Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400011905 | |
| PGSC0003DMT400042877 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g097860.2.1 | Tomato | cytosol | 95.34 | 58.38 |
| Os02t0489800-00 | Rice | cytosol | 35.48 | 49.67 |
| PGSC0003DMT400011905 | Potato | cytosol, plastid | 67.38 | 43.15 |
| Os04t0350300-00 | Rice | cytosol, plastid | 35.36 | 42.23 |
| VIT_05s0029g00400.t01 | Wine grape | cytosol, plastid | 57.59 | 35.97 |
| CDY70999 | Canola | cytosol, mitochondrion | 31.18 | 35.18 |
| CDY71066 | Canola | cytosol, mitochondrion | 30.94 | 35.0 |
| KRG97368 | Soybean | cytosol, plastid | 48.51 | 32.61 |
| KRH31548 | Soybean | cytosol, plastid | 48.27 | 32.42 |
| GSMUA_Achr9P01650_001 | Banana | cytosol | 42.53 | 31.7 |
| AT4G14150.1 | Thale cress | cytosol, plastid | 48.15 | 31.19 |
| KRH58812 | Soybean | plastid | 43.01 | 30.77 |
| AT3G23670.1 | Thale cress | cytosol | 48.27 | 30.77 |
| Bra028334.1-P | Field mustard | plastid | 47.31 | 30.6 |
| Bra014969.1-P | Field mustard | cytosol, plastid | 48.27 | 30.33 |
| CDY18100 | Canola | cytosol, plastid | 46.95 | 30.07 |
| CDY56229 | Canola | cytosol, plastid | 46.71 | 29.73 |
| KRH42707 | Soybean | plastid | 41.46 | 29.28 |
| GSMUA_Achr9P07340_001 | Banana | cytosol, plastid | 40.38 | 29.01 |
| TraesCS2D01G274700.1 | Wheat | plastid | 33.45 | 24.65 |
| TraesCS2B01G293400.1 | Wheat | cytosol, plastid | 33.45 | 24.65 |
| TraesCS2A01G275700.2 | Wheat | cytosol, plastid | 33.45 | 24.65 |
| KXG25952 | Sorghum | cytosol, plastid | 33.21 | 24.47 |
| HORVU2Hr1G067290.2 | Barley | cytosol, plastid | 33.45 | 24.39 |
| Zm00001d025149_P001 | Maize | cytosol, plastid | 31.3 | 23.0 |
| PGSC0003DMT400057119 | Potato | plastid | 26.05 | 18.32 |
| HORVU6Hr1G090690.2 | Barley | cytosol, plastid | 8.72 | 11.46 |
| TraesCS6A01G389400.1 | Wheat | cytosol | 7.53 | 11.11 |
| PGSC0003DMT400008772 | Potato | cytosol | 4.78 | 8.35 |
| PGSC0003DMT400014403 | Potato | nucleus | 4.3 | 7.29 |
| PGSC0003DMT400072611 | Potato | cytosol | 5.02 | 7.13 |
| PGSC0003DMT400020657 | Potato | plastid | 0.84 | 6.14 |
| PGSC0003DMT400024240 | Potato | cytosol | 8.12 | 5.61 |
| PGSC0003DMT400040181 | Potato | cytosol, plastid | 6.69 | 5.32 |
| PGSC0003DMT400005133 | Potato | cytosol, plastid | 6.33 | 5.15 |
| PGSC0003DMT400078142 | Potato | cytosol, plastid | 6.21 | 4.98 |
| PGSC0003DMT400012577 | Potato | cytosol | 4.3 | 4.35 |
| PGSC0003DMT400049453 | Potato | cytosol | 5.38 | 4.3 |
| PGSC0003DMT400031343 | Potato | nucleus | 4.9 | 4.23 |
| PGSC0003DMT400009519 | Potato | nucleus | 4.66 | 4.22 |
| PGSC0003DMT400009131 | Potato | cytosol | 5.14 | 4.2 |
| PGSC0003DMT400035325 | Potato | plastid | 4.78 | 4.18 |
| PGSC0003DMT400023094 | Potato | cytosol | 4.78 | 3.97 |
| PGSC0003DMT400007659 | Potato | cytosol | 0.0 | 0.0 |
