Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58692 Canola nucleus 97.91 98.67
Bra012995.1-P Field mustard nucleus 95.97 97.18
AT5G60930.2 Thale cress cytosol 85.59 82.77
CDY47004 Canola cytosol 79.55 81.38
CDY42843 Canola cytosol 79.78 81.17
CDX75327 Canola nucleus 14.48 69.26
Solyc04g076310.2.1 Tomato cytosol, nucleus 53.29 68.8
VIT_18s0001g07550.t01 Wine grape cytosol 60.34 65.24
GSMUA_Achr9P28230_001 Banana cytosol 42.29 64.92
PGSC0003DMT400024240 Potato cytosol 60.34 64.27
KRH16847 Soybean cytosol 62.9 62.85
KRH72462 Soybean cytosol 62.66 62.37
KRH62222 Soybean nucleus 59.72 60.57
Zm00001d018009_P002 Maize cytosol 55.69 57.02
KXG30782 Sorghum cytosol 55.62 56.76
Zm00001d018014_P003 Maize cytosol 55.31 56.62
GSMUA_Achr5P23970_001 Banana cytosol 56.7 56.48
TraesCS2B01G229500.1 Wheat cytosol 54.76 55.67
TraesCS2A01G202400.1 Wheat cytosol 54.45 55.35
TraesCS2D01G213200.1 Wheat cytosol 54.3 55.33
CDX68941 Canola cytosol 19.75 53.35
CDX85308 Canola cytosol 39.89 50.05
CDX86343 Canola cytosol 39.43 49.47
CDY45912 Canola cytosol 39.27 49.27
CDY35769 Canola cytosol 39.35 49.13
CDY19973 Canola cytosol 39.12 48.79
CDY63235 Canola cytosol 39.19 48.7
CDY17754 Canola cytosol 36.72 46.06
CDY30599 Canola cytosol 36.41 45.81
CDX75326 Canola cytosol 9.06 32.14
CDX85120 Canola cytosol, plastid 9.22 28.81
CDY03483 Canola cytosol 3.87 28.25
CDX77491 Canola cytosol, plastid 7.36 26.03
CDY47900 Canola cytosol 12.24 22.87
CDY01095 Canola cytosol, plastid 15.72 20.88
CDY08463 Canola cytosol, plastid 15.72 20.88
CDX75064 Canola cytosol 16.27 20.81
CDX84151 Canola cytosol 16.11 20.47
CDY67829 Canola cytosol 13.09 20.46
CDY67820 Canola cytosol 13.09 20.46
CDX82979 Canola cytosol, plastid 16.73 20.34
CDY22404 Canola nucleus 12.08 20.31
CDY23691 Canola cytosol, plastid 16.58 20.15
CDY08179 Canola plastid 13.94 20.04
CDY14073 Canola plastid 15.1 19.96
CDY04671 Canola plastid 13.87 19.93
CDY04998 Canola plastid 14.95 19.79
CDY41952 Canola nucleus 12.32 19.56
CDY31717 Canola cytosol, plastid 15.8 19.48
CDX77192 Canola cytosol, plastid 15.72 19.41
CDY42594 Canola nucleus 12.32 19.34
CDY34261 Canola cytosol 12.24 18.65
CDY45884 Canola cytosol, plastid 9.45 18.57
CDX72718 Canola plastid 14.48 18.39
CDX93381 Canola cytosol, plastid 15.65 18.35
CDY27279 Canola cytosol 11.54 18.26
CDY13822 Canola nucleus 12.16 18.21
CDY44836 Canola cytosol 12.78 18.15
CDY22394 Canola plastid 14.56 18.13
CDY21709 Canola plastid 13.32 18.12
CDY30956 Canola cytosol, plastid 12.78 18.11
CDX82016 Canola nucleus 12.08 18.1
CDY18447 Canola cytosol, plastid 15.72 18.08
CDX81870 Canola plastid 13.32 18.05
CDX90305 Canola plastid 14.41 18.01
CDX99601 Canola nucleus 11.39 17.97
CDY12116 Canola plastid 14.33 17.91
CDY15900 Canola nucleus 11.7 17.89
CDY19208 Canola cytosol 13.4 17.76
CDY26167 Canola cytosol, plastid 13.4 17.65
CDY43743 Canola nucleus 12.94 17.63
CDX82022 Canola plastid 14.18 17.09
CDX73746 Canola cytosol 12.78 17.05
CDX77978 Canola cytosol 12.86 16.82
CDY30779 Canola cytosol 12.86 16.78
CDY03482 Canola cytosol 12.39 16.75
CDY55295 Canola cytosol 16.34 16.63
CDY29004 Canola cytosol 13.01 16.62
CDX87944 Canola cytosol 16.19 16.53
CDY45220 Canola cytosol 12.94 16.45
CDX90660 Canola cytosol 13.01 16.41
CDY18100 Canola cytosol, plastid 16.5 16.3
