Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g076310.2.1 | Tomato | cytosol, nucleus | 58.04 | 69.3 |
| PGSC0003DMT400024240 | Potato | cytosol | 66.58 | 65.59 |
| KRH72462 | Soybean | cytosol | 69.85 | 64.3 |
| KRH16847 | Soybean | cytosol | 69.43 | 64.16 |
| GSMUA_Achr9P28230_001 | Banana | cytosol | 44.72 | 63.5 |
| KRH62222 | Soybean | nucleus | 66.83 | 62.69 |
| Bra012995.1-P | Field mustard | nucleus | 65.41 | 61.25 |
| CDY58692 | Canola | nucleus | 65.16 | 60.73 |
| CDY02183 | Canola | nucleus | 65.24 | 60.34 |
| AT5G60930.2 | Thale cress | cytosol | 66.42 | 59.4 |
| CDY42843 | Canola | cytosol | 63.07 | 59.34 |
| CDY47004 | Canola | cytosol | 62.4 | 59.03 |
| GSMUA_Achr5P23970_001 | Banana | cytosol | 63.74 | 58.72 |
| Bra029345.1-P | Field mustard | cytosol | 62.65 | 58.71 |
| Zm00001d018009_P002 | Maize | cytosol | 58.46 | 55.35 |
| KXG30782 | Sorghum | cytosol | 58.54 | 55.26 |
| TraesCS2B01G229500.1 | Wheat | cytosol | 58.46 | 54.96 |
| TraesCS2D01G213200.1 | Wheat | cytosol | 58.29 | 54.93 |
| Zm00001d018014_P003 | Maize | cytosol | 57.96 | 54.88 |
| TraesCS2A01G202400.1 | Wheat | cytosol | 58.21 | 54.72 |
| VIT_07s0031g00130.t01 | Wine grape | cytosol | 42.13 | 46.62 |
| VIT_18s0001g10090.t01 | Wine grape | cytosol | 41.88 | 46.43 |
| VIT_16s0050g02080.t01 | Wine grape | cytosol, mitochondrion | 4.69 | 24.56 |
| VIT_18s0001g08700.t01 | Wine grape | cytosol | 13.15 | 18.69 |
| VIT_08s0007g06820.t01 | Wine grape | plastid | 15.58 | 18.64 |
| VIT_06s0004g03810.t01 | Wine grape | plastid | 16.08 | 18.29 |
| VIT_08s0040g02590.t01 | Wine grape | plastid | 15.16 | 17.25 |
| VIT_08s0007g03090.t01 | Wine grape | nucleus | 14.41 | 17.05 |
| VIT_11s0016g00460.t01 | Wine grape | cytosol | 13.32 | 16.86 |
| VIT_17s0000g03290.t01 | Wine grape | cytosol, plastid | 13.48 | 16.74 |
| VIT_18s0001g02380.t01 | Wine grape | plastid | 15.41 | 16.25 |
| VIT_04s0023g03060.t01 | Wine grape | cytosol | 13.23 | 16.24 |
| VIT_03s0038g00700.t01 | Wine grape | nucleus | 13.07 | 16.1 |
| VIT_18s0001g13580.t01 | Wine grape | cytosol | 13.07 | 16.05 |
| VIT_03s0038g00350.t01 | Wine grape | plastid | 14.24 | 15.44 |
| VIT_08s0007g05340.t01 | Wine grape | cytosol | 16.16 | 15.44 |
| VIT_05s0029g00400.t01 | Wine grape | cytosol, plastid | 17.09 | 15.22 |
| VIT_06s0009g00820.t01 | Wine grape | cytosol | 17.59 | 14.43 |
| VIT_19s0090g01600.t01 | Wine grape | cytosol, plastid | 14.07 | 14.04 |
| VIT_05s0020g00620.t01 | Wine grape | cytosol | 15.83 | 9.72 |
| VIT_03s0063g01120.t01 | Wine grape | cytosol | 19.01 | 8.45 |
Protein Annotations
| EntrezGene:100247280 | wikigene:100247280 | MapMan:20.1.3.3 | Gene3D:3.40.850.10 | ProteinID:CCB45658 | ProteinID:CCB45658.1 |
