CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97368
KRH31548
KRH42707
KRH58812

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	KRG97368	AT3G23670.1	15258761
AT3G23670.1	KRH31548	AT3G23670.1	15258761
AT3G23670.1	KRH42707	AT3G23670.1	15258761
AT3G23670.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT3G23670.1	15258761
AT4G14150.1	KRH31548	AT3G23670.1	15258761
AT4G14150.1	KRH42707	AT3G23670.1	15258761
AT4G14150.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT4G14150.1	15258761
AT4G14150.1	KRH31548	AT4G14150.1	15258761
AT4G14150.1	KRH42707	AT4G14150.1	15258761
AT4G14150.1	KRH58812	AT4G14150.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42707	Soybean	plastid	92.31	91.14
GSMUA_Achr7P17300_001	Banana	cytosol	11.37	70.74
KRG97368	Soybean	cytosol, plastid	71.45	67.15
KRH31548	Soybean	cytosol, plastid	71.11	66.77
CDX85120	Canola	cytosol, plastid	22.82	64.65
CDX77491	Canola	cytosol, plastid	19.23	61.64
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	63.93	55.82
GSMUA_Achr9P01650_001	Banana	cytosol	53.42	55.65
TraesCS6A01G389400.1	Wheat	cytosol	26.07	53.79
AT4G14150.1	Thale cress	cytosol, plastid	57.27	51.86
Solyc09g097860.2.1	Tomato	cytosol	60.09	51.43
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	51.2	51.42
AT3G23670.1	Thale cress	cytosol	57.44	51.18
Solyc12g098630.1.1	Tomato	cytosol, plastid	57.09	50.91
PGSC0003DMT400011905	Potato	cytosol, plastid	56.67	50.73
CDY18100	Canola	cytosol, plastid	56.32	50.42
HORVU6Hr1G090690.2	Barley	cytosol, plastid	27.27	50.08
CDY56229	Canola	cytosol, plastid	56.07	49.89
Bra014969.1-P	Field mustard	cytosol, plastid	55.98	49.17
Bra028334.1-P	Field mustard	plastid	53.68	48.53
KXG25952	Sorghum	cytosol, plastid	46.84	48.24
TraesCS2B01G293400.1	Wheat	cytosol, plastid	46.32	47.71
TraesCS2A01G275700.2	Wheat	cytosol, plastid	46.32	47.71
TraesCS2D01G274700.1	Wheat	plastid	45.3	46.65
HORVU2Hr1G067290.2	Barley	cytosol, plastid	45.73	46.6
Zm00001d025149_P001	Maize	cytosol, plastid	45.21	46.44
Os02t0489800-00	Rice	cytosol	22.99	44.98
Os04t0350300-00	Rice	cytosol, plastid	26.32	43.94
PGSC0003DMT400042877	Potato	nucleus	30.77	43.01
CDY70999	Canola	cytosol, mitochondrion	26.75	42.18
CDY71066	Canola	cytosol, mitochondrion	26.24	41.49
KRH73858	Soybean	plastid	36.15	34.73
KRH14292	Soybean	cytosol, plastid	35.9	34.43
KRH71192	Soybean	cytosol	12.73	33.79
KRG98582	Soybean	plastid	32.48	33.3
KRH46292	Soybean	plastid	32.48	33.22
KRH12754	Soybean	cytosol	3.59	30.88
KRH02555	Soybean	cytosol	8.29	28.53
KRH38089	Soybean	cytosol	8.29	25.26
KRH05550	Soybean	cytosol	15.9	22.6
KRG88751	Soybean	cytosol	15.81	22.45
KRH33183	Soybean	cytosol	8.03	21.61
KRH04551	Soybean	cytosol	18.46	20.97
KRH57809	Soybean	cytosol	18.38	20.85
KRH61333	Soybean	cytosol	18.12	20.64
KRH15399	Soybean	cytosol	18.12	20.6
KRH52032	Soybean	cytosol	17.95	20.53
KRH05644	Soybean	cytosol	18.03	20.49
KRH05116	Soybean	cytosol	19.06	20.09
KRH26741	Soybean	cytosol	22.99	19.79
KRH24371	Soybean	nucleus	15.04	19.78
KRH51460	Soybean	cytosol	14.79	19.66
KRH29342	Soybean	nucleus	15.04	19.6
KRH22593	Soybean	cytosol	22.73	19.57
KRG95428	Soybean	plastid	16.84	19.43
KRH60764	Soybean	cytosol	14.79	19.24
KRH10347	Soybean	plastid	17.27	19.22
KRH71812	Soybean	cytosol, plastid	16.24	19.21
KRG88692	Soybean	cytosol	17.18	19.16
KRH24979	Soybean	cytosol	17.01	19.1
KRH67102	Soybean	plastid	16.5	19.03
KRH22970	Soybean	cytosol, plastid	17.09	19.03
KRH08108	Soybean	nucleus	15.04	18.8
KRH69811	Soybean	nucleus	15.04	18.55
KRH28771	Soybean	nucleus	14.96	18.36
KRH76685	Soybean	nucleus	15.04	18.22
KRG96202	Soybean	cytosol	15.64	18.19
KRH67944	Soybean	cytosol	15.56	18.09
KRH60786	Soybean	plastid	16.5	18.04
KRH32336	Soybean	plastid	16.07	17.97
KRH29374	Soybean	plastid	16.41	17.86
KRH19743	Soybean	cytosol, plastid	15.81	17.72
KRH61076	Soybean	cytosol	14.02	17.6
KRH24392	Soybean	plastid	16.32	17.54
KRH51475	Soybean	plastid	15.98	17.48
KRH19384	Soybean	cytosol	14.1	17.37
KRH48554	Soybean	cytosol	14.19	17.26
KRH38060	Soybean	plastid	9.15	17.09
KRH38250	Soybean	cytosol, plastid	5.98	17.07
KRH39148	Soybean	cytosol, plastid	14.02	17.05
KRH17972	Soybean	plastid	16.15	16.76
KRH51754	Soybean	cytosol	14.02	16.53
KRH72462	Soybean	cytosol	17.78	16.04
KRH16847	Soybean	cytosol	17.69	16.02
KRH62222	Soybean	nucleus	16.92	15.55
KRH02434	Soybean	cytosol	25.04	13.42
KRH50230	Soybean	cytosol, nucleus	28.03	11.75
KRH15784	Soybean	cytosol	12.99	8.83
KRH16381	Soybean	cytosol	4.7	8.3

