Factsheet for VIT_17s0000g03290.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48554	Soybean	cytosol	83.16	83.16
KRH39148	Soybean	cytosol, plastid	82.64	82.64
Solyc03g119220.2.1	Tomato	nucleus	82.43	82.43
PGSC0003DMT400014403	Potato	nucleus	41.27	80.36
CDX81870	Canola	plastid	77.03	77.75
Bra031027.1-P	Field mustard	plastid	76.51	77.56
CDY21709	Canola	plastid	76.4	77.45
AT1G18370.1	Thale cress	plastid	78.38	77.41
CDY19208	Canola	cytosol	78.17	77.21
Bra025912.1-P	Field mustard	cytosol, plastid	78.38	76.94
CDY26167	Canola	cytosol, plastid	78.27	76.84
Os01t0513900-01	Rice	cytosol, plastid	69.33	69.92
EER89062	Sorghum	cytosol	67.57	68.42
GSMUA_Achr1P23180_001	Banana	cytosol, plastid	65.8	67.99
HORVU6Hr1G018600.4	Barley	plastid	66.94	67.86
Zm00001d045554_P002	Maize	cytosol, plastid	67.05	67.75
TraesCS6A01G103200.3	Wheat	plastid	66.74	67.58
TraesCS6B01G132300.1	Wheat	plastid	66.53	67.44
GSMUA_Achr9P18690_001	Banana	cytosol	64.55	67.35
TraesCS6D01G091600.1	Wheat	plastid	66.63	67.33
VIT_11s0016g00460.t01	Wine grape	cytosol	65.7	67.02
TraesCS5A01G396100.1	Wheat	plastid	65.18	65.72
TraesCS5D01G405400.1	Wheat	plastid	65.07	65.62
TraesCS5B01G400900.1	Wheat	plastid	64.86	65.41
HORVU5Hr1G096570.1	Barley	cytosol, nucleus, plastid	65.18	65.24
HORVU6Hr1G018950.4	Barley	cytosol, nucleus, plastid	65.18	65.24
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	10.39	43.86
VIT_03s0038g00700.t01	Wine grape	nucleus	40.64	40.35
VIT_04s0023g03060.t01	Wine grape	cytosol	39.81	39.36
VIT_18s0001g13580.t01	Wine grape	cytosol	38.25	37.86
VIT_18s0001g08700.t01	Wine grape	cytosol	19.02	21.79
VIT_08s0007g06820.t01	Wine grape	plastid	19.85	19.14
VIT_18s0001g02380.t01	Wine grape	plastid	21.41	18.2
VIT_03s0038g00350.t01	Wine grape	plastid	20.27	17.71
VIT_08s0007g03090.t01	Wine grape	nucleus	18.09	17.24
VIT_06s0004g03810.t01	Wine grape	plastid	18.5	16.95
VIT_08s0007g05340.t01	Wine grape	cytosol	21.83	16.8
VIT_18s0001g10090.t01	Wine grape	cytosol	18.4	16.43
VIT_07s0031g00130.t01	Wine grape	cytosol	17.98	16.03
VIT_08s0040g02590.t01	Wine grape	plastid	17.05	15.63
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	19.33	13.88
VIT_18s0001g07550.t01	Wine grape	cytosol	16.74	13.48
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	16.53	13.28
VIT_06s0009g00820.t01	Wine grape	cytosol	19.13	12.65
VIT_05s0020g00620.t01	Wine grape	cytosol	17.26	8.54
VIT_03s0063g01120.t01	Wine grape	cytosol	21.52	7.71

Protein Annotations

EntrezGene:100266348	wikigene:100266348	MapMan:20.1.3.6	Gene3D:3.40.850.10	ProteinID:CCB43238	ProteinID:CCB43238.1
ncoils:Coil	UniProt:F6GTP2	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005871	GO:GO:0005874	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	InterPro:IPR001752
InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100266348
wikigene:LOC100266348	InterPro:NACK_C	InterPro:P-loop_NTPase	PFAM:PF00225	PFAM:PF11995	PRINTS:PR00380
ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF522	SMART:SM00129	SUPFAM:SSF52540
UniParc:UPI0001984F88	ArrayExpress:VIT_17s0000g03290	EnsemblPlantsGene:VIT_17s0000g03290	EnsemblPlants:VIT_17s0000g03290.t01	unigene:Vvi.25273	RefSeq:XP_002279228
RefSeq:XP_002279228.1	RefSeq:XP_010663629.1	SEG:seg	:	:	:

Description

Kinesin-like protein [Source:UniProtKB/TrEMBL;Acc:F6GTP2]

Coordinates

chr17:-:3160638..3165627

Molecular Weight (calculated)

108508.0 Da

IEP (calculated)

7.486

GRAVY (calculated)

-0.602

Length

962 amino acids

Sequence
(BLAST)

