Factsheet for Bra037528.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86343	Canola	cytosol	99.22	99.22
Bra036194.1-P	Field mustard	cytosol	94.95	93.58
AT5G47820.1	Thale cress	cytosol	92.81	92.27
Bra020729.1-P	Field mustard	cytosol	90.57	91.46
KRH15399	Soybean	cytosol	77.55	77.55
KRH61333	Soybean	cytosol	76.97	77.12
KRH52032	Soybean	cytosol	76.58	77.03
KRH05644	Soybean	cytosol	77.07	76.99
Solyc04g078610.2.1	Tomato	cytosol	76.97	76.82
VIT_18s0001g10090.t01	Wine grape	cytosol	79.01	75.49
Os09t0114500-01	Rice	cytosol	68.8	68.41
GSMUA_Achr4P12870_001	Banana	cytosol	35.28	68.36
OQU89071	Sorghum	cytosol	68.32	68.12
Zm00001d019670_P015	Maize	cytosol	68.22	68.02
TraesCS5D01G167500.1	Wheat	cytosol	67.25	67.05
TraesCS5B01G159100.1	Wheat	cytosol	67.15	66.96
GSMUA_Achr1P09810_001	Banana	cytosol	67.15	66.57
TraesCS5A01G161600.1	Wheat	cytosol	67.06	66.41
HORVU5Hr1G050510.12	Barley	cytosol	66.86	66.03
GSMUA_Achr9P22550_001	Banana	cytosol	68.61	62.37
Bra036060.1-P	Field mustard	cytosol	61.32	61.56
GSMUA_Achr4P12880_001	Banana	cytosol	34.11	61.04
Bra011415.1-P	Field mustard	nucleus	26.24	40.42
Bra012995.1-P	Field mustard	nucleus	49.17	39.69
Bra029345.1-P	Field mustard	cytosol	48.4	39.09
Bra021972.1-P	Field mustard	cytosol	7.19	38.54
Bra009591.1-P	Field mustard	cytosol	11.95	21.77
Bra033586.1-P	Field mustard	nucleus	15.55	20.97
Bra034785.1-P	Field mustard	cytosol	19.24	20.41
Bra011885.1-P	Field mustard	nucleus	15.55	20.18
Bra028723.1-P	Field mustard	plastid	19.05	20.1
Bra017256.1-P	Field mustard	cytosol	19.63	20.02
Bra027851.1-P	Field mustard	cytosol	15.94	19.85
Bra005294.1-P	Field mustard	cytosol	19.34	19.72
Bra035686.1-P	Field mustard	plastid	19.92	19.58
Bra017946.1-P	Field mustard	plastid	16.91	19.48
Bra019444.1-P	Field mustard	cytosol, plastid	17.2	19.43
Bra033832.1-P	Field mustard	cytosol	19.83	19.39
Bra017189.1-P	Field mustard	cytosol, plastid	18.85	18.64
Bra038694.1-P	Field mustard	cytosol	13.41	18.57
Bra030304.1-P	Field mustard	nucleus	15.16	18.53
Bra010714.1-P	Field mustard	plastid	18.85	18.46
Bra031027.1-P	Field mustard	plastid	16.81	18.23
Bra031184.1-P	Field mustard	plastid	18.56	17.82
Bra025912.1-P	Field mustard	cytosol, plastid	16.91	17.76
Bra031179.1-P	Field mustard	nucleus	14.38	17.66
Bra036834.1-P	Field mustard	cytosol	16.52	16.9
Bra034988.1-P	Field mustard	cytosol	20.31	16.47
Bra014969.1-P	Field mustard	cytosol, plastid	21.28	16.44
Bra033597.1-P	Field mustard	cytosol	18.85	15.91
Bra001287.1-P	Field mustard	cytosol	18.76	15.86
Bra035302.1-P	Field mustard	cytosol	16.33	15.85
Bra028334.1-P	Field mustard	plastid	19.44	15.46
Bra001776.1-P	Field mustard	plastid	17.88	14.91
Bra012866.1-P	Field mustard	cytosol	16.04	14.69
Bra013771.1-P	Field mustard	cytosol	16.72	14.54
Bra041153.1-P	Field mustard	cytosol	2.33	11.32
Bra022212.1-P	Field mustard	cytosol	19.44	10.79
Bra022381.1-P	Field mustard	cytosol	24.98	9.09

Protein Annotations

MapMan:20.1.3.3	Gene3D:3.40.850.10	EnsemblPlantsGene:Bra037528	EnsemblPlants:Bra037528.1	EnsemblPlants:Bra037528.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	UniProt:M4F8W6	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF463	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000253F8A7
SEG:seg	:	:	:	:	:

Description

AT5G47820 (E=0.0) FRA1 | FRA1 (FRAGILE FIBER 1); microtubule motor

Coordinates

chrA06:+:21050830..21056303

Molecular Weight (calculated)

115945.0 Da

IEP (calculated)

9.004

GRAVY (calculated)

-0.728

Length

1029 amino acids

Sequence
(BLAST)

