Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G156500.1 | Wheat | plastid | 97.46 | 97.27 |
| TraesCS5A01G157200.1 | Wheat | plastid | 96.89 | 96.71 |
| HORVU5Hr1G049180.2 | Barley | plastid | 95.67 | 95.49 |
| EES09071 | Sorghum | plastid | 77.68 | 75.21 |
| Zm00001d030230_P003 | Maize | plastid | 73.92 | 71.69 |
| OQU78566 | Sorghum | cytosol | 77.97 | 70.83 |
| KRH38089 | Soybean | cytosol | 22.69 | 62.76 |
| VIT_06s0004g03810.t01 | Wine grape | plastid | 59.7 | 60.38 |
| KRH10347 | Soybean | plastid | 59.13 | 59.75 |
| KRH22970 | Soybean | cytosol, plastid | 58.85 | 59.47 |
| PGSC0003DMT400040181 | Potato | cytosol, plastid | 58.76 | 59.26 |
| TraesCS1D01G055200.1 | Wheat | cytosol | 59.04 | 59.15 |
| KRG88692 | Soybean | cytosol | 58.38 | 59.1 |
| Solyc11g072820.1.1 | Tomato | cytosol, plastid | 58.47 | 59.03 |
| KRH24979 | Soybean | cytosol | 57.82 | 58.93 |
| Solyc06g075580.2.1 | Tomato | cytosol, plastid | 57.44 | 58.43 |
| PGSC0003DMT400078142 | Potato | cytosol, plastid | 57.25 | 58.24 |
| AT3G45850.1 | Thale cress | cytosol, plastid | 57.63 | 57.46 |
| Bra033832.1-P | Field mustard | cytosol | 56.78 | 57.32 |
| CDY23691 | Canola | cytosol, plastid | 56.97 | 56.97 |
| CDX82979 | Canola | cytosol, plastid | 56.87 | 56.87 |
| AT2G28620.2 | Thale cress | cytosol, plastid | 54.61 | 55.66 |
| CDY31717 | Canola | cytosol, plastid | 54.43 | 55.21 |
| CDX77192 | Canola | cytosol, plastid | 54.33 | 55.16 |
| Bra035686.1-P | Field mustard | plastid | 54.33 | 55.11 |
| PGSC0003DMT400005133 | Potato | cytosol, plastid | 45.86 | 47.33 |
| Solyc09g007030.2.1 | Tomato | cytosol, plastid | 46.61 | 46.88 |
| TraesCS7D01G278800.1 | Wheat | cytosol | 42.75 | 45.13 |
| TraesCS4D01G204200.1 | Wheat | cytosol, plastid | 31.17 | 35.82 |
| TraesCS4D01G158800.1 | Wheat | cytosol | 15.54 | 25.82 |
| TraesCS5D01G167500.1 | Wheat | cytosol | 19.4 | 19.96 |
| TraesCS6D01G314500.1 | Wheat | cytosol, mitochondrion, plastid | 18.17 | 19.3 |
| TraesCS1D01G176100.1 | Wheat | plastid | 18.17 | 18.54 |
| TraesCS7D01G167700.1 | Wheat | cytosol, plastid | 16.95 | 18.46 |
| TraesCS6D01G221400.1 | Wheat | cytosol | 14.97 | 18.25 |
| TraesCS2D01G274700.1 | Wheat | plastid | 18.83 | 17.61 |
| TraesCS6D01G091600.1 | Wheat | plastid | 15.54 | 17.33 |
| TraesCS2D01G304000.1 | Wheat | plastid | 18.64 | 17.2 |
| TraesCS2D01G385000.1 | Wheat | nucleus | 15.16 | 17.18 |
| TraesCS5D01G323300.1 | Wheat | cytosol | 14.12 | 17.01 |
| TraesCS5D01G405400.1 | Wheat | plastid | 15.07 | 16.77 |
| TraesCS5D01G399800.1 | Wheat | cytosol | 19.4 | 16.08 |
| TraesCS2D01G213200.1 | Wheat | cytosol | 18.83 | 15.79 |
| TraesCS7D01G271200.2 | Wheat | nucleus | 15.25 | 15.65 |
| TraesCS5D01G231200.2 | Wheat | cytosol | 17.23 | 14.96 |
| TraesCS5D01G044700.1 | Wheat | mitochondrion | 15.25 | 14.44 |
