Factsheet for AT2G28620.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77192	Canola	cytosol, plastid	92.23	91.87
Bra035686.1-P	Field mustard	plastid	92.23	91.79
CDY31717	Canola	cytosol, plastid	92.03	91.59
AT3G45850.1	Thale cress	cytosol, plastid	69.58	68.08
PGSC0003DMT400040181	Potato	cytosol, plastid	67.56	66.86
Solyc11g072820.1.1	Tomato	cytosol, plastid	67.47	66.83
PGSC0003DMT400078142	Potato	cytosol, plastid	65.83	65.71
Solyc06g075580.2.1	Tomato	cytosol, plastid	65.74	65.61
GSMUA_Achr9P04070_001	Banana	cytosol	64.2	63.65
GSMUA_Achr7P15420_001	Banana	cytosol	62.57	61.8
Os05t0117798-01	Rice	cytosol	62.0	61.17
GSMUA_Achr2P19060_001	Banana	cytosol	60.08	61.01
EES18930	Sorghum	cytosol	61.23	60.65
Zm00001d035526_P010	Maize	cytosol	60.56	59.53
TraesCS1D01G055200.1	Wheat	cytosol	60.36	59.34
TraesCS1B01G071500.1	Wheat	cytosol	60.27	59.25
TraesCS1A01G054400.2	Wheat	cytosol	60.56	59.03
GSMUA_Achr6P33290_001	Banana	cytosol	58.16	58.66
HORVU1Hr1G010810.1	Barley	cytosol	60.46	57.96
TraesCS5B01G156500.1	Wheat	plastid	55.85	54.7
TraesCS5D01G162500.1	Wheat	cytosol, plastid	55.66	54.61
HORVU5Hr1G049180.2	Barley	plastid	55.57	54.42
TraesCS5A01G157200.1	Wheat	plastid	54.89	53.76
EES09071	Sorghum	plastid	55.85	53.05
Zm00001d030230_P003	Maize	plastid	53.74	51.14
OQU78566	Sorghum	cytosol	56.43	50.3
AT2G36200.2	Thale cress	cytosol	44.34	44.42
AT2G37420.2	Thale cress	cytosol	42.9	43.02
AT1G59540.1	Thale cress	cytosol	16.89	21.39
AT4G38950.1	Thale cress	nucleus	15.83	19.74
AT3G50240.1	Thale cress	plastid	19.77	19.6
AT5G47820.1	Thale cress	cytosol	19.29	19.42
AT2G21300.1	Thale cress	nucleus	15.93	19.26
AT1G21730.1	Thale cress	plastid	15.93	18.65
AT5G06670.1	Thale cress	cytosol	17.47	18.46
AT4G39050.1	Thale cress	plastid	18.14	17.91
AT1G18370.1	Thale cress	plastid	16.51	17.66
AT3G43210.5	Thale cress	cytosol	15.74	17.48
AT3G12020.3	Thale cress	cytosol, plastid	17.47	17.43
AT2G21380.2	Thale cress	plastid	17.47	17.2
AT3G44050.1	Thale cress	cytosol, plastid	20.54	16.94
AT4G14150.1	Thale cress	cytosol, plastid	20.25	16.33
AT3G51150.2	Thale cress	cytosol	16.41	16.22
AT5G66310.1	Thale cress	cytosol	16.51	16.18
AT3G23670.1	Thale cress	cytosol	19.87	15.77
AT4G24170.1	Thale cress	cytosol	15.07	15.64
AT3G10180.1	Thale cress	cytosol	18.62	15.24
AT5G60930.2	Thale cress	cytosol	19.48	15.21
AT3G20150.1	Thale cress	plastid	15.26	14.27
AT5G42490.1	Thale cress	cytosol	12.09	11.59
AT3G17360.3	Thale cress	cytosol	21.31	10.7
AT3G19050.1	Thale cress	cytosol	23.7	8.91

Protein Annotations

MapMan:20.1.3.4	Gene3D:3.40.850.10	EntrezGene:817411	UniProt:A0A178VZA1	UniProt:A0A1P8AY44	ProteinID:ANM61564.1
ProteinID:ANM61565.1	ArrayExpress:AT2G28620	EnsemblPlantsGene:AT2G28620	RefSeq:AT2G28620	TAIR:AT2G28620	RefSeq:AT2G28620-TAIR-G
EnsemblPlants:AT2G28620.2	Unigene:At.52953	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961
InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	RefSeq:NP_001323772.1	RefSeq:NP_001323773.1
ProteinID:OAP11597.1	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF517	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0007E1E4A9	SEG:seg

Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT2G28620]

Coordinates

chr2:-:12264928..12270763

Molecular Weight (calculated)

116301.0 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.655

Length

1042 amino acids

Sequence
(BLAST)

0001: MDSNNSKKGS SVKSPCQTPR STEKSNRDFR VDSNSNSNPV SKNEKEKGVN IQVIVRCRPF NSEETRLQTP AVLTCNDRKK EVAVAQNIAG KQIDKTFLFD
0101: KVFGPTSQQK DLYHQAVSPI VFEVLDGYNC TIFAYGQTGT GKTYTMEGGA RKKNGEIPSD AGVIPRAVKQ IFDILEAQSA AEYSLKVSFL ELYNEELTDL
0201: LAPEETKFAD DKSKKPLALM EDGKGGVFVR GLEEEIVSTA DEIYKVLEKG SAKRRTAETL LNKQSSRSHS IFSVTIHIKE CTPEGEEIVK SGKLNLVDLA
0301: GSENISRSGA REGRAREAGE INKSLLTLGR VINALVEHSG HIPYRESKLT RLLRDSLGGK TKTCVIATVS PSVHCLEETL STLDYAHRAK HIKNKPEVNQ
0401: KMMKSAIMKD LYSEIERLKQ EVYAAREKNG IYIPKERYTQ EEAEKKAMAD KIEQMEVEGE AKDKQIIDLQ ELYNSEQLVT AGLREKLDKT EKKLYETEQA
0501: LLDLEEKHRQ AVATIKEKEY LISNLLKSEK TLVDRAVELQ AELANAASDV SNLFAKIERK DKIEDSNRSL IQDFQSQLLR QLELLNNSVA GSVSQQEKQL
0601: QDMENVMVSF VSAKTKATET LRGSLAQLKE KYNTGIKSLD DIAGNLDKDS QSTLNDLNSE VTKHSCALED MFKGFTSEAY TLLEGLQGSL HNQEEKLSAF
0701: TQQQRDLHSR SMDSAKSVST VMLDFFKTLD THANKLTKLA EDAQNVNEQK LSAFTKKFEE SIANEEKQML EKVAELLASS NARKKELVQI AVQDIRQGSS
0801: SQTGALQQEM SAMQDSASSI KVQWNSHIVQ AESHHLDNIS AVEVAKEDMQ KMHLKCLENS KTGTQQWKTA QESLVDLEKR NVATADSIIR GAIENNEKLR
0901: TQFSSAVSTT LSDVDSSNRE IISSIDNSLQ LDKDASTDVN STIVPCSENL KELRTHHDDN VVEIKQNTGK CLGHEYKVDE ATSSTPRKRE YNIPTVGSIE
1001: ELKTPSFEEL LKAFHDCKSP KQMQNGEAKH VSNGRPPLTA IN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.