0001: MESDDCSVKV AVHIRPLIGD ERLQGCKDCV TVVSGKPQVQ IGSHSFTFDH VYGSTCSPST EMYQECAAPL VDGLFQGYNA TVLAYGQTGS GKTYTMGTGC
0101: GDNSTQTGIV PQVMNALFTK IETLKDHIEF QIHVSFIEIH KEEVQDLLDP STINKSDTKV AHVPGKPPIQ IRESSNGVIT LAGSTEVSVS TLKEMAACLD
0201: QGSVSRATGS TNMNNQSSRS HAIFTISVEQ MRKVNNNTDS SENGSLKEEY LCAKLHLVDL AGSERAKRTG SDGMRFKEGV HINKGLLALG NVISALGDEK
0301: KRKDGAHVPY RDSKLTRLLQ DSLGGNSRTV MIACISPADI NAEETLNTLK YANRARNIRN KPVVNRDPVS SEMLKMRQQL EYLQAELSLR NGGSSCAELQ
0401: VLKERIASLE TANEDLCREL HEYRSRCGGV EEPSEKDFKD IQAVDEIVGS GRPDGLKRSL HSIESSNYPM VEATTGDSRE VDEEAKEWEH KLLQNSMDKE
0501: LHELNRRLEE KESEMKLFDD PAALKQHFGK KIAEVEDEKK SVQEERSRLL AEIENLASSD GQAQKLEDVH AQNLKSLEAQ IQDLKKKQES QVQLLKQKQK
0601: SDDAAKRLQD EIQSIKAQKV QLQHRMKQEA EQFRQWKASR EKELLQLRKE GRKSEYERHK LQALNQRQKM VLQRKTEEAA MATKRLKELL EARKSSPREH
0701: SGGTNGFATN GQTNEKSLQR WLDHELEVMV NVHEVRHEYE KQSHVRAALA EELSVLRQVD EFAVKGLSPP RGKNGFARAS SLSPNARTAR ISSLENMLGI
0801: SSNSLVAMAS QLSEAEERER AFTSRGRWNQ LRSMGEAKNL LQYMFNSLAE TRCQLWEKDV EIKEMKDQFK EIVGLLRQSE LRRKEAEKEV KLREQAHATS
0901: LASSPLGTPP SSVKHLVEDM TTPSPMTVPA QKQLKFTPGI ANGKVKDSAA FINTNKKMVP MGQVSMRKLS AIGQQSGKLW RWKRSHHQWI VQFKWKWQKP
1001: WRLSEWIRHS DETLLKAKSR HKALPKKIM

Best Arabidopsis Sequence Match ( AT5G47820.2 )
(BLAST)

0001: MESTPPPDDC SVKVAVHIRP LIGDERIQGC QDCVTVVTGK PQVQIGSHSF TFDHVYGSSG SPSTEMYEEC AAPLVDGLFQ GYNATVLAYG QTGSGKTYTM
0101: GTGCGDSSQT GIIPQVMNAL FTKIETLKQQ IEFQIHVSFI EIHKEEVQDL LDPCTVNKSD TNNTGHVGKV AHVPGKPPIQ IRETSNGVIT LAGSTEVSVS
0201: TLKEMAACLD QGSVSRATGS TNMNNQSSRS HAIFTITVEQ MRKINTDSPE NGAYNGSLKE EYLCAKLHLV DLAGSERAKR TGSDGLRFKE GVHINKGLLA
0301: LGNVISALGD EKKRKDGAHV PYRDSKLTRL LQDSLGGNSR TVMIACISPA DINAEETLNT LKYANRARNI RNKPVVNRDP VSSEMLKMRQ QVEYLQAELS
0401: LRTGGSSCAE VQALKERIVW LETANEELCR ELHEYRSRCP GVEHSEKDFK DIRADDIVGS VRPDGLKRSL HSIESSNYPM VEATTGDSRE IDEEAKEWEH
0501: KLLQNSMDKE LYELNRRLEE KESEMKLFDG YDPAALKQHF GKKIAEVEDE KRSVQEERNR LLAEIENLAS DGQAQKLQDV HAQNLKALEA QILDLKKKQE
0601: SQVQLLKQKQ KSDDAARRLQ DEIQSIKAQK VQLQHRMKQE AEQFRQWKAS REKELLQLRK EGRKSEYERH KLQALNQRQK MVLQRKTEEA AMATKRLKEL
0701: LEARKSSPRE HSAGTNGFGT NGQTNEKSLQ RWLDHELEVM VNVHEVRHEY EKQSHVRAAL AEELAVLRQV DEFAVKGLSP PRGKNGFARA SSLSPNARMA
0801: RISSLENMLV ISSNSLVAMA SQLSEAEERE RAFTNRGRWN QLRSMGEAKN LLQYMFNSLA ETRCQLWEKD VEIKEMKDQF KEIVGLLRQS ELRRKEAEKE
0901: LKLREQAIAT SLGTPPSSVK HVAEDLSTPS PMTVPAQKQL KFTPGIANGK VRGPAAFLDT NKKMVPMGQV SMRKLSAVGK QGGRLWRWKR SHHQWIVQFK
1001: WKWQKPWRLS EWIRTSDETL LKSKPRLKAL PNKIM

Arabidopsis Description

KIN4AKinesin-like protein KIN-4A [Source:UniProtKB/Swiss-Prot;Acc:Q8GS71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.