CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97368
KRH31548
KRH42707
KRH58812

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	KRG97368	AT3G23670.1	15258761
AT3G23670.1	KRH31548	AT3G23670.1	15258761
AT3G23670.1	KRH42707	AT3G23670.1	15258761
AT3G23670.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT3G23670.1	15258761
AT4G14150.1	KRH31548	AT3G23670.1	15258761
AT4G14150.1	KRH42707	AT3G23670.1	15258761
AT4G14150.1	KRH58812	AT3G23670.1	15258761
AT4G14150.1	KRG97368	AT4G14150.1	15258761
AT4G14150.1	KRH31548	AT4G14150.1	15258761
AT4G14150.1	KRH42707	AT4G14150.1	15258761
AT4G14150.1	KRH58812	AT4G14150.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31548	Soybean	cytosol, plastid	93.57	93.5
KRH58812	Soybean	plastid	67.15	71.45
CDX85120	Canola	cytosol, plastid	23.61	71.19
KRH42707	Soybean	plastid	66.51	69.87
CDX77491	Canola	cytosol, plastid	20.0	68.22
GSMUA_Achr7P17300_001	Banana	cytosol	10.12	67.02
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	65.46	60.82
GSMUA_Achr9P01650_001	Banana	cytosol	53.49	59.31
PGSC0003DMT400011905	Potato	cytosol, plastid	60.16	57.31
Solyc12g098630.1.1	Tomato	cytosol, plastid	60.24	57.16
AT3G23670.1	Thale cress	cytosol	60.24	57.12
AT4G14150.1	Thale cress	cytosol, plastid	59.2	57.04
CDY18100	Canola	cytosol, plastid	59.84	57.0
Solyc09g097860.2.1	Tomato	cytosol	61.61	56.11
CDY56229	Canola	cytosol, plastid	59.2	56.05
TraesCS6A01G389400.1	Wheat	cytosol	25.3	55.56
Bra014969.1-P	Field mustard	cytosol, plastid	59.04	55.18
Bra028334.1-P	Field mustard	plastid	57.27	55.1
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	50.76	54.25
KXG25952	Sorghum	cytosol, plastid	47.47	52.02
TraesCS2B01G293400.1	Wheat	cytosol, plastid	46.99	51.5
TraesCS2A01G275700.2	Wheat	cytosol, plastid	46.99	51.5
HORVU6Hr1G090690.2	Barley	cytosol, plastid	26.27	51.33
HORVU2Hr1G067290.2	Barley	cytosol, plastid	46.51	50.44
Zm00001d025149_P001	Maize	cytosol, plastid	45.62	49.87
TraesCS2D01G274700.1	Wheat	plastid	45.46	49.82
Os02t0489800-00	Rice	cytosol	23.61	49.16
Os04t0350300-00	Rice	cytosol, plastid	27.55	48.93
PGSC0003DMT400042877	Potato	nucleus	32.61	48.51
CDY70999	Canola	cytosol, mitochondrion	28.27	47.44
CDY71066	Canola	cytosol, mitochondrion	28.19	47.43
KRH71192	Soybean	cytosol	13.25	37.41
KRH73858	Soybean	plastid	36.31	37.11
KRH14292	Soybean	cytosol, plastid	35.98	36.72
KRG98582	Soybean	plastid	32.77	35.76
KRH46292	Soybean	plastid	32.85	35.75
KRH12754	Soybean	cytosol	3.29	30.15
KRH02555	Soybean	cytosol	7.87	28.82
KRH38089	Soybean	cytosol	8.03	26.04
KRH05550	Soybean	cytosol	15.1	22.84
KRG88751	Soybean	cytosol	14.94	22.57
KRH04551	Soybean	cytosol	18.47	22.33
KRH57809	Soybean	cytosol	18.47	22.31
KRH33183	Soybean	cytosol	7.79	22.3
KRH15399	Soybean	cytosol	17.75	21.48
KRH05644	Soybean	cytosol	17.75	21.46
KRH61333	Soybean	cytosol	17.67	21.42
KRH52032	Soybean	cytosol	17.35	21.11
KRH10347	Soybean	plastid	17.67	20.93
KRH22970	Soybean	cytosol, plastid	17.59	20.84
KRH26741	Soybean	cytosol	22.57	20.68
KRH22593	Soybean	cytosol	22.41	20.53
KRG88692	Soybean	cytosol	17.27	20.5
KRH24979	Soybean	cytosol	17.11	20.44
KRG95428	Soybean	plastid	16.63	20.41
KRH05116	Soybean	cytosol	18.07	20.27
KRH24371	Soybean	nucleus	14.46	20.22
KRH67102	Soybean	plastid	16.47	20.22
KRH51460	Soybean	cytosol	14.14	20.0
KRH32336	Soybean	plastid	16.71	19.89
KRH29342	Soybean	nucleus	14.3	19.82
KRH71812	Soybean	cytosol, plastid	15.74	19.82
KRH19743	Soybean	cytosol, plastid	16.39	19.54
KRH67944	Soybean	cytosol	15.58	19.28
KRH60786	Soybean	plastid	16.55	19.25
KRG96202	Soybean	cytosol	15.5	19.18
KRH29374	Soybean	plastid	16.55	19.16
KRH60764	Soybean	cytosol	13.73	19.02
KRH08108	Soybean	nucleus	14.3	19.02
KRH24392	Soybean	plastid	16.55	18.92
KRH69811	Soybean	nucleus	14.3	18.76
KRH48554	Soybean	cytosol	14.46	18.71
KRH51475	Soybean	plastid	16.06	18.69
KRH39148	Soybean	cytosol, plastid	14.14	18.3
KRH28771	Soybean	nucleus	13.98	18.26
KRH76685	Soybean	nucleus	13.98	18.01
KRH19384	Soybean	cytosol	13.57	17.79
KRH17972	Soybean	plastid	16.06	17.73
KRH61076	Soybean	cytosol	13