Factsheet for Bra020729.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45912	Canola	cytosol	96.57	95.63
CDY35769	Canola	cytosol	95.98	94.58
Bra037528.1-P	Field mustard	cytosol	91.46	90.57
AT5G47820.1	Thale cress	cytosol	90.58	89.18
Bra036194.1-P	Field mustard	cytosol	91.27	89.08
KRH15399	Soybean	cytosol	76.15	75.41
KRH61333	Soybean	cytosol	75.76	75.17
KRH05644	Soybean	cytosol	75.56	74.76
KRH52032	Soybean	cytosol	74.98	74.68
Solyc04g078610.2.1	Tomato	cytosol	75.07	74.2
VIT_18s0001g10090.t01	Wine grape	cytosol	77.53	73.35
GSMUA_Achr4P12870_001	Banana	cytosol	35.23	67.61
Os09t0114500-01	Rice	cytosol	68.4	67.34
OQU89071	Sorghum	cytosol	67.62	66.76
Zm00001d019670_P015	Maize	cytosol	67.52	66.67
TraesCS5D01G167500.1	Wheat	cytosol	66.24	65.41
TraesCS5B01G159100.1	Wheat	cytosol	66.24	65.41
GSMUA_Achr1P09810_001	Banana	cytosol	66.14	64.93
TraesCS5A01G161600.1	Wheat	cytosol	66.05	64.77
HORVU5Hr1G050510.12	Barley	cytosol	65.85	64.4
GSMUA_Achr9P22550_001	Banana	cytosol	67.32	60.6
Bra036060.1-P	Field mustard	cytosol	60.16	59.8
GSMUA_Achr4P12880_001	Banana	cytosol	31.8	56.35
Bra011415.1-P	Field mustard	nucleus	25.42	38.77
Bra012995.1-P	Field mustard	nucleus	48.18	38.51
Bra029345.1-P	Field mustard	cytosol	47.2	37.76
Bra021972.1-P	Field mustard	cytosol	6.87	36.46
Bra009591.1-P	Field mustard	cytosol	11.38	20.53
Bra033586.1-P	Field mustard	nucleus	15.21	20.31
Bra011885.1-P	Field mustard	nucleus	15.51	19.92
Bra034785.1-P	Field mustard	cytosol	18.84	19.79
Bra005294.1-P	Field mustard	cytosol	19.23	19.43
Bra017256.1-P	Field mustard	cytosol	19.23	19.43
Bra028723.1-P	Field mustard	plastid	18.55	19.38
Bra017946.1-P	Field mustard	plastid	16.88	19.26
Bra027851.1-P	Field mustard	cytosol	15.31	18.89
Bra033832.1-P	Field mustard	cytosol	19.43	18.82
Bra019444.1-P	Field mustard	cytosol, plastid	16.78	18.77
Bra035686.1-P	Field mustard	plastid	19.23	18.72
Bra038694.1-P	Field mustard	cytosol	13.54	18.57
Bra030304.1-P	Field mustard	nucleus	15.01	18.17
Bra017189.1-P	Field mustard	cytosol, plastid	18.25	17.87
Bra031027.1-P	Field mustard	plastid	16.58	17.81
Bra010714.1-P	Field mustard	plastid	18.35	17.79
Bra031184.1-P	Field mustard	plastid	18.16	17.26
Bra025912.1-P	Field mustard	cytosol, plastid	16.58	17.24
Bra031179.1-P	Field mustard	nucleus	14.03	17.06
Bra036834.1-P	Field mustard	cytosol	16.09	16.3
Bra034988.1-P	Field mustard	cytosol	19.92	16.0
Bra014969.1-P	Field mustard	cytosol, plastid	20.22	15.47
Bra033597.1-P	Field mustard	cytosol	18.16	15.18
Bra001287.1-P	Field mustard	cytosol	18.06	15.12
Bra035302.1-P	Field mustard	cytosol	15.7	15.09
Bra028334.1-P	Field mustard	plastid	18.45	14.53
Bra001776.1-P	Field mustard	plastid	17.27	14.26
Bra012866.1-P	Field mustard	cytosol	15.6	14.16
Bra013771.1-P	Field mustard	cytosol	16.19	13.95
Bra041153.1-P	Field mustard	cytosol	2.26	10.85
Bra022212.1-P	Field mustard	cytosol	19.14	10.52
Bra022381.1-P	Field mustard	cytosol	24.14	8.7

Protein Annotations

MapMan:20.1.3.3	Gene3D:3.40.850.10	EnsemblPlantsGene:Bra020729	EnsemblPlants:Bra020729.1	EnsemblPlants:Bra020729.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	UniProt:M4DW35	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF463	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002546141
SEG:seg	:	:	:	:	:

Description

AT5G47820 (E=4e-270) FRA1 | FRA1 (FRAGILE FIBER 1); microtubule motor

Coordinates

chrA02:+:23475382..23481177

Molecular Weight (calculated)

114665.0 Da

IEP (calculated)

9.440

GRAVY (calculated)

-0.761

Length

1019 amino acids

Sequence
(BLAST)

