Factsheet for VIT_18s0001g10090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g078610.2.1	Tomato	cytosol	80.32	83.9
KRH15399	Soybean	cytosol	80.04	83.77
KRH05644	Soybean	cytosol	79.39	83.01
KRH61333	Soybean	cytosol	79.11	82.96
KRH52032	Soybean	cytosol	78.74	82.89
VIT_07s0031g00130.t01	Wine grape	cytosol	81.15	81.0
AT5G47820.1	Thale cress	cytosol	76.42	79.52
CDX85308	Canola	cytosol	75.86	79.4
Bra037528.1-P	Field mustard	cytosol	75.49	79.01
CDY19973	Canola	cytosol	75.77	78.84
CDY35769	Canola	cytosol	75.58	78.72
CDX86343	Canola	cytosol	75.12	78.62
CDY63235	Canola	cytosol	75.77	78.54
Bra036194.1-P	Field mustard	cytosol	76.04	78.45
CDY45912	Canola	cytosol	74.65	78.13
Bra020729.1-P	Field mustard	cytosol	73.35	77.53
GSMUA_Achr4P12870_001	Banana	cytosol	37.14	75.33
OQU89071	Sorghum	cytosol	70.38	73.45
GSMUA_Achr1P09810_001	Banana	cytosol	70.75	73.41
Zm00001d019670_P015	Maize	cytosol	69.92	72.97
Os09t0114500-01	Rice	cytosol	70.1	72.95
TraesCS5B01G159100.1	Wheat	cytosol	69.64	72.67
TraesCS5D01G167500.1	Wheat	cytosol	69.64	72.67
TraesCS5A01G161600.1	Wheat	cytosol	69.64	72.18
HORVU5Hr1G050510.12	Barley	cytosol	69.08	71.4
GSMUA_Achr9P22550_001	Banana	cytosol	71.87	68.37
GSMUA_Achr4P12880_001	Banana	cytosol	34.63	64.87
VIT_18s0001g07550.t01	Wine grape	cytosol	46.43	41.88
VIT_16s0050g02080.t01	Wine grape	cytosol, mitochondrion	6.22	29.39
VIT_06s0004g03810.t01	Wine grape	plastid	20.24	20.76
VIT_08s0007g03090.t01	Wine grape	nucleus	19.22	20.52
VIT_18s0001g08700.t01	Wine grape	cytosol	15.97	20.48
VIT_08s0007g06820.t01	Wine grape	plastid	18.85	20.34
VIT_08s0040g02590.t01	Wine grape	plastid	19.13	19.64
VIT_04s0023g03060.t01	Wine grape	cytosol	17.18	19.01
VIT_11s0016g00460.t01	Wine grape	cytosol	16.62	18.98
VIT_17s0000g03290.t01	Wine grape	cytosol, plastid	16.43	18.4
VIT_03s0038g00700.t01	Wine grape	nucleus	16.25	18.06
VIT_18s0001g13580.t01	Wine grape	cytosol	16.16	17.9
VIT_18s0001g02380.t01	Wine grape	plastid	18.76	17.84
VIT_03s0038g00350.t01	Wine grape	plastid	17.92	17.53
VIT_08s0007g05340.t01	Wine grape	cytosol	19.22	16.56
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	20.24	16.27
VIT_06s0009g00820.t01	Wine grape	cytosol	20.61	15.26
VIT_19s0090g01600.t01	Wine grape	cytosol, plastid	16.81	15.12
VIT_05s0020g00620.t01	Wine grape	cytosol	18.29	10.13
VIT_03s0063g01120.t01	Wine grape	cytosol	23.12	9.27

Protein Annotations

EntrezGene:100255840	wikigene:100255840	MapMan:20.1.3.3	Gene3D:3.40.850.10	EMBL:AM448784	ProteinID:CAN61020
ProteinID:CAN61020.1	ProteinID:CBI19484	ProteinID:CBI19484.3	ncoils:Coil	UniProt:E0CPS1	EMBL:FN595227
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005856	GO:GO:0005871	GO:GO:0006810	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0008574	GO:GO:0009832	GO:GO:0009987	GO:GO:0010215	GO:GO:0016043	GO:GO:0016787
GO:GO:0030705	GO:GO:0055028	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS
InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100255840	wikigene:LOC100255840	InterPro:P-loop_NTPase	PFAM:PF00225
PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF463	SMART:SM00129
SUPFAM:SSF52540	UniParc:UPI0001BE1313	ArrayExpress:VIT_18s0001g10090	EnsemblPlantsGene:VIT_18s0001g10090	EnsemblPlants:VIT_18s0001g10090.t01	unigene:Vvi.18275
RefSeq:XP_002282968	RefSeq:XP_002282968.2	RefSeq:XP_010664557.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:-:8428536..8444610

Molecular Weight (calculated)

121123.0 Da

IEP (calculated)

9.185

GRAVY (calculated)

-0.669

Length

1077 amino acids

Sequence
(BLAST)