Protein Annotations

EntrezGene:100790067	MapMan:20.1.3.10	Gene3D:3.40.850.10	EMBL:ACUP02003292	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G149700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0008574	GO:GO:0009987
GO:GO:0016787	UniProt:I1K3Q0	InterPro:IPR001752	InterPro:IPR036961	EnsemblPlants:KRH58812	ProteinID:KRH58812
ProteinID:KRH58812.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0002968819	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:34375496..34383952

Molecular Weight (calculated)

130047.0 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.568

Length

1170 amino acids

Sequence
(BLAST)

0001: MLPKNPIFRC RDTPSAHAFR KPRPTRKQKS KDKENHPPPF KSPLPPKPPN PNPLKRKLSD HSVPPTPGSG VKVIVRMRPA CDDGDEGDSI VQRISSDSLS
0101: INGQSFTFDS VAHSNATQLD IFELVGAPLV ENCLAGFNSS IFAYGQTGSG KTYTMWGPAN ALSDGNSASD QQGLAPRVFE RLFACINEEQ IKHSDKQLKY
0201: QCHCSFLEIY NEQIADLLDP NQRNLQIRED VKSGVYVENL TEELVCTKKD VTQLLIKGLL NRRIGATSIN SESSRSHTVF TCVVESRCKS TANGVSRFRT
0301: SKINLVDLAG SERQKLTGAA GDRLKEAGNI NRSLSQLGNL IKILAEVSQT GKPRHIPYRD SRLTFLLQES LGGNAKLALV CAISPAQSCK SETFSTLRFA
0401: QCVKDIKNKA VVNEVMHDDV NQLRDVICQL RDELHRIKAN GYSPSDGSRG HSAALIRRSL NLLKPTLNRP LSLPHVDEDG DEEMEIDEEG VEDHAVVLHN
0501: SNGGFAGFSA PNGSIGSPSA AMNGDSLAGG MVKCKTSPIL KSPPSSLSPT ISSSRKSLRT SLKQSPSENN IHGESDLGTN TVNQKCLSTA LSSQTAPNFV
0601: TKTENLAVSI RHGLEIIDSH HHGTSLSSLS LRPKDSRLII PVEKVDVGVQ TFLDDNAKKE DYAMLTCNNC KSRMQLDVNE IDNSSNVQQL LIDCPQSTGK
0701: PKKQILKAVE KVLAGSIRRE MALEEFCAKQ TSDIMQLNCL LQKYRQEREC NATITQIRED KILRLQSLID GVLSTKESMD EELVSLTHEN KLLKENHEHH
0801: LEVLKMKIEL KRVQDELQEY QNFYQFGERE VLMEEICSLR NQLHFYVDSS STAATKQYPP LQLTYSSEPS LEANLTAIPD LTEASTKANA NPESTEDSAK
0901: VKLEQEKSQW TEAESRWISL TEKLRAELET SRLLAEKRKQ ELDTERKCAE ELNETMQMAI EGHARILEQY ADLEEKHIQL LDRHRKIQDG IDDVKEAASR
1001: AAGVRGADSK FINALAAEIS ALKAEKEKEM EILRDENRGL RAQLKDTAEA VQAAGELLVQ LNEAEEAVIT AQKRAMDAEQ EAAKAYKQID KLKKKHDKEI
1101: STLNKLLAKT HLPNEEIRPT LDDLVMPTCD DTKVPNNVNG QFELFCSEED IELANLADQS WLSSYDTCNI