0001: MESTTPPNDC SVKVAVHIRP LIGDERLQGC KDCVTVVPGK PQVQIGSHSF TFDHVYGSSG SPSTDMYEQC AAPLVDGLFQ GYNATVLAYG QTGSGKTYTM
0101: GTGSGDSSQT GGIVPQIHKE EVQDLLDPTS TGKVANVPGK PPIQIRETSN GVITLAGSTE VSVSTLKEMA ACLDQGSISR ATGSTNMNNQ SSRSHAIFTI
0201: TVEQMRKINT DSTDNGSLKE EYLCAKLHLV DLAGSERAKR TGSDGMRFKE GVHINKGLLA LGNVISALGD EKKRKDGAHV PYRDSKLTRL LQDSLGGNSR
0301: TVMIACISPA DINAEETLNT LKYANRARNI RNKPVVNRDP VSSEMLKMRQ QLEYLQAELS LRSGGSSCAE LQVLKERIAC LETANEDLCR QLHEYRSRCG
0401: GGVEPSEKDF KDIQADEIVG SVRPDGLKRS LQSIESSNYP MVEATIGESR EVDEEAKEWE HKLLQNSMDK ELHELNRRLE EKESEMKLFD GYDTAALKQY
0501: FGKKIAEVED EKRSVQEERN RLLAEIENLA SSDGQAHKLQ DVHAQNLKSL EAQIQDLKKK QENQVQLLKQ KQKSDDAAKR LQDEIHSIKA QKVQLQHRMK
0601: QEAEQFRQWK ASREKELLQL RKEGRKSEYE RHKLQALNQR QKMVSEKSRK KEDSEVCNSQ VLQRKTEEAA MATKRLKELL EARKSSPRDH SGGTNGFGTN
0701: GQTNEKSLQR WLDHELEVMV NVHEVRHEYE KQSHVRAALA EELSVLRQVD EFAAKGLSPP RGKNGFARAS SLSPNARMAR ISSLENMLGI SSNSLVAMAS
0801: QLSEAEERER AFTNRGRWNQ LRSMGEAKNL LQYMFNSLAD TRCQLWEKDV EIKEMKDQFK EIVGLMRQSE LRRKEAEKEL KLRQQALATS LASSPLGTPP
0901: SSVKHLAEDM ITPSPMTMPT QKQLKFTPGI ANGKVRDSAA FINTNKKMVP MGQVSMRKLA AVGQQSGRLW RWKRSHHQWI VQFKWKWQKP WRLSEWIRQS
1001: DETLVRTKPR HKALPNKIM

Best Arabidopsis Sequence Match ( AT5G47820.2 )
(BLAST)

0001: MESTPPPDDC SVKVAVHIRP LIGDERIQGC QDCVTVVTGK PQVQIGSHSF TFDHVYGSSG SPSTEMYEEC AAPLVDGLFQ GYNATVLAYG QTGSGKTYTM
0101: GTGCGDSSQT GIIPQVMNAL FTKIETLKQQ IEFQIHVSFI EIHKEEVQDL LDPCTVNKSD TNNTGHVGKV AHVPGKPPIQ IRETSNGVIT LAGSTEVSVS
0201: TLKEMAACLD QGSVSRATGS TNMNNQSSRS HAIFTITVEQ MRKINTDSPE NGAYNGSLKE EYLCAKLHLV DLAGSERAKR TGSDGLRFKE GVHINKGLLA
0301: LGNVISALGD EKKRKDGAHV PYRDSKLTRL LQDSLGGNSR TVMIACISPA DINAEETLNT LKYANRARNI RNKPVVNRDP VSSEMLKMRQ QVEYLQAELS
0401: LRTGGSSCAE VQALKERIVW LETANEELCR ELHEYRSRCP GVEHSEKDFK DIRADDIVGS VRPDGLKRSL HSIESSNYPM VEATTGDSRE IDEEAKEWEH
0501: KLLQNSMDKE LYELNRRLEE KESEMKLFDG YDPAALKQHF GKKIAEVEDE KRSVQEERNR LLAEIENLAS DGQAQKLQDV HAQNLKALEA QILDLKKKQE
0601: SQVQLLKQKQ KSDDAARRLQ DEIQSIKAQK VQLQHRMKQE AEQFRQWKAS REKELLQLRK EGRKSEYERH KLQALNQRQK MVLQRKTEEA AMATKRLKEL
0701: LEARKSSPRE HSAGTNGFGT NGQTNEKSLQ RWLDHELEVM VNVHEVRHEY EKQSHVRAAL AEELAVLRQV DEFAVKGLSP PRGKNGFARA SSLSPNARMA
0801: RISSLENMLV ISSNSLVAMA SQLSEAEERE RAFTNRGRWN QLRSMGEAKN LLQYMFNSLA ETRCQLWEKD VEIKEMKDQF KEIVGLLRQS ELRRKEAEKE
0901: LKLREQAIAT SLGTPPSSVK HVAEDLSTPS PMTVPAQKQL KFTPGIANGK VRGPAAFLDT NKKMVPMGQV SMRKLSAVGK QGGRLWRWKR SHHQWIVQFK
1001: WKWQKPWRLS EWIRTSDETL LKSKPRLKAL PNKIM

Arabidopsis Description

KIN4AKinesin-like protein KIN-4A [Source:UniProtKB/Swiss-Prot;Acc:Q8GS71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.