0001: MEPGEDCCVK VAVHIRPLIG DERLQGCKDC VTVIPGKPQV QIGTHSFTFD HVYGSTGSSS SAMFEECVAP LVDGLFQGYN ATVLAYGQTG SGKTYTMGTG
0101: FKDSSQMGLI PQVMNALFNK IETLKHQTEF QLHVSFIEIL KEEVRDLLDP SSVNKSETAN GHTGKVPVPG KPPIQIRETS NGVITLAGST EIGVRTLKEM
0201: AACLEQGSLS RATGSTNMNN QSSRSHAIFT ITLEQMNKLN PAFPSDSGLS ESMSEEYLCA KLHLVDLAGS ERAKRTGSDG LRFKEGVHIN KGLLALGNVI
0301: SALGDEKKRK EGVHVPYRDS KLTRLLQDSL GGNSRTVMIA CISPADINAE ETLNTLKYAN RARNIQNKPV VNRDPISNEM LKMRQQLEYL QAELCARGGG
0401: ASSDETQVLK ERIAWLEATN EDLCRELHQY RSRCHVTEQC ETDAQDVHTC SVKSDGLKRG LSSVDSSDYQ MGETIMAGDS REMDEEAAKE WEHTLLQNTM
0501: DKELNELNKR LEQKETEMKL FGGLDTVALK QHFGKKIVEL EEEKRTVQQE RDRLLAEVEN RAANSDGQAQ KLQDIHAQKL KTLEAQILDL KKKQESQVQL
0601: LKEKQKSDEA AKRLQDEIQF IKAQKVQLQQ KIKQEAEQFR QWKASREKEL LQLRKEGRRN EYERHKLQTL NQRQKMVLQR KTEEAAMATK RLKELLEARK
0701: SSARENSGIT NGNGTNGQSN EKSLQRWLDH ELEVMVNVHE VRFEYEKQSQ VRAALAEELA VLKQVDEFAL KGLSPPRGKN GLSRVSSMSP NARMARISSL
0801: ENMLSISSNS LVAMASQLSE AEERERAFTS RGRWNQLRSM GDAKSLLQYM FNSVADTRCQ LWEKELEIKE MKDQLKELVG LLRQSELRRK EVEKELKLRE
0901: QAVAIALATQ ASAGNVQEKS QSSLKHFADE MSGPLSPMSV PAQKQLKYTA GIANGLVRER VAFIDQTRKM VPVGPLSMKK LAVVGQAGKL WRWKRSHHQW
1001: LLQFKWKWQK PWRLSEWIRH SDETIMRARP RTQVLTDKLG SYGNGKGVVN SGCYSSNGSG RNHRDSRNGL GTVMKQS

Best Arabidopsis Sequence Match ( AT5G47820.2 )
(BLAST)

0001: MESTPPPDDC SVKVAVHIRP LIGDERIQGC QDCVTVVTGK PQVQIGSHSF TFDHVYGSSG SPSTEMYEEC AAPLVDGLFQ GYNATVLAYG QTGSGKTYTM
0101: GTGCGDSSQT GIIPQVMNAL FTKIETLKQQ IEFQIHVSFI EIHKEEVQDL LDPCTVNKSD TNNTGHVGKV AHVPGKPPIQ IRETSNGVIT LAGSTEVSVS
0201: TLKEMAACLD QGSVSRATGS TNMNNQSSRS HAIFTITVEQ MRKINTDSPE NGAYNGSLKE EYLCAKLHLV DLAGSERAKR TGSDGLRFKE GVHINKGLLA
0301: LGNVISALGD EKKRKDGAHV PYRDSKLTRL LQDSLGGNSR TVMIACISPA DINAEETLNT LKYANRARNI RNKPVVNRDP VSSEMLKMRQ QVEYLQAELS
0401: LRTGGSSCAE VQALKERIVW LETANEELCR ELHEYRSRCP GVEHSEKDFK DIRADDIVGS VRPDGLKRSL HSIESSNYPM VEATTGDSRE IDEEAKEWEH
0501: KLLQNSMDKE LYELNRRLEE KESEMKLFDG YDPAALKQHF GKKIAEVEDE KRSVQEERNR LLAEIENLAS DGQAQKLQDV HAQNLKALEA QILDLKKKQE
0601: SQVQLLKQKQ KSDDAARRLQ DEIQSIKAQK VQLQHRMKQE AEQFRQWKAS REKELLQLRK EGRKSEYERH KLQALNQRQK MVLQRKTEEA AMATKRLKEL
0701: LEARKSSPRE HSAGTNGFGT NGQTNEKSLQ RWLDHELEVM VNVHEVRHEY EKQSHVRAAL AEELAVLRQV DEFAVKGLSP PRGKNGFARA SSLSPNARMA
0801: RISSLENMLV ISSNSLVAMA SQLSEAEERE RAFTNRGRWN QLRSMGEAKN LLQYMFNSLA ETRCQLWEKD VEIKEMKDQF KEIVGLLRQS ELRRKEAEKE
0901: LKLREQAIAT SLGTPPSSVK HVAEDLSTPS PMTVPAQKQL KFTPGIANGK VRGPAAFLDT NKKMVPMGQV SMRKLSAVGK QGGRLWRWKR SHHQWIVQFK
1001: WKWQKPWRLS EWIRTSDETL LKSKPRLKAL PNKIM

Arabidopsis Description

KIN4AKinesin-like protein KIN-4A [Source:UniProtKB/Swiss-Prot;Acc:Q8GS71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.