Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G202400.1 | Wheat | cytosol | 98.27 | 98.27 |
| TraesCS2D01G213200.1 | Wheat | cytosol | 97.8 | 98.03 |
| KXG30782 | Sorghum | cytosol | 72.44 | 72.73 |
| Zm00001d018009_P002 | Maize | cytosol | 71.89 | 72.4 |
| Zm00001d018014_P003 | Maize | cytosol | 71.65 | 72.16 |
| GSMUA_Achr9P28230_001 | Banana | cytosol | 44.17 | 66.71 |
| Solyc04g076310.2.1 | Tomato | cytosol, nucleus | 50.39 | 64.0 |
| GSMUA_Achr5P23970_001 | Banana | cytosol | 62.13 | 60.88 |
| PGSC0003DMT400024240 | Potato | cytosol | 56.93 | 59.65 |
| VIT_18s0001g07550.t01 | Wine grape | cytosol | 54.96 | 58.46 |
| KRH72462 | Soybean | cytosol | 59.37 | 58.13 |
| KRH16847 | Soybean | cytosol | 59.13 | 58.13 |
| KRH62222 | Soybean | nucleus | 56.22 | 56.09 |
| Bra012995.1-P | Field mustard | nucleus | 56.06 | 55.84 |
| CDY42843 | Canola | cytosol | 55.75 | 55.79 |
| CDY47004 | Canola | cytosol | 55.43 | 55.78 |
| CDY58692 | Canola | nucleus | 55.67 | 55.19 |
| Bra029345.1-P | Field mustard | cytosol | 55.35 | 55.18 |
| CDY02183 | Canola | nucleus | 55.67 | 54.76 |
| AT5G60930.2 | Thale cress | cytosol | 56.14 | 53.41 |
| TraesCS5B01G159100.1 | Wheat | cytosol | 38.98 | 47.97 |
| TraesCS6B01G365300.2 | Wheat | cytosol, mitochondrion, plastid | 15.67 | 19.9 |
| TraesCS7B01G071700.1 | Wheat | plastid | 15.2 | 19.59 |
| TraesCS6B01G285500.3 | Wheat | cytosol | 13.31 | 19.4 |
| TraesCS1B01G071500.1 | Wheat | cytosol | 15.98 | 19.15 |
| TraesCS7B01G181200.1 | Wheat | cytosol | 14.88 | 18.79 |
| TraesCS5B01G156500.1 | Wheat | plastid | 15.67 | 18.7 |
| TraesCS5B01G317600.1 | Wheat | cytosol | 12.76 | 18.24 |
| TraesCS5B01G400900.1 | Wheat | plastid | 13.62 | 18.13 |
| TraesCS6B01G132300.1 | Wheat | plastid | 13.54 | 18.12 |
| TraesCS2B01G293400.1 | Wheat | cytosol, plastid | 15.91 | 17.78 |
| TraesCS5B01G222600.2 | Wheat | cytosol | 17.09 | 17.74 |
| TraesCS1B01G202600.1 | Wheat | plastid | 14.41 | 17.58 |
| TraesCS2B01G405200.1 | Wheat | nucleus | 12.76 | 17.27 |
| TraesCS5B01G395000.1 | Wheat | cytosol | 17.32 | 17.17 |
| TraesCS4B01G203300.1 | Wheat | cytosol, plastid | 14.25 | 17.14 |
| TraesCS2B01G322300.2 | Wheat | cytosol, plastid | 15.2 | 16.77 |
| TraesCS7B01G169100.2 | Wheat | nucleus | 13.7 | 16.65 |
| TraesCS5B01G037500.1 | Wheat | mitochondrion | 14.17 | 16.29 |
| TraesCS2B01G174600.1 | Wheat | cytosol, plastid | 18.03 | 10.6 |
| TraesCS5B01G074200.1 | Wheat | cytosol | 19.13 | 8.07 |
Protein Annotations
| MapMan:20.1.3.3 | Gene3D:3.40.850.10 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 |
| InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_CS | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00225 |
| PRINTS:PR00380 | ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 | PANTHER:PTHR24115:SF748 | SMART:SM00129 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2B01G229500 | EnsemblPlants:TraesCS2B01G229500.1 | TIGR:cd01372 | SEG:seg | : |
Description
No Description!
