Factsheet for GSMUA_Achr4P12880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52032	Soybean	cytosol	63.48	35.68
OQU89071	Sorghum	cytosol	63.83	35.56
Solyc04g078610.2.1	Tomato	cytosol	63.65	35.5
KRH61333	Soybean	cytosol	63.3	35.44
Zm00001d019670_P015	Maize	cytosol	63.48	35.37
KRH15399	Soybean	cytosol	62.96	35.18
TraesCS5D01G167500.1	Wheat	cytosol	62.78	34.98
TraesCS5B01G159100.1	Wheat	cytosol	62.78	34.98
GSMUA_Achr9P22550_001	Banana	cytosol	68.52	34.81
TraesCS5A01G161600.1	Wheat	cytosol	62.78	34.74
KRH05644	Soybean	cytosol	62.09	34.66
HORVU5Hr1G050510.12	Barley	cytosol	62.78	34.64
VIT_18s0001g10090.t01	Wine grape	cytosol	64.87	34.63
Os09t0114500-01	Rice	cytosol	61.74	34.3
CDY19973	Canola	cytosol	61.74	34.3
AT5G47820.1	Thale cress	cytosol	61.57	34.2
GSMUA_Achr1P09810_001	Banana	cytosol	61.74	34.2
CDX86343	Canola	cytosol	61.04	34.11
Bra037528.1-P	Field mustard	cytosol	61.04	34.11
CDY63235	Canola	cytosol	61.57	34.07
CDX85308	Canola	cytosol	60.87	34.01
Bra036194.1-P	Field mustard	cytosol	61.74	34.0
GSMUA_Achr9P28230_001	Banana	cytosol	49.22	33.65
CDY35769	Canola	cytosol	60.0	33.37
VIT_07s0031g00130.t01	Wine grape	cytosol	62.43	33.27
CDY45912	Canola	cytosol	59.3	33.14
KRH04551	Soybean	cytosol	58.61	32.72
KRH57809	Soybean	cytosol	57.91	32.3
GSMUA_Achr7P17300_001	Banana	cytosol	10.43	31.91
Bra020729.1-P	Field mustard	cytosol	56.35	31.8
CDY30599	Canola	cytosol	56.35	31.58
Bra036060.1-P	Field mustard	cytosol	56.17	31.51
CDY17754	Canola	cytosol	56.35	31.49
AT3G50240.1	Thale cress	plastid	56.52	30.92
GSMUA_AchrUn_...	Banana	cytosol	15.83	29.17
GSMUA_Achr9P15980_001	Banana	cytosol	10.78	24.22
GSMUA_Achr5P23970_001	Banana	cytosol	50.78	22.53
GSMUA_Achr7P27470_001	Banana	cytosol	23.83	19.8
GSMUA_Achr11P...	Banana	plastid	12.35	18.93
GSMUA_Achr10P...	Banana	cytosol	27.13	15.46
GSMUA_Achr9P04070_001	Banana	cytosol	28.17	15.41
GSMUA_Achr7P15420_001	Banana	cytosol	27.48	14.98
GSMUA_Achr6P33290_001	Banana	cytosol	26.61	14.81
GSMUA_Achr1P07780_001	Banana	cytosol	21.22	14.75
GSMUA_Achr3P07790_001	Banana	cytosol, plastid	26.09	14.38
GSMUA_Achr2P19060_001	Banana	cytosol	25.57	14.33
GSMUA_Achr2P03390_001	Banana	cytosol	21.22	13.79
GSMUA_Achr7P18190_001	Banana	cytosol	26.96	13.75
GSMUA_Achr1P23180_001	Banana	cytosol, plastid	21.91	13.53
GSMUA_Achr2P11920_001	Banana	nucleus	21.57	13.29
GSMUA_Achr9P18690_001	Banana	cytosol	21.04	13.12
GSMUA_Achr9P01650_001	Banana	cytosol	25.39	13.0
GSMUA_Achr7P05800_001	Banana	cytosol	22.78	12.67
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	25.39	12.53
GSMUA_Achr6P23180_001	Banana	cytosol	26.96	12.47
GSMUA_Achr4P01980_001	Banana	cytosol	26.09	12.33
GSMUA_Achr4P24730_001	Banana	cytosol	21.91	11.86
GSMUA_Achr9P26550_001	Banana	cytosol, mitochondrion	27.13	11.45
GSMUA_Achr10P...	Banana	cytosol, plastid	22.43	11.44
GSMUA_Achr8P11730_001	Banana	plastid	24.7	10.76
GSMUA_Achr11P...	Banana	endoplasmic reticulum	14.09	9.47
GSMUA_Achr9P15970_001	Banana	cytosol	16.35	8.54
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	13.22	7.97
GSMUA_AchrUn_...	Banana	cytosol	6.78	6.55
GSMUA_Achr10P...	Banana	cytosol	28.17	5.96
GSMUA_Achr4P12870_001	Banana	cytosol	3.13	3.39