001: MTVRTPSTPA SKTDRTPVST PGGSRVKEEK IVVTVRLRPL SKKEQSAKDQ VAWDCIDDHT IVFKPPPQER SPQLASFTFD KVFGPASLTE TVYEEGVKNV
101: ALSALMGINA TIFAYGQTSS GKTYTMRGIT EKAVNDIYKH IINSPERDFT IKISGLEIYN ENVKDLLNSE SGRNLKLLDD PEKGTVVEKL VEETANNDQH
201: LRHLISICEA QRQVGETALN DNSSRSHQII RLTIESTLRE NSGCVKSFVA SLNFVDLAGS ERASQTHADG ARLREGCHIN LSLMTLTTVI RKLSVGKRSG
301: HIPYRDSKLT RILQHSLGGN ARTAIICTLS PALTHVEQSR NTLFFATRAK EVTNNAQVNM VVSDKQLVKH LQKEVARLEA ELRTPDPSKE KDLKIQKMEM
401: EIEELRRQRD LAQSQVDELR KKIQDDPQPQ SSNPFDSPRP VKKCLSFSGA LSPKLDGKEP GHGDRIRNTM GRQTMRQSST APFTLMHEIR KLEHLQEQLG
501: EEANRALEVL QKEVACHRLG NQDAAETIAK LQAEIREMQA VRSVPKEVEV GSVVATNKSV SANLKEEITK LHSQGSTIAD LEEQLENVQK SIDKLVLSLP
601: SNNQQSNNES IVKTKSQSKK KKLIPLASSN GANRQNFIRS PCSPLSSRQT LEADVENRAP ENDDIVYSEI VLESEKETPT KSEEGGDVSS KEGTPGYQRS
701: SSVNMRKMQK MFQNAAEENV RNIRAYVTEL KERVAKLQYQ KQLLVCQVLE MEANEAAGYN LEEENTAEPE EPPVSWHVTF REQRQQIIEL WDLCFVSIIH
801: RTQFYLLFKG DPADQIYMEV ELRRLTWLQQ HLAELGNASP ARVGDEPTIS LSSSIRALKR EKEFLAKRLT TRLTLEEREL LYLKWDVPLE GKQRKMQFVN
901: KLWTDPHDAK HVQESAEVVA KLVGFCESSN MSKEMFELNF VLPADKRPWV TGWNQISNLL HL

Best Arabidopsis Sequence Match ( AT1G18370.1 )
(BLAST)

001: MTIKTPGTPV SKMDRTPAVT PGGSSRSREE KIVVTVRLRP MNKRELLAKD QVAWECVNDH TIVSKPQVQE RLHHQSSFTF DKVFGPESLT ENVYEDGVKN
101: VALSALMGIN ATIFAYGQTS SGKTYTMRGV TEKAVNDIYN HIIKTPERDF TIKISGLEIY NENVRDLLNS DSGRALKLLD DPEKGTVVEK LVEETANNDN
201: HLRHLISICE AQRQVGETAL NDTSSRSHQI IRLTIQSTHR ENSDCVRSYM ASLNFVDLAG SERASQSQAD GTRLREGCHI NLSLMTLTTV IRKLSVGKRS
301: GHIPYRDSKL TRILQHSLGG NARTAIICTL SPALAHVEQS RNTLYFANRA KEVTNNAHVN MVVSDKQLVK HLQKEVARLE AERRTPGPST EKDFKIQQME
401: MEIGELRRQR DDAQIQLEEL RQKLQGDQQQ NKGLNPFESP DPPVRKCLSY SVAVTPSSEN KTLNRNERAR KTTMRQSMIR QSSTAPFTLM HEIRKLEHLQ
501: EQLGEEATKA LEVLQKEVAC HRLGNQDAAQ TIAKLQAEIR EMRTVKPSAM LKEVGDVIAP NKSVSANLKE EITRLHSQGS TIANLEEQLE SVQKSIDKLV
601: MSLPSNISAG DETPKTKNHH HQSKKKKLLP LTPSSASNRQ NFLKSPCSPL SASRQVLDCD AENKAPQENN SSAARGATTP QGSEKETPQK GEESGDVSSR
701: EGTPGYRRSS SVNMKKMQQM FQNAAEENVR SIRAYVTELK ERVAKLQYQK QLLVCQVLEL EANDGAGYSV ENEENTIMED EEQNQVAWHI TFIEERQQII
801: ELWHVCHVSI IHRTQFYLLF KGDQADQIYM EVELRRLTWL EQHLAEVGNA TPARNCDESV VSLSSSIKAL RREREFLAKR VNSRLTPEER EELYMKWDVP
901: LEGKQRKLQF VNKLWTDPYD SRHVQESAEI VAKLVGFCES GNISKEMFEL NFAVPSDKRQ WNIGWDNISN LLHL

Arabidopsis Description

KIN7AKinesin-like protein KIN-7A [Source:UniProtKB/Swiss-Prot;Acc:Q8S905]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.