| TraesCS2D01G154600.1 | Wheat | cytosol, plastid | 19.96 | 9.82 |
| TraesCS5D01G078500.1 | Wheat | cytosol | 21.75 | 7.66 |
Protein Annotations
| MapMan:20.1.3.4 | Gene3D:3.40.850.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 |
| InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_CS | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 |
| PRINTS:PR00380 | ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF517 | SMART:SM00129 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS5D01G162500 | EnsemblPlants:TraesCS5D01G162500.1 | TIGR:cd01364 | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:+:253542772..253549416
Molecular Weight (calculated)
117564.0 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.521
Length
1062 amino acids
Sequence
(BLAST)
(BLAST)
0001: METSTPRRAP GADAAAASSY VSMSPSPSHT PRSSTKAKRT LNNGAAIVAS SPSPSPSLAK GGGGGVNIQV LLRCRPLSKE ELSINTPVVI TCNEQRREVS
0101: AAQNIANKQI DRTFVFDKVF GPKSKQQDVF NHAVVPLVGE VLDGYNCTIF AYGQTGTGKT YTMEGGGGKT QDGELPSDAG VIPRAVKRIF DILEAQSAEY
0201: SMKVSFLELY NEELTDLLAP DESKFSDDKS KKPMALMEDG KGGVFVRGLE EEVVSSASEI YKILERGSGK RKTAETLLNK QSSRSHSIFS ITIHIKECTP
0301: EGEEMIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIN TLVEHSGHIP YRDSKLTRLL RDSLGGKTKT CIIATIAPSV HCLDETLSTL
0401: DYAHRAKNIK NKPEVNQKMM KSALIKDLYF EMDRLKQELY AAREKNGIYI PGEQYLADEA EKKAMSEKLD RLELGLESKD KQLDELQGLY DSQKVLSADL
0501: SDKLQTLQKK MQETECALVV LEEKYMQANN TIKEKEYLIE NLLKTEKVLV HEAHTLRSEL ENTTDDLSGL FSKLERKGKI EDANKNIVGH FHSQLTQDMD
0601: ILHRNISTSV SQQESQLKVL EEEMQSFITT KGKVAGGLQN QVREMKESFS SRITELHGFA SELNLKSQLS SEKLNAQVSA HTSDLEDCLK GLLADADQLL
0701: IGLQNGLSQQ EESLTTLVEQ QHEGLTRNVE RTKSISATTM NFFRTIDAHA LELKRILEES QASHQKQLLQ LQTKFEICAA DEEKYLMEKV AGLLAESNAR
0801: KKNMVRDDIS SLAKTASERS NSLQTETTKF HDFTSSMSEQ WEAYVEITEE AFHRNISSVE QKKCCLVENV QQCKTRTKLC SEQWSNAQNS VLALGRSNAE
0901: TIGSVISDGN EANSQLHMRF SSAVSTALED NDISSEALVC SIDDSLRLDR AICETVRPII NASQTQLGDL QRSHHEKTLG ISGNANRSLG DDYKVDEPTC
1001: STPTRRQINI PSSQSIEGLV TPLEDLVKSF RDSRTPSKLV TGNAKRLDLA IEMERVPLTT IN
0101: AAQNIANKQI DRTFVFDKVF GPKSKQQDVF NHAVVPLVGE VLDGYNCTIF AYGQTGTGKT YTMEGGGGKT QDGELPSDAG VIPRAVKRIF DILEAQSAEY
0201: SMKVSFLELY NEELTDLLAP DESKFSDDKS KKPMALMEDG KGGVFVRGLE EEVVSSASEI YKILERGSGK RKTAETLLNK QSSRSHSIFS ITIHIKECTP
0301: EGEEMIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIN TLVEHSGHIP YRDSKLTRLL RDSLGGKTKT CIIATIAPSV HCLDETLSTL
0401: DYAHRAKNIK NKPEVNQKMM KSALIKDLYF EMDRLKQELY AAREKNGIYI PGEQYLADEA EKKAMSEKLD RLELGLESKD KQLDELQGLY DSQKVLSADL
0501: SDKLQTLQKK MQETECALVV LEEKYMQANN TIKEKEYLIE NLLKTEKVLV HEAHTLRSEL ENTTDDLSGL FSKLERKGKI EDANKNIVGH FHSQLTQDMD
0601: ILHRNISTSV SQQESQLKVL EEEMQSFITT KGKVAGGLQN QVREMKESFS SRITELHGFA SELNLKSQLS SEKLNAQVSA HTSDLEDCLK GLLADADQLL
