Factsheet for Bra028334.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014969.1-P
Bra028334.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	Bra014969.1-P	AT3G23670.1	15258761
AT3G23670.1	Bra028334.1-P	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18100	Canola	cytosol, plastid	94.98	94.03
Bra014969.1-P	Field mustard	cytosol, plastid	87.56	85.06
AT3G23670.1	Thale cress	cytosol	83.31	82.1
GSMUA_Achr7P17300_001	Banana	cytosol	10.36	71.28
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	61.75	59.63
KRG97368	Soybean	cytosol, plastid	55.1	57.27
KRH31548	Soybean	cytosol, plastid	54.79	56.9
GSMUA_Achr9P01650_001	Banana	cytosol	49.0	56.46
Solyc12g098630.1.1	Tomato	cytosol, plastid	56.18	55.41
PGSC0003DMT400011905	Potato	cytosol, plastid	55.95	55.39
KRH58812	Soybean	plastid	48.53	53.68
Solyc09g097860.2.1	Tomato	cytosol	55.95	52.96
KRH42707	Soybean	plastid	48.3	52.74
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	46.29	51.42
TraesCS6A01G389400.1	Wheat	cytosol	22.02	50.26
KXG25952	Sorghum	cytosol, plastid	42.58	48.5
Os04t0350300-00	Rice	cytosol, plastid	26.28	48.5
TraesCS2A01G275700.2	Wheat	cytosol, plastid	41.81	47.62
TraesCS2B01G293400.1	Wheat	cytosol, plastid	41.81	47.62
PGSC0003DMT400042877	Potato	nucleus	30.6	47.31
Zm00001d025149_P001	Maize	cytosol, plastid	41.42	47.06
HORVU2Hr1G067290.2	Barley	cytosol, plastid	41.19	46.43
Os02t0489800-00	Rice	cytosol	21.41	46.32
TraesCS2D01G274700.1	Wheat	plastid	40.34	45.95
HORVU6Hr1G090690.2	Barley	cytosol, plastid	22.33	45.37
Bra021972.1-P	Field mustard	cytosol	4.87	32.81
Bra001776.1-P	Field mustard	plastid	28.67	30.06
Bra009591.1-P	Field mustard	cytosol	11.21	25.66
Bra011415.1-P	Field mustard	nucleus	10.97	21.26
Bra027851.1-P	Field mustard	cytosol	13.06	20.46
Bra034988.1-P	Field mustard	cytosol	19.4	19.78
Bra033586.1-P	Field mustard	nucleus	11.59	19.66
Bra037528.1-P	Field mustard	cytosol	15.46	19.44
Bra036060.1-P	Field mustard	cytosol	15.3	19.32
Bra036194.1-P	Field mustard	cytosol	15.46	19.16
Bra034785.1-P	Field mustard	cytosol	14.3	19.07
Bra011885.1-P	Field mustard	nucleus	11.67	19.04
Bra031179.1-P	Field mustard	nucleus	12.29	18.97
Bra033832.1-P	Field mustard	cytosol	15.38	18.92
Bra030304.1-P	Field mustard	nucleus	12.13	18.65
Bra035686.1-P	Field mustard	plastid	15.07	18.62
Bra020729.1-P	Field mustard	cytosol	14.53	18.45
Bra017256.1-P	Field mustard	cytosol	14.37	18.43
Bra005294.1-P	Field mustard	cytosol	14.37	18.43
Bra019444.1-P	Field mustard	cytosol, plastid	12.75	18.11
Bra028723.1-P	Field mustard	plastid	13.29	17.64
Bra010714.1-P	Field mustard	plastid	14.14	17.41
Bra031184.1-P	Field mustard	plastid	14.3	17.26
Bra017189.1-P	Field mustard	cytosol, plastid	13.76	17.1
Bra038694.1-P	Field mustard	cytosol	9.81	17.09
Bra031027.1-P	Field mustard	plastid	12.52	17.07
Bra025912.1-P	Field mustard	cytosol, plastid	12.83	16.94
Bra017946.1-P	Field mustard	plastid	11.44	16.57
Bra036834.1-P	Field mustard	cytosol	12.75	16.4
Bra029345.1-P	Field mustard	cytosol	15.77	16.01
Bra001287.1-P	Field mustard	cytosol	14.84	15.78
Bra012995.1-P	Field mustard	nucleus	15.38	15.61
Bra035302.1-P	Field mustard	cytosol	12.13	14.81
Bra033597.1-P	Field mustard	cytosol	13.83	14.68
Bra012866.1-P	Field mustard	cytosol	12.21	14.07
Bra013771.1-P	Field mustard	cytosol	11.98	13.1
Bra022212.1-P	Field mustard	cytosol	18.08	12.62
Bra022381.1-P	Field mustard	cytosol	24.57	11.24
Bra041153.1-P	Field mustard	cytosol	1.62	9.91