CDY56229 Canola cytosol, plastid 16.58 16.27
CDX74009 Canola cytosol 15.41 15.87
CDY36055 Canola plastid 12.86 15.65
CDY07951 Canola cytosol 15.26 15.33
CDX82261 Canola plastid 13.48 14.25
CDX72728 Canola cytosol 7.82 13.7
CDY71066 Canola cytosol, mitochondrion 7.51 13.11
CDY70999 Canola cytosol, mitochondrion 7.51 13.07
CDX92129 Canola cytosol 17.58 11.88
CDX95855 Canola cytosol 18.59 11.86
CDY12957 Canola cytosol 6.35 9.93
CDX92299 Canola cytosol 19.29 9.13
CDX99277 Canola cytosol 19.05 9.09
CDY02395 Canola nucleus 2.79 5.36
Protein Annotations
MapMan:20.1.3.3Gene3D:3.40.850.10GO:A0A078ERL9EnsemblPlants:CDY02183ProteinID:CDY02183ProteinID:CDY02183.1
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00113591001InterPro:IPR001752InterPro:IPR036961InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_CSInterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sfInterPro:P-loop_NTPasePFAM:PF00225PRINTS:PR00380
ScanProsite:PS00411PFscan:PS50067PANTHER:PTHR24115PANTHER:PTHR24115:SF748SMART:SM00129SMART:SM01114
SUPFAM:SSF52540InterPro:Tesmin/TSO1-like_CXCUniParc:UPI0004EE1E61SEG:seg::
Description
BnaA03g39840D
Coordinates
chrLK031932:+:555764..562281
Molecular Weight (calculated)
144552.0 Da
IEP (calculated)
7.161
GRAVY (calculated)
-0.730
Length
1291 amino acids
Sequence
(BLAST)
0001: MEAAECVKVA VNIRPLITPE LLNGCTDCIT VVPKEPQVHI GSHTFTYDFV FGNAGLPCLE IYDHCCSPLV DALFKGYNAT VLAYGQTGSG KTYTMGTNYS
0101: GDGTNCGIIP KVMEDIFKRV GTTKDSTELL IRVSFIEIFK EEVFDLLDSN SSALLKNDGA VQAKHVALSR APIQIRETAG GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLAR ATGSTNMNSQ SSRSHAIFTI TLEQKKISSC SSTMTEDAGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP AAAQMQRMRS QIEQLQTELL FYRGDSGGFD
0401: ELQILKHKVA LLETSNRELQ NELQERRVAC EHFSKRAYDA QVEKDKLIMK IESVRNGKSL DEIESCQDED VGLINKYVSK IQELEGELLH VRSLKKVSNY
0501: KYFESIDSPD DGPRSSNVLF PSSNESSDCE DKVIDVAVCA DEVEFQEKEL EHCSLQEKLD MELKELDKRL EEKEAEMKRY SSGGTSVLKQ HYEKKVHELE
0601: QEKRALQREI EGLRQNLASI PSAPGDGAQK LKESYLQKLN TLETQVSELK KKQDAQAQLL RQKQKSDDAA RKLQDEIHRI KSQKVQLQQK IKQESEQFRA
0701: WKASREKEVM QLKKEGRRNE YEMHKLMALN QKQKLVLQRK TEEASQATKR LKELLENRKA SSRETLSGAS ANGPGTQALM QAIEHEIEVT VRVHEVRSEY
0801: ERQMEERARM AKEVARLREE TELLKNAKIS VDDDTMSPGA RNSRIFALEN MLATSSNTLV SMASQLSEAE ERERVFGGRG RWNQVRTLGD AKSIMNYLFN
0901: LASTARCLAR DREADCREKD VLIRDLKEKI VKFSSFVRYL EIQKADLAHQ VKAQASELIK RSAEENLNNE HSLKKQEARN SVIVHEDMDT SDSDDSDHER
1001: EDPDLDDEWK PEQESERESE QESVIKLNRK RNFKVGRRRS SVVPRRSYEE NLDSPSDEAV KPTSTSDVCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS
1101: VKCSNRNADG KQNNSTSILE HSESSQEEQQ QVLASRGALL LQNALADKPV EETNNDGEGT RTRRKPLSDI GNTTGKTNVP KPMKRRKWRK PLLQLVVDPP
1201: PATTTPTSSQ EPSDSGEANN TKLKLPRSMT SKGSNMLRER NADQGGAVLV GQVEVQLQMK KRTTLVGSNQ ETETLLDERG KMGLDLFLII R
Best Arabidopsis Sequence Match ( AT5G60930.1 )
(BLAST)
0001: MESTECVRVA VNIRPLITPE LLNGCTDCIT VAPKEPQVHI GSHTFTYDFV YGNGGYPCSE IYNHCVAPLV DALFKGYNAT VLAYGQTGSG KTYTMGTNYS
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTGKSNVPR PSQRKKWKKT VLQLVPVGPP
1201: ALPPTHTNTH LIPEANSVTV DSDTARMPEN SDSGESNSIK LKLPRAMRAI RVGQVEVELQ MKRRTTLVGS KEETSLEVPV VNFLRQIQLL KFEV
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT5G60930]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.