| ncoils:Coil | UniProt:F6H136 | EMBL:FN595227 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005871 | GO:GO:0007018 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0008574 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR001752 | InterPro:IPR036961 |
| InterPro:Kinesin-like_fam | InterPro:Kinesin_motor_CS | InterPro:Kinesin_motor_dom | InterPro:Kinesin_motor_dom_sf | EntrezGene:LOC100247280 | wikigene:LOC100247280 |
| InterPro:P-loop_NTPase | PFAM:PF00225 | PRINTS:PR00380 | ScanProsite:PS00411 | PFscan:PS50067 | PANTHER:PTHR24115 |
| PANTHER:PTHR24115:SF748 | SMART:SM00129 | SUPFAM:SSF52540 | UniParc:UPI0002108CA7 | ArrayExpress:VIT_18s0001g07550 | EnsemblPlantsGene:VIT_18s0001g07550 |
| EnsemblPlants:VIT_18s0001g07550.t01 | RefSeq:XP_002283825 | RefSeq:XP_002283825.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr18:+:5807852..5821070
Molecular Weight (calculated)
133769.0 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.763
Length
1194 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVSRAECVR VAVNIRPLIT SELLIGCTDC ITVVPGEPQT GSGKTYTMGT NYTGEESSGG IIPKVMESIF SRVEAMKDST EFLIRVSFIE IFKEEVFDLL
0101: DPNSSATSKV EGVCVTKPTG PARVPIQIRE TVSGGITLAG VTEAEVRTKE EMASYLSHGS TARATGSTNM NSQSSRSHAI FTISMEQKKI ARVGVSNDDV
0201: GDDILCAKLH LVDLAGSERA KRTGADGMRF KEGIHINKGL LALGNVISAL GDEKKRKEGG HDSLGGNSKT VMIACVSPAD TNAEETLNTL KYANRARNIQ
0301: NKAVINRDPM AAQMQRMRSQ IEQLQSELLY FRGDAGAPFE ELQILKHKIS LLEESNAELQ RELQERRITC DHLTQRALDA QVEKDKLIMK IESARNGKSW
0401: DEMESDSDQN FSLLKSYVSK IQELEGELLH LQSLNSSKHS DFVVDGTDLD DDSLRAKNAY FRSLNELSSA CDTKGEIEDD EKELEYTSLQ EKFDMELKEL
0501: DKKLEQKEAE MKRFASADTS VLKLHYEKKL LELEQEKKAL QKEIEELRHD LASISSTSDD GAQKLKEDYL QKLNVLEKQV SELKKKQDAQ SQLLRQKQKS
0601: DEAAKRLQDE IQRIKSQKVQ LQHKIKQESE QFRLWKASRE KEVLQLKKEG RRNEYEMHKL LALNQRQKMV LQRKTEEASM ATKRLKELLE SRKASSRETL
0701: GAGNGNGPGV QALMQAIEHE LEVTVRVHEV RSQYEHQMEE RARMAREVAK LKEEADMLKQ KDFGSFPETM SPGARNSRIF ALENMLTTSS STLVSMASQL
0801: SEAEERERVF SGRGRWNQVR SLAEAKNMMN YLFNLASSSR CKLWDKELDS REKDSEIRDL KEKVVKLSGL VRQLEIQKAE LLHREKLQKL ASKKHDMDNA
0901: GRKYDFREGP RRSVILLEDM DTSESEHSST DSADDDDWVE SGKRPRKKRN SKAGGQSRVG SDISSSENLR TENSGICCSC SKSSFCKLKK CECRAAGGTC
1001: RDSCSCAPNK CTNRETIKVE ELDDFLQSAV AEGIGNLSGS DDTQKYHDLA SHGAMLLQSA LVDEPAEAND DCESKRKPLS EIGNKMARAK APKPNPRKKW
1101: RKSVIQLVSV APPSSQPENT EAPKKAENTA VEVDIPLKLP RAMRSAASNG NPFRVRNSDQ PDESAANNKE TVASASRSPV RQARTLDEKE NYGP
0101: DPNSSATSKV EGVCVTKPTG PARVPIQIRE TVSGGITLAG VTEAEVRTKE EMASYLSHGS TARATGSTNM NSQSSRSHAI FTISMEQKKI ARVGVSNDDV
0201: GDDILCAKLH LVDLAGSERA KRTGADGMRF KEGIHINKGL LALGNVISAL GDEKKRKEGG HDSLGGNSKT VMIACVSPAD TNAEETLNTL KYANRARNIQ
0301: NKAVINRDPM AAQMQRMRSQ IEQLQSELLY FRGDAGAPFE ELQILKHKIS LLEESNAELQ RELQERRITC DHLTQRALDA QVEKDKLIMK IESARNGKSW