Protein Annotations

MapMan:20.1.3.3	Gene3D:3.40.850.10	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005874	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G12880_001	EnsemblPlants:GSMUA_Achr4P12880_001	EnsemblPlants:GSMUA_Achr4T12880_001
InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf
UniProt:M0SNF3	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067
PANTHER:PTHR24115	PANTHER:PTHR24115:SF463	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000294DD16	SEG:seg

Description

Putative Chromosome-associated kinesin KIF4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12880_001]

Coordinates

chr4:-:9561294..9571456

Molecular Weight (calculated)

64228.5 Da

IEP (calculated)

6.883

GRAVY (calculated)

-0.289

Length

575 amino acids

Sequence
(BLAST)

001: MTMENGEDCC VKVAVHIRPL IGDERLQGCK DCVTVVPRKP QPSTNFLDFI NHKYACNVFD VQVQIGTHSF TFDHVYGSTA SPSSLMFDEC VAPLVDGLFQ
101: GYNATVLAYG QTGSGKTYTM GTGCKDDSQT GLIPQVMNAL FSKIETLRNQ AEFQLRVSFI EYIISYRVFI GLTATCEYFC RHCSWLRHFR DLLDSSSVSK
201: LDVASGQVGK MTVPGKPPVQ IREASNGVIT LAGSTEVSVS IQKEMAACLE QGSLNRATGS TNMNNQSSRS HAIFTIMLEQ MRKHGPIVST EGVQIEDVNE
301: DYLCAKFHLV DLAGSERAKR TGSDGLRFKE GVHINKGLLA LGNVISALGD EKKRKEGAHV PYRDSKLTRL LQDSLGGNSR TVMIGKINYC PQCCVHYFKL
401: SCRLVTWGSQ INVTLFDTSL SCISPADINA EETLNTLKYA NRARNIQNKP IVNRNPISEE IQRMRQHIEY LQAQLACYRG EGASDEIQAL KEKVSWLEAT
501: NEDLCRELYE YRSQSSQNEH FDIDSQKSGM FFLKAEGLKR SLHTTEGFDY QMTETLRGIS LVTLDQSNNF LFFFS

Best Arabidopsis Sequence Match ( AT5G47820.2 )
(BLAST)

0001: MESTPPPDDC SVKVAVHIRP LIGDERIQGC QDCVTVVTGK PQVQIGSHSF TFDHVYGSSG SPSTEMYEEC AAPLVDGLFQ GYNATVLAYG QTGSGKTYTM
0101: GTGCGDSSQT GIIPQVMNAL FTKIETLKQQ IEFQIHVSFI EIHKEEVQDL LDPCTVNKSD TNNTGHVGKV AHVPGKPPIQ IRETSNGVIT LAGSTEVSVS
0201: TLKEMAACLD QGSVSRATGS TNMNNQSSRS HAIFTITVEQ MRKINTDSPE NGAYNGSLKE EYLCAKLHLV DLAGSERAKR TGSDGLRFKE GVHINKGLLA
0301: LGNVISALGD EKKRKDGAHV PYRDSKLTRL LQDSLGGNSR TVMIACISPA DINAEETLNT LKYANRARNI RNKPVVNRDP VSSEMLKMRQ QVEYLQAELS
0401: LRTGGSSCAE VQALKERIVW LETANEELCR ELHEYRSRCP GVEHSEKDFK DIRADDIVGS VRPDGLKRSL HSIESSNYPM VEATTGDSRE IDEEAKEWEH
0501: KLLQNSMDKE LYELNRRLEE KESEMKLFDG YDPAALKQHF GKKIAEVEDE KRSVQEERNR LLAEIENLAS DGQAQKLQDV HAQNLKALEA QILDLKKKQE
0601: SQVQLLKQKQ KSDDAARRLQ DEIQSIKAQK VQLQHRMKQE AEQFRQWKAS REKELLQLRK EGRKSEYERH KLQALNQRQK MVLQRKTEEA AMATKRLKEL
0701: LEARKSSPRE HSAGTNGFGT NGQTNEKSLQ RWLDHELEVM VNVHEVRHEY EKQSHVRAAL AEELAVLRQV DEFAVKGLSP PRGKNGFARA SSLSPNARMA
0801: RISSLENMLV ISSNSLVAMA SQLSEAEERE RAFTNRGRWN QLRSMGEAKN LLQYMFNSLA ETRCQLWEKD VEIKEMKDQF KEIVGLLRQS ELRRKEAEKE
0901: LKLREQAIAT SLGTPPSSVK HVAEDLSTPS PMTVPAQKQL KFTPGIANGK VRGPAAFLDT NKKMVPMGQV SMRKLSAVGK QGGRLWRWKR SHHQWIVQFK
1001: WKWQKPWRLS EWIRTSDETL LKSKPRLKAL PNKIM

Arabidopsis Description

KIN4AKinesin-like protein KIN-4A [Source:UniProtKB/Swiss-Prot;Acc:Q8GS71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.