Best Arabidopsis Sequence Match ( AT3G20150.1 )
(BLAST)

0001: MADNRIAGSL PTSSKWSFLP KSVSSHFKPS SNPRSSNPDI ENAPPQNPNI HNPRNQSVSS KSTAYKNQMD SPNCRSQVSA SRPRAISALK TRNEVEEEGA
0101: SNPHVKVVVR IKPTKEYCWK VKKVSKVSYS VRDRHFTFDS VLDSNLNQDD VFQQIGVPLV RDALSGYNTS VLSYGQNGSG KTYTMWGPAG SMLEDPSPKG
0201: EQGLAPRIFQ MLFSEIQREK IKSGGKEVNY QCRCSFLEIY NGQISDLIDQ TQRNLKIKDD AKNGIYVENL TEEYVDSYED VAQILMKGLS SRKVGATSTS
0301: FQSSRSHVIL SFIVESWNKG ASSRCFNTTR TSRINLVDLA GAGTNERDAT KHCVEEEKFL KKSLSELGHV VNSLAENVHP GISDRSLHKT SCLTHLLQES
0401: LGGNSKLTIL CNIFPSDKDT KRTMSTLRFG ERAKAMGNKP MINEISEEDV NDLSDQIRLL KEELSKVKAD ACHSVGSKND YFGAKNARES LNQLRVSLNR
0501: SLMLPKIDND EEEITVDEDD FKELHLQIKS LRGSFNQKLK KFPVNRDSVN SSFVTAFGES ELMDDDEICS EEVEVEENDF GESLEEHDSA ATVCKSSEKS
0601: RIEEFVSENS ISISPCRQSL ILQEPIQSES PKFRDSLRKS IALSSSCLRN QNSLAKSIKS TCFAESQHIR SSLRGSKIFT GSTESLAASL RRGLDIIDNP
0701: MNPASNRCSV SLSSDNLTMQ PPTDDRLPLS PLCPTCRICS SKLPSVVEGD GYHMEGVLEK QQELEKLCSE QAAKIEQLTR LVGQHKLQTE DETEKLMGAS
0801: NGERLPSANE NQLLSCITET YDVKQISDDD SKKTDFDIGE KEALLKEIED LKKKLQTPVT MSTNELRSSL LARSFQLRSK NAEKDIEEER LRCTEMESEW
0901: ISLTDEFRVE IETQRTRAEK AEAQLKQEKL SSEELEDALR RAVLGHARFV EHYTELQEKY NDLCSKHKAT VEWITELKKA VAKAGKKGCG SRFAKSLASE
1001: LSALRVERER ERDLLKKENI SLKIQLRNTA EAVHTAGEVL VRLREAEQSA SAAEEKFNEV EEENEKLKKK MEKLKRRHKL EVVTIKKSLK QNTLPESALQ
1101: PLHQRNSAIE EEGM

Arabidopsis Description

KIN12FKinesin-like protein KIN-12F [Source:UniProtKB/Swiss-Prot;Acc:F4JDI6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.