Protein Annotations

MapMan:20.1.3.10	Gene3D:3.40.850.10	EnsemblPlantsGene:Bra028334	EnsemblPlants:Bra028334.1	EnsemblPlants:Bra028334.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016787	InterPro:IPR001752	InterPro:IPR036961	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom
InterPro:Kinesin_motor_dom_sf	UniProt:M4EHR9	InterPro:P-loop_NTPase	PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411
PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413	SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI00025437D6
SEG:seg	:	:	:	:	:

Description

AT3G23670 (E=0.0) PAKRP1L, KINESIN-12B | KINESIN-12B; microtubule motor/ plus-end-directed microtubule motor

Coordinates

chrA01:-:18433030..18438752

Molecular Weight (calculated)

143682.0 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.638

Length

1294 amino acids

Sequence
(BLAST)

0001: MPRNAVVRDT GEPQSPNPSL TKSKSQRKSR SAKENAPPPD PNSLPPDYKS SPAKLKSPLP PRPPSANPLK RKLIAEAASD NGVAGVSDSG VKVIVRVKPP
0101: SKGEEEEMIV KKISSDALSI NDHTFTFDSI ADPDSTQDEI FQLVGAPLVE NCLAGFNSSV FAYGQTGSGK TYTMWGPANG LLEEHLSGDQ RGLTPRVFEL
0201: LFARISEEQV KHAERQLSYQ CRCSFLEIYN EQITDLLDPS QKNLMIREDV KSGVYVEYLT EENVKNLKDL SRLLIKQNAA DGLSSFKTSR INLVDLAGSE
0301: RQKSTGAAGE RLKEAGNINR SLSQLGNLIN ILAEVSQTGK QRHIPYRDSR LTFLLQESLG GNAKLAMVCA VSPSQSCRSE TFSTLRFAQR AKAIQNKAIV
0401: NEVMQDDVNF LREVIRQLRE ELQRVKNNGN NPANPNAAYA TSWNARRSMS LLRSFGLSHP KSLANGDDDG DTEMEIDEEA VERLCAQIGL QSSPPAEESN
0501: PDTSRVEKIN PSLQTLALED ENYENSHLQS SDGQSTGKQF PEDTDVNMED ASCQTENHEA VTINNEPTVE EIGITAAVQT MDHGSSVLPH LITNSLGSPI
0601: SNTDHDNSLG KAENIPSCQD LVPGALVSSI VSVADASDDT EHFSIIPVSP CLSLDPASAS PVLITPTESV SPRIRKSRKS LRTSSMSTAS QKDMERANQV
0701: TTEIMEPSSA VSTKMLKLPS AASTEKSGAF PVPTNQLAAS LHRGMKILDS YRQSTAQRRS TFGFSYKALE CKPSTVLSKA DVGVQTYPEA DIIAEENPKE
0801: VVCSKCKSIA ECDVQETSDI SNLQLVTVDN SEKSSFQVPK AVEKVLAGSI RREMALEEYC TKQASEISQL NRLVQQYKHE RECNAIIGQT REDKIVRLES
0901: LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ANHPEVLQTR IELKRAQEEL ESFKNFYGEM GEREVLLEEI QDLKAHVHCY TDTSLTSSRK RGSLLKLTYT
1001: CDPNPAPPLN AIPESVEESP EKTLVQERLR WTEAESNWIS LAEELRNELD TNRKLMEKQK RELDTEKRCT EELTEAMQMA MKGHARMIEQ YADLEEKHIQ
1101: LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEA QYFRDENKSL QSQLRDTAEA VEAAGELLAR LKEAEEGLKI AQKRATDAEY
1201: QASEAYKQIE KLKSKQETGF RTLNQQQGIA ESHNHIESLH GDDMAKYDGP VEEPSASSGD EQWREEFEPF YKKDAELAKL AEPSWFSGYD RCNI

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.