0401: DEMESDSDQN FSLLKSYVSK IQELEGELLH LQSLNSSKHS DFVVDGTDLD DDSLRAKNAY FRSLNELSSA CDTKGEIEDD EKELEYTSLQ EKFDMELKEL
0501: DKKLEQKEAE MKRFASADTS VLKLHYEKKL LELEQEKKAL QKEIEELRHD LASISSTSDD GAQKLKEDYL QKLNVLEKQV SELKKKQDAQ SQLLRQKQKS
0601: DEAAKRLQDE IQRIKSQKVQ LQHKIKQESE QFRLWKASRE KEVLQLKKEG RRNEYEMHKL LALNQRQKMV LQRKTEEASM ATKRLKELLE SRKASSRETL
0701: GAGNGNGPGV QALMQAIEHE LEVTVRVHEV RSQYEHQMEE RARMAREVAK LKEEADMLKQ KDFGSFPETM SPGARNSRIF ALENMLTTSS STLVSMASQL
0801: SEAEERERVF SGRGRWNQVR SLAEAKNMMN YLFNLASSSR CKLWDKELDS REKDSEIRDL KEKVVKLSGL VRQLEIQKAE LLHREKLQKL ASKKHDMDNA
0901: GRKYDFREGP RRSVILLEDM DTSESEHSST DSADDDDWVE SGKRPRKKRN SKAGGQSRVG SDISSSENLR TENSGICCSC SKSSFCKLKK CECRAAGGTC
1001: RDSCSCAPNK CTNRETIKVE ELDDFLQSAV AEGIGNLSGS DDTQKYHDLA SHGAMLLQSA LVDEPAEAND DCESKRKPLS EIGNKMARAK APKPNPRKKW
1101: RKSVIQLVSV APPSSQPENT EAPKKAENTA VEVDIPLKLP RAMRSAASNG NPFRVRNSDQ PDESAANNKE TVASASRSPV RQARTLDEKE NYGP
0001: MESTECVRVA VNIRPLITPE LLNGCTDCIT VAPKEPQVHI GSHTFTYDFV YGNGGYPCSE IYNHCVAPLV DALFKGYNAT VLAYGQTGSG KTYTMGTNYS
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTGKSNVPR PSQRKKWKKT VLQLVPVGPP
1201: ALPPTHTNTH LIPEANSVTV DSDTARMPEN SDSGESNSIK LKLPRAMRSA SSNGSNLLRE RNADQNGSES GGNSGFVQSN SGRASGSRTS DEKENHTRRV
0101: GDCTNGGVIP NVMEDIFRRV ETTKDSSELL IRVSFIEIFK EEVFDLLDSN SSALLKNDSG VQAKHTALSR APIQIRETAS GGITLAGVTE AEVKTKEEMG
0201: SFLARGSLSR ATGSTNMNSQ SSRSHAIFTI TLEQKKIAGG SCTTTEDGGE DILCAKLHLV DLAGSERAKR TGADGMRLKE GIHINKGLLA LGNVISALGD
0301: EKKRKEGGHV PYRDSKLTRL LQDSLGGNSK TVMIACVSPA DTNAEETLNT LKYANRARNI QNKAVINRDP ATAQMQRMRS QIEQLQTELL FYRGDSGAFD
0401: ELQILKHKIS LLEASNRELH NELQERRVAS EHFSKRAYDA QVEKDKLIMI IESVRNGKSL DEIESCQNED VGLVNKYVSK IQELEGELLH IKNLKKTSNH
0501: QYSDDSYDVG PRSNNVLFPS SNESSDCEDK VMDVTDELEF QEKEIEHCSL QEKLDMELKE LDKRLEEKEA EMKRFSSGGT SVLKQHYEKK VYDLEQEKRA
0601: LQREIEGLRH NLASIPSGPG DGAQKLKEEY VQKLNTLETQ VSVLKKKQDA QAQLMRQKQK SDDAAIKLQD EIHRIKSQKV QLQQKIKQES EQFRAWKASR
0701: EKEVMQLKKE GRRNEYEMHK LMALNQKQKL VLQRKTEEAS QVTKRLKELL DNRKASSRET LSGANGPGTQ ALMQAIEHEI EVTVRVHEVR SEYERQTEER
0801: ARMAKEVARL REENELLKNA KISVHGDTMS PGARNSRIFA LENMLATSSS TLVSMASQLS EAEERERVFG GRGRWNQVRT LGDAKSIMNY LFNLASTARC
0901: LARDKEADCR EKDVLIRDLK EKIVKFSSYV RYMEIQKADL VHQVKAQTSA MKKLSADENL KNEHSMKKQE TRNSTIVLED MDTSDSEASD HEREDPDLDD
1001: EWKPEHESER ESEQESVIKL NRKRNFKVGR RRSSVVMRRS YEENSETPSD DAVKSDVCCC TCSKSSSCKT MKCQCRATKG SCGPSCGCSS VKCSNRNADG
1101: KENNSISESE ALENGENSQE SDEKDKGQQQ QVLASRGAML LQNALADKPE EETNDDGGTR RRRKPLSDIG NTTGKSNVPR PSQRKKWKKT VLQLVPVGPP
1201: ALPPTHTNTH LIPEANSVTV DSDTARMPEN SDSGESNSIK LKLPRAMRSA SSNGSNLLRE RNADQNGSES GGNSGFVQSN SGRASGSRTS DEKENHTRRV
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT5G60930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.