BLAST)

0001: MVDNFSRMDS IQQRRGGIVS LSPAQTPRSS DKSARESRSS ESNSTNRNDK EKGVNVQVIL RCRPLSEDEA RIHTPVVISC NENRREVAAT QSIAGKHIDR
0101: HFAFDKVFGP ASQQKDLYDQ AICPIVFEVL EGYNCTIFAY GQTGTGKTYT MEGGARKKNG EFPSDAGVIP RAVKQIFDIL EAQGAEYSMK VTFLELYNEE
0201: ISDLLAPEET IKFVDEKSKK SIALMEDGKG SVFVRGLEEE IVSTANEIYK ILEKGSAKRR TAETLLNKQS SRSHSIFSIT IHIKENTPEG EEMIKCGKLN
0301: LVDLAGSENI SRSGAREGRA REAGEINKSL LTLGRVINAL VEHSGHIPYR DSKLTRLLRE SLGGKTKTCV IATISPSIHC LEETLSTLDY AHRAKNIKNK
0401: PEINQKMMKS AVMKDLYSEI DRLKQEVYAA REKNGIYIPK DRYIQEEAEK KAMAEKIERL ELQSESKDKR VVDLQELYNS QQILTAELSE KLEKTEKKLE
0501: ETEHSLFDLE EKYRQANATI KEKEFVISNL LKSEKSLVER AFQLRTELES ASSDVSNLFS KIERKDKIED GNRFLIQKFQ SQLTQQLELL HKTVASSVTQ
0601: QEVQLKHMEE DMESFVSTKS EATEELRDRL SKLKRVYGSG IEALDNIAVK LDGNSQSTFS SLNSEVSKHS HELENVFKGF ASEADMLLQD LQSSLNKQEE
0701: KLITFAQQQR KAHSRAVDTA RSVSKVTVEF FKTLDTHATK LTGIVEEAQT VNHKKLSEFE NKFEECAANE ERQLLEKVAE LLANSNARKK NLVQMAVHDL
0801: RESASTRTTT LQHEMSTMQD STSSIKAEWS IHMEKTESSH HEDTSAVESG KKAMQEVLLN CLEKTEMSAH QWRKAQESLV SLERNNVASV DSIVRGGMDA
0901: NENLRSQFST AVSSSLDVFD AANSSLLTSI DHSLQLDNDA CTKVNSMIIP CCEDLIELKS DHNHKIIEIT ENAGKCLLDE YVVDEPSCST PKKRPIDIPS
1001: IESIEELRTP ASEELLRAFR DEKLSKQANG DAKQQQQQQQ QHLIRASSLY EAAVSDSRYP LSAVN

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT3G45850]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.