Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra005294.1-P | Field mustard | cytosol | 89.9 | 92.67 |
CDX75064 | Canola | cytosol | 89.9 | 92.67 |
Bra017256.1-P | Field mustard | cytosol | 89.04 | 91.77 |
CDX84151 | Canola | cytosol | 89.13 | 91.24 |
CDY43743 | Canola | nucleus | 82.5 | 90.6 |
VIT_08s0007g03090.t01 | Wine grape | nucleus | 69.52 | 71.66 |
PGSC0003DMT400023094 | Potato | cytosol | 68.17 | 70.41 |
Solyc09g010060.2.1 | Tomato | cytosol | 68.08 | 70.31 |
KRG96202 | Soybean | cytosol | 67.79 | 70.08 |
KRH67944 | Soybean | cytosol | 67.21 | 69.48 |
Solyc10g083310.1.1 | Tomato | cytosol | 66.25 | 68.22 |
GSMUA_Achr10P... | Banana | cytosol | 62.5 | 64.42 |
EES14087 | Sorghum | cytosol | 62.02 | 63.92 |
TraesCS7A01G279000.1 | Wheat | cytosol | 61.83 | 63.92 |
TraesCS7D01G278800.1 | Wheat | cytosol | 61.73 | 63.82 |
TraesCS7B01G181200.1 | Wheat | cytosol | 61.63 | 63.72 |
Zm00001d031943_P002 | Maize | cytosol | 61.83 | 63.54 |
HORVU7Hr1G059220.43 | Barley | cytosol | 61.92 | 60.87 |
Zm00001d049938_P011 | Maize | cytosol | 60.87 | 60.57 |
PGSC0003DMT400072611 | Potato | cytosol | 30.48 | 53.82 |
AT2G28620.2 | Thale cress | cytosol, plastid | 44.42 | 44.34 |
AT3G45850.1 | Thale cress | cytosol, plastid | 44.62 | 43.57 |
AT2G37420.2 | Thale cress | cytosol | 39.42 | 39.46 |
AT5G47820.1 | Thale cress | cytosol | 20.0 | 20.1 |
AT4G38950.1 | Thale cress | nucleus | 16.06 | 19.98 |
AT1G59540.1 | Thale cress | cytosol | 15.58 | 19.68 |
AT2G21300.1 | Thale cress | nucleus | 15.48 | 18.68 |
AT1G21730.1 | Thale cress | plastid | 15.96 | 18.65 |
AT3G50240.1 | Thale cress | plastid | 18.56 | 18.36 |
AT1G18370.1 | Thale cress | plastid | 16.73 | 17.86 |
AT5G06670.1 | Thale cress | cytosol | 16.92 | 17.85 |
AT3G43210.5 | Thale cress | cytosol | 16.06 | 17.8 |
AT4G39050.1 | Thale cress | plastid | 17.5 | 17.25 |
AT3G44050.1 | Thale cress | cytosol, plastid | 20.77 | 17.1 |
AT3G12020.3 | Thale cress | cytosol, plastid | 17.12 | 17.05 |
AT2G21380.2 | Thale cress | plastid | 17.31 | 17.01 |
AT4G24170.1 | Thale cress | cytosol | 15.87 | 16.43 |
AT5G60930.2 | Thale cress | cytosol | 20.19 | 15.73 |
AT4G14150.1 | Thale cress | cytosol, plastid | 18.75 | 15.09 |
AT3G51150.2 | Thale cress | cytosol | 15.1 | 14.9 |
AT5G66310.1 | Thale cress | cytosol | 15.19 | 14.86 |
AT3G23670.1 | Thale cress | cytosol | 18.56 | 14.7 |
AT3G10180.1 | Thale cress | cytosol | 17.98 | 14.69 |
AT3G20150.1 | Thale cress | plastid | 14.42 | 13.46 |
AT5G42490.1 | Thale cress | cytosol | 12.5 | 11.96 |
AT3G17360.3 | Thale cress | cytosol | 20.58 | 10.31 |
AT3G19050.1 | Thale cress | cytosol | 21.73 | 8.16 |
Protein Annotations
MapMan:20.1.3.4 | Gene3D:3.40.850.10 | EntrezGene:818192 | ProteinID:AEC09216.1 | ArrayExpress:AT2G36200 | EnsemblPlantsGene:AT2G36200 |
RefSeq:AT2G36200 | TAIR:AT2G36200 | RefSeq:AT2G36200-TAIR-G | EnsemblPlants:AT2G36200.2 | TAIR:AT2G36200.2 | Unigene:At.37578 |
ncoils:Coil | UniProt:F4ILV6 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 |
GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 | InterPro:Kinesin-like_fam |
InterPro:Kinesin_motor_CS | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | RefSeq:NP_001189688.1 | InterPro:P-loop_NTPase | PFAM:PF00225 |
PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 |
PO:PO:0025022 | PRINTS:PR00380 | ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF591 |
SMART:SM00129 | SUPFAM:SSF52540 | UniParc:UPI0001E92CFE | : | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4ILV6]
Coordinates
chr2:-:15179869..15185314
Molecular Weight (calculated)
117502.0 Da
IEP (calculated)
5.815
GRAVY (calculated)
-0.637
Length
1040 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSRHDKEKG VNVQVLLRCR PFSDDELRSN APQVLTCNDL QREVAVSQNI AGKHIDRVFT FDKVFGPSAQ QKDLYDQAVV PIVNEVLEGF NCTIFAYGQT
0101: GTGKTYTMEG ECRRSKSAPC GGLPAEAGVI PRAVKQIFDT LEGQQAEYSV KVTFLELYNE EITDLLAPED LSRVAAEEKQ KKPLPLMEDG KGGVLVRGLE
0201: EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS ITIHIKEATP EGEELIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIS
0301: ALVEHLGHVP YRDSKLTRLL RDSLGGRTKT CIIATVSPAV HCLEETLSTL DYAHRAKNIR NKPEVNQKMM KSTLIKDLYG EIERLKAEVY ASREKNGVYM
0401: PKERYYQEES ERKVMAEQIE QMGGQIENYQ KVSFFLLCRS KFYTYMWELH VNNGYLHICC DQQLEELQDK YVGQVRECSD LTTKLDITEK NLSQTCKVLA
0501: STNEELKKSQ YAMKEKDFII SEQKKSENVL VQQACILQSN LEKATKDNSS LHQKIGREDK LSADNRKVVD NYQVELSEQI SNLFNRVASC LSQQNVHLQG
0601: VNKLSQSRLE AHNKAILEMK KKVKASRDLY SSHLEAVQNV VRLHKANANA CLEEVSALTT SSACSIDEFL ASGDETTSSL FDELQSALSS HQGEMALFAR
0701: ELRQRFHTTM EQTQEMSEYT STFFQKLMEE SKNAETRAAE ANDSQINSII DFQKTYEAQS KSDTDKLIAD LTNLVSSHIR RQHELVDSRL HNFKDAVSSN
0801: KTFLDEHVSA VNNLTKDAKR KWETFSMQAE NEAREGADFS AAKHCRMELL LQQSVGHAES AFKHCKITHE SLKEMTSKQV TDVSSLVRSA CDSNEQHDAE
0901: VDSARTAAEK DVTKNSDDII QQIERMSEDE KASVSKILEN VRSHEKTLES FQQDQCCQAR CIEDKAQETF QQQYMEYEPT GATPTKNEPE IPTKATIESL
1001: RAMPIETLVE EFRENNSYES FATKETKPQQ LTRSPLSQVN
0101: GTGKTYTMEG ECRRSKSAPC GGLPAEAGVI PRAVKQIFDT LEGQQAEYSV KVTFLELYNE EITDLLAPED LSRVAAEEKQ KKPLPLMEDG KGGVLVRGLE
0201: EEIVTSANEI FTLLERGSSK RRTAETFLNK QSSRSHSLFS ITIHIKEATP EGEELIKCGK LNLVDLAGSE NISRSGARDG RAREAGEINK SLLTLGRVIS
0301: ALVEHLGHVP YRDSKLTRLL RDSLGGRTKT CIIATVSPAV HCLEETLSTL DYAHRAKNIR NKPEVNQKMM KSTLIKDLYG EIERLKAEVY ASREKNGVYM
0401: PKERYYQEES ERKVMAEQIE QMGGQIENYQ KVSFFLLCRS KFYTYMWELH VNNGYLHICC DQQLEELQDK YVGQVRECSD LTTKLDITEK NLSQTCKVLA
0501: STNEELKKSQ YAMKEKDFII SEQKKSENVL VQQACILQSN LEKATKDNSS LHQKIGREDK LSADNRKVVD NYQVELSEQI SNLFNRVASC LSQQNVHLQG
0601: VNKLSQSRLE AHNKAILEMK KKVKASRDLY SSHLEAVQNV VRLHKANANA CLEEVSALTT SSACSIDEFL ASGDETTSSL FDELQSALSS HQGEMALFAR
0701: ELRQRFHTTM EQTQEMSEYT STFFQKLMEE SKNAETRAAE ANDSQINSII DFQKTYEAQS KSDTDKLIAD LTNLVSSHIR RQHELVDSRL HNFKDAVSSN
0801: KTFLDEHVSA VNNLTKDAKR KWETFSMQAE NEAREGADFS AAKHCRMELL LQQSVGHAES AFKHCKITHE SLKEMTSKQV TDVSSLVRSA CDSNEQHDAE
0901: VDSARTAAEK DVTKNSDDII QQIERMSEDE KASVSKILEN VRSHEKTLES FQQDQCCQAR CIEDKAQETF QQQYMEYEPT GATPTKNEPE IPTKATIESL
1001: RAMPIETLVE EFRENNSYES FATKETKPQQ LTRSPLSQVN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.