Coordinates
chr2B:+:225243603..225251841
Molecular Weight (calculated)
141094.0 Da
IEP (calculated)
7.062
GRAVY (calculated)
-0.730
Length
1270 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSSDMASQP QSDSVKVAVN VRPLITPELV LGCTDCVTVT PGEPQVQIGP HIFTYDHVYG STGSSSSLIF EQCVYPLVDS LFCGYNTTVL AYGQTGSGKT
0101: YTMGTNYSGE SNCGGIIPQV METIFKKADA MKGDTEFLIR VSFIEIFKEE VFDLLDDPGS VAKAAAPARV PIQIRETANG SITLAGVTEA EVKSKEEMAL
0201: HLARGSLSRA TGSTNMNSQS SRSHAIFTIS IEQKRTSSSA SEKSTSNEYD ILSSKFHLVD LAGSERAKRT GADGLRLKEG IHINRGLLAL GNVISALGDE
0301: KKRKEGAFVP YRDSKLTRLL QDSLGGNSKT VMIACISPAD SNAEETINTL KYANRARNIQ NKAVINRDPV TAEMQKLRSQ LEQLQSELLF SRSGSAALEE
0401: LQLLQQKVSL LELKNSELYC ELKEREMSCE QLAQRAVAAQ LEKDQLMLKL ESARNGKSWD DIENAGSEQD VDLMKTYLSK IQQLEAEVTR QKFSTACRNG
0501: LHDRLALDKG MLLDDLGSGC EVGTLEVSSE VDEEEKEREH SSIQEKLDME LQDLDKRLQQ KEAEMKQFAK SDTSVLKQHY ETKLHEMEQE KKAFQKEIED
0601: LRHALAKISS STDECSHKMK ENYLQKMNML ETQVSQLKKK QDAHQQLLRQ KQKSDDAAMR LQGEIQRIKS QKVQLQQKIK QESEQFRSWK AAREKEVLQL
0701: KKEGRRNEYE MHKLLALNQK QKMVLQRKTE EATMATKRLK DLLEAKKSTR DAHGTGASGI QALMRTIDDE LEVTVRAYEL RSHYDRQIQE RATISKEIAK
0801: LKECPEAMSP SARSSRISAL ENMLSSSSSA MVSMASQLSE AEERERVFSG RGRWNHVRSL PDAKNTMNYL FQLASSSRCQ LHDKEVMCIE KDLIIGELKE
0901: KVVALNGRTR QLEAQVNDLH NQNMQLFAAM NNAKKSGRAS RRDTTIDPED GQIYALRKSA RGSQFKHGKN SFYWSDDMDI SDAEESGELE DMSDDGSDTD
1001: WVESSRKINN TRRRTSNPSR NNSLTDVKSE MPSQEIPTIQ KEHASSQCCS CSSKSLCKLT RYCECRALGS QCGTGCGCNA SNCSNRVRVV KEEIDDEPPS
1101: EKEGSEFGNV SSSENDAKMK EEVKQGIMLL ENAVAEKETQ QPKSRKPLAD IGNTDGKQGG AKPKQQRKNW RKSATIQLVP TEPPPPASAS APDNAEAAPQ
1201: NRADIPLRLP RAMSSASAAE SNPLTDRNAS KAGETVSSNK ENGSVATRAP APAPARSRKN AAMEKENHLG
0101: YTMGTNYSGE SNCGGIIPQV METIFKKADA MKGDTEFLIR VSFIEIFKEE VFDLLDDPGS VAKAAAPARV PIQIRETANG SITLAGVTEA EVKSKEEMAL
0201: HLARGSLSRA TGSTNMNSQS SRSHAIFTIS IEQKRTSSSA SEKSTSNEYD ILSSKFHLVD LAGSERAKRT GADGLRLKEG IHINRGLLAL GNVISALGDE
0301: KKRKEGAFVP YRDSKLTRLL QDSLGGNSKT VMIACISPAD SNAEETINTL KYANRARNIQ NKAVINRDPV TAEMQKLRSQ LEQLQSELLF SRSGSAALEE
0401: LQLLQQKVSL LELKNSELYC ELKEREMSCE QLAQRAVAAQ LEKDQLMLKL ESARNGKSWD DIENAGSEQD VDLMKTYLSK IQQLEAEVTR QKFSTACRNG
0501: LHDRLALDKG MLLDDLGSGC EVGTLEVSSE VDEEEKEREH SSIQEKLDME LQDLDKRLQQ KEAEMKQFAK SDTSVLKQHY ETKLHEMEQE KKAFQKEIED
0601: LRHALAKISS STDECSHKMK ENYLQKMNML ETQVSQLKKK QDAHQQLLRQ KQKSDDAAMR LQGEIQRIKS QKVQLQQKIK QESEQFRSWK AAREKEVLQL
0701: KKEGRRNEYE MHKLLALNQK QKMVLQRKTE EATMATKRLK DLLEAKKSTR DAHGTGASGI QALMRTIDDE LEVTVRAYEL RSHYDRQIQE RATISKEIAK
0801: LKECPEAMSP SARSSRISAL ENMLSSSSSA MVSMASQLSE AEERERVFSG RGRWNHVRSL PDAKNTMNYL FQLASSSRCQ LHDKEVMCIE KDLIIGELKE
0901: KVVALNGRTR QLEAQVNDLH NQNMQLFAAM NNAKKSGRAS RRDTTIDPED GQIYALRKSA RGSQFKHGKN SFYWSDDMDI SDAEESGELE DMSDDGSDTD
1001: WVESSRKINN TRRRTSNPSR NNSLTDVKSE MPSQEIPTIQ KEHASSQCCS CSSKSLCKLT RYCECRALGS QCGTGCGCNA SNCSNRVRVV KEEIDDEPPS
1101: EKEGSEFGNV SSSENDAKMK EEVKQGIMLL ENAVAEKETQ QPKSRKPLAD IGNTDGKQGG AKPKQQRKNW RKSATIQLVP TEPPPPASAS APDNAEAAPQ
1201: NRADIPLRLP RAMSSASAAE SNPLTDRNAS KAGETVSSNK ENGSVATRAP APAPARSRKN AAMEKENHLG
0001: MESTECVRVA VNIRPLITPE LLNGCTDCIT VAPKEPQVHI GSHTFTYDFV YGNGGYPCSE IYNHCVAPLV DALFKGYNAT VLAYGQTGSG KTYTMGTNYS
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTGKSNVPR PSQRKKWKKT VLQLVPVGPP
1201: ALPPTHTNTH LIPEANSVTV DSDTARMPEN SDSGESNSIK LKLPRAMRSA SSNGSNLLRE RNADQNGSES GGNSGFVQSN SGRASGSRTS DEKENHTRRV
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTGKSNVPR PSQRKKWKKT VLQLVPVGPP
1201: ALPPTHTNTH LIPEANSVTV DSDTARMPEN SDSGESNSIK LKLPRAMRSA SSNGSNLLRE RNADQNGSES GGNSGFVQSN SGRASGSRTS DEKENHTRRV
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT5G60930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.