Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012995.1-P | Field mustard | nucleus | 84.19 | 88.16 |
| CDY58692 | Canola | nucleus | 82.32 | 85.79 |
| CDY02183 | Canola | nucleus | 82.77 | 85.59 |
| CDY42843 | Canola | cytosol | 77.6 | 81.64 |
| CDY47004 | Canola | cytosol | 77.0 | 81.46 |
| Bra029345.1-P | Field mustard | cytosol | 77.08 | 80.77 |
| Solyc04g076310.2.1 | Tomato | cytosol, nucleus | 50.94 | 68.0 |
| VIT_18s0001g07550.t01 | Wine grape | cytosol | 59.4 | 66.42 |
| KRH16847 | Soybean | cytosol | 62.02 | 64.09 |
| PGSC0003DMT400024240 | Potato | cytosol | 58.05 | 63.94 |
| KRH72462 | Soybean | cytosol | 61.95 | 63.76 |
| GSMUA_Achr9P28230_001 | Banana | cytosol | 40.15 | 63.73 |
| KRH62222 | Soybean | nucleus | 58.5 | 61.35 |
| Zm00001d018009_P002 | Maize | cytosol | 54.23 | 57.41 |
| KXG30782 | Sorghum | cytosol | 54.16 | 57.15 |
| Zm00001d018014_P003 | Maize | cytosol | 53.86 | 57.02 |
| GSMUA_Achr5P23970_001 | Banana | cytosol | 54.68 | 56.33 |
| TraesCS2B01G229500.1 | Wheat | cytosol | 53.41 | 56.14 |
| TraesCS2D01G213200.1 | Wheat | cytosol | 52.96 | 55.8 |
| TraesCS2A01G202400.1 | Wheat | cytosol | 52.96 | 55.67 |
| AT5G47820.1 | Thale cress | cytosol | 38.05 | 49.08 |
| AT3G50240.1 | Thale cress | plastid | 35.51 | 45.1 |
| AT1G59540.1 | Thale cress | cytosol | 12.51 | 20.29 |
| AT2G36200.2 | Thale cress | cytosol | 15.73 | 20.19 |
| AT1G21730.1 | Thale cress | plastid | 13.41 | 20.11 |
| AT3G45850.1 | Thale cress | cytosol, plastid | 15.81 | 19.81 |
| AT2G28620.2 | Thale cress | cytosol, plastid | 15.21 | 19.48 |
| AT5G06670.1 | Thale cress | cytosol | 14.38 | 19.47 |
| AT2G37420.2 | Thale cress | cytosol | 15.06 | 19.35 |
| AT3G12020.3 | Thale cress | cytosol, plastid | 14.83 | 18.97 |
| AT3G43210.5 | Thale cress | cytosol | 12.73 | 18.12 |
| AT2G21300.1 | Thale cress | nucleus | 11.54 | 17.87 |
| AT4G38950.1 | Thale cress | nucleus | 11.16 | 17.82 |
| AT4G39050.1 | Thale cress | plastid | 14.08 | 17.82 |
| AT2G21380.2 | Thale cress | plastid | 14.08 | 17.77 |
| AT1G18370.1 | Thale cress | plastid | 12.88 | 17.66 |
| AT3G44050.1 | Thale cress | cytosol, plastid | 15.88 | 16.79 |
| AT4G14150.1 | Thale cress | cytosol, plastid | 15.88 | 16.41 |
| AT3G23670.1 | Thale cress | cytosol | 15.96 | 16.22 |
| AT4G24170.1 | Thale cress | cytosol | 12.13 | 16.14 |
| AT3G10180.1 | Thale cress | cytosol | 15.28 | 16.03 |
| AT5G66310.1 | Thale cress | cytosol | 12.51 | 15.71 |
| AT3G51150.2 | Thale cress | cytosol | 11.91 | 15.09 |
| AT3G20150.1 | Thale cress | plastid | 11.91 | 14.27 |
| AT3G17360.3 | Thale cress | cytosol | 18.35 | 11.81 |
| AT5G42490.1 | Thale cress | cytosol | 9.14 | 11.22 |
| AT3G19050.1 | Thale cress | cytosol | 18.65 | 8.99 |
Protein Annotations
| MapMan:20.1.3.3 | Gene3D:3.40.850.10 | EntrezGene:836214 | UniProt:A0A1P8BGU4 | ProteinID:ANM70804.1 | ArrayExpress:AT5G60930 |
| EnsemblPlantsGene:AT5G60930 | RefSeq:AT5G60930 | TAIR:AT5G60930 | RefSeq:AT5G60930-TAIR-G | EnsemblPlants:AT5G60930.2 | Unigene:At.29135 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 | InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_CS |
| InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | RefSeq:NP_001332385.1 | InterPro:P-loop_NTPase | PFAM:PF00225 | PRINTS:PR00380 |
| ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF748 | SMART:SM00129 | SUPFAM:SSF52540 |
| UniParc:UPI00000A62C0 | SEG:seg | : | : | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT5G60930]
Coordinates
chr5:-:24515281..24522743
Molecular Weight (calculated)
149692.0 Da
IEP (calculated)
7.522
GRAVY (calculated)
-0.794
Length
1335 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESTECVRVA VNIRPLITPE LLNGCTDCIT VAPKEPQVHI GSHTFTYDFV YGNGGYPCSE IYNHCVAPLV DALFKGYNAT VLAYGQTGSG KTYTMGTNYS
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTVKNSLKF PLFWSFQHIC VHVARKQQLS
1201: DLMKFWFQGK SNVPRPSQRK KWKKTVLQLV PVGPPALPPT HTNTHLIPEA NSVTVDSDTA RMPENSDSGE SNSIKLKLPR AMRSASSNGS NLLRERNADQ
1301: NGSESGGNSG FVQSNSGRAS GSRTSDEKEN HTRRV
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTVKNSLKF PLFWSFQHIC VHVARKQQLS
1201: DLMKFWFQGK SNVPRPSQRK KWKKTVLQLV PVGPPALPPT HTNTHLIPEA NSVTVDSDTA RMPENSDSGE SNSIKLKLPR AMRSASSNGS NLLRERNADQ
1301: NGSESGGNSG FVQSNSGRAS GSRTSDEKEN HTRRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.