| GSMUA_Achr7P17300_001 | Banana | cytosol | 0.0 | 0.0 |
| CDX85120 | Canola | cytosol, plastid | 0.0 | 0.0 |
| CDX77491 | Canola | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400042877 | EnsemblPlantsGene:PGSC0003DMG400016627 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 |
| GO:GO:0007018 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016787 | InterPro:Kinesin-like_fam | ncoils:Coil |
| PANTHER:PTHR24115 | PANTHER:PTHR24115:SF413 | PGSC:PGSC0003DMG400016627 | SEG:seg | UniParc:UPI000295FCA0 | UniProt:M1BDR1 |
| MapMan:20.1.3.10 | : | : | : | : | : |
Description
PAKRP1L [Source:PGSC_GENE;Acc:PGSC0003DMG400016627]
Coordinates
chr9:+:60330460..60334642
Molecular Weight (calculated)
94399.2 Da
IEP (calculated)
4.750
GRAVY (calculated)
-0.690
Length
837 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIVEEAELL GLLPGGSKEV GILRKTLSKS FLVGPAERGN EEKHSSCKGE VGSEDADVTM EEEVPEQVVQ PENKVIHGAG LQNLENCSMA EESIHQSCEE
101: ENVEADLKKS MSKRLDSDSS QDCLPSLAIN LLNQGVKGEL VEEIASEQCE GYNERTPENS SKCSEGDAAC RDVSVVTNDI SPILKSPTPS VSPRVNSSRK
201: SLRTSSMLSA SQKDLRESKL DEPHFSFAKP SNSICLDSQA NQRSKSCFTS TEHLAASLHR GLEIISNRQS TSLRRSSFRF SCKPADIRAI IPVAKVDVGV
301: QTIVTDDQSF EGGSIFLCSK CKERNSQQEL KYANDGSNMQ LVRVDESLLV PADGLQLVPA DGSQLVPADG SQSCEKFKIQ VPKAVEKVLA GAIRREMALE
401: EICAKQTSEI MQLNRLIQQY KHERECNAII GQTREDKIAR LESLMDGILP TEEFMEDELL SLTHEHKLLK EKYENHPEIL SAKIEIRRVQ DELEQYRNFF
501: DLGERDVLME EIQDLRSQLY FYVDSSPKPS KKGSSPLQLA YPCESSEPSV LSTIPESTEE SAEQRLEKER IQWSETESKW MSLVEELRLD LEASRSMAEK
601: HKQELNLEKK CSEELKEAMQ MAMQGHARML EQYAELEEKH MQLLIRHRKI QDGIEDVKKA AAKAGVRGAE SKFINALAAE ISALKVEREK ERRYYRDENK
701: GLQAQLRDTA EAVQAAGELL VRLKEAEEAI TAAEKRAIEA EHEAKTAYRQ IDKLKKKHEK EINNLNQLLE ESRLPKERSE VIVNSETITY DAREMNHGGD
801: QLSREEFESF YNREEEEDLS KLVEPSSWFS GYDRCNI
101: ENVEADLKKS MSKRLDSDSS QDCLPSLAIN LLNQGVKGEL VEEIASEQCE GYNERTPENS SKCSEGDAAC RDVSVVTNDI SPILKSPTPS VSPRVNSSRK
201: SLRTSSMLSA SQKDLRESKL DEPHFSFAKP SNSICLDSQA NQRSKSCFTS TEHLAASLHR GLEIISNRQS TSLRRSSFRF SCKPADIRAI IPVAKVDVGV
301: QTIVTDDQSF EGGSIFLCSK CKERNSQQEL KYANDGSNMQ LVRVDESLLV PADGLQLVPA DGSQLVPADG SQSCEKFKIQ VPKAVEKVLA GAIRREMALE
401: EICAKQTSEI MQLNRLIQQY KHERECNAII GQTREDKIAR LESLMDGILP TEEFMEDELL SLTHEHKLLK EKYENHPEIL SAKIEIRRVQ DELEQYRNFF
501: DLGERDVLME EIQDLRSQLY FYVDSSPKPS KKGSSPLQLA YPCESSEPSV LSTIPESTEE SAEQRLEKER IQWSETESKW MSLVEELRLD LEASRSMAEK
601: HKQELNLEKK CSEELKEAMQ MAMQGHARML EQYAELEEKH MQLLIRHRKI QDGIEDVKKA AAKAGVRGAE SKFINALAAE ISALKVEREK ERRYYRDENK
701: GLQAQLRDTA EAVQAAGELL VRLKEAEEAI TAAEKRAIEA EHEAKTAYRQ IDKLKKKHEK EINNLNQLLE ESRLPKERSE VIVNSETITY DAREMNHGGD
801: QLSREEFESF YNREEEEDLS KLVEPSSWFS GYDRCNI
0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI
Arabidopsis Description
KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.