0701: IGLQNGLSQQ EESLTTLVEQ QHEGLTRNVE RTKSISATTM NFFRTIDAHA LELKRILEES QASHQKQLLQ LQTKFEICAA DEEKYLMEKV AGLLAESNAR
0801: KKNMVRDDIS SLAKTASERS NSLQTETTKF HDFTSSMSEQ WEAYVEITEE AFHRNISSVE QKKCCLVENV QQCKTRTKLC SEQWSNAQNS VLALGRSNAE
0901: TIGSVISDGN EANSQLHMRF SSAVSTALED NDISSEALVC SIDDSLRLDR AICETVRPII NASQTQLGDL QRSHHEKTLG ISGNANRSLG DDYKVDEPTC
1001: STPTRRQINI PSSQSIEGLV TPLEDLVKSF RDSRTPSKLV TGNAKRLDLA IEMERVPLTT IN
0001: MDSNNSKKGS SVKSPCQTPR STEKSNRDFR VDSNSNSNPV SKNEKEKGVN IQVIVRCRPF NSEETRLQTP AVLTCNDRKK EVAVAQNIAG KQIDKTFLFD
0101: KVFGPTSQQK DLYHQAVSPI VFEVLDGYNC TIFAYGQTGT GKTYTMEGGA RKKNGEIPSD AGVIPRAVKQ IFDILEAQSA AEYSLKVSFL ELYNEELTDL
0201: LAPEETKFAD DKSKKPLALM EDGKGGVFVR GLEEEIVSTA DEIYKVLEKG SAKRRTAETL LNKQSSRSHS IFSVTIHIKE CTPEGEEIVK SGKLNLVDLA
0301: GSENISRSGA REGRAREAGE INKSLLTLGR VINALVEHSG HIPYRESKLT RLLRDSLGGK TKTCVIATVS PSVHCLEETL STLDYAHRAK HIKNKPEVNQ
0401: KMMKSAIMKD LYSEIERLKQ EVYAAREKNG IYIPKERYTQ EEAEKKAMAD KIEQMEVEGE AKDKQIIDLQ ELYNSEQLVT AGLREKLDKT EKKLYETEQA
0501: LLDLEEKHRQ AVATIKEKEY LISNLLKSEK TLVDRAVELQ AELANAASDV SNLFAKIGRK DKIEDSNRSL IQDFQSQLLR QLELLNNSVA GSVSQQEKQL
0601: QDMENVMVSF VSAKTKATET LRGSLAQLKE KYNTGIKSLD DIAGNLDKDS QSTLNDLNSE VTKHSCALED MFKGFTSEAY TLLEGLQGSL HNQEEKLSAF
0701: TQQQRDLHSR SMDSAKSVST VMLDFFKTLD THANKLTKLA EDAQNVNEQK LSAFTKKFEE SIANEEKQML EKVAELLASS NARKKELVQI AVQDIRQGSS
0801: SQTGALQQEM SAMQDSASSI KVQWNSHIVQ AESHHLDNIS AVEVAKEDMQ KMHLKCLENS KTGTQQWKTA QESLVDLEKR NVATADSIIR GAIENNEKLR
0901: TQFSSAVSTT LSDVDSSNRE IISSIDNSLQ LDKDASTDVN STIVPCSENL KELRTHHDDN VVEIKQNTGK CLGHEYKVDE ATSSTPRKRE YNIPTVGSIE
1001: ELKTPSFEEL LKAFHDCKSP KQMQNGEAKH VSNGRPPLTA IN
0101: KVFGPTSQQK DLYHQAVSPI VFEVLDGYNC TIFAYGQTGT GKTYTMEGGA RKKNGEIPSD AGVIPRAVKQ IFDILEAQSA AEYSLKVSFL ELYNEELTDL
0201: LAPEETKFAD DKSKKPLALM EDGKGGVFVR GLEEEIVSTA DEIYKVLEKG SAKRRTAETL LNKQSSRSHS IFSVTIHIKE CTPEGEEIVK SGKLNLVDLA
0301: GSENISRSGA REGRAREAGE INKSLLTLGR VINALVEHSG HIPYRESKLT RLLRDSLGGK TKTCVIATVS PSVHCLEETL STLDYAHRAK HIKNKPEVNQ
0401: KMMKSAIMKD LYSEIERLKQ EVYAAREKNG IYIPKERYTQ EEAEKKAMAD KIEQMEVEGE AKDKQIIDLQ ELYNSEQLVT AGLREKLDKT EKKLYETEQA
0501: LLDLEEKHRQ AVATIKEKEY LISNLLKSEK TLVDRAVELQ AELANAASDV SNLFAKIGRK DKIEDSNRSL IQDFQSQLLR QLELLNNSVA GSVSQQEKQL
0601: QDMENVMVSF VSAKTKATET LRGSLAQLKE KYNTGIKSLD DIAGNLDKDS QSTLNDLNSE VTKHSCALED MFKGFTSEAY TLLEGLQGSL HNQEEKLSAF
0701: TQQQRDLHSR SMDSAKSVST VMLDFFKTLD THANKLTKLA EDAQNVNEQK LSAFTKKFEE SIANEEKQML EKVAELLASS NARKKELVQI AVQDIRQGSS
0801: SQTGALQQEM SAMQDSASSI KVQWNSHIVQ AESHHLDNIS AVEVAKEDMQ KMHLKCLENS KTGTQQWKTA QESLVDLEKR NVATADSIIR GAIENNEKLR
0901: TQFSSAVSTT LSDVDSSNRE IISSIDNSLQ LDKDASTDVN STIVPCSENL KELRTHHDDN VVEIKQNTGK CLGHEYKVDE ATSSTPRKRE YNIPTVGSIE
1001: ELKTPSFEEL LKAFHDCKSP KQMQNGEAKH VSNGRPPLTA IN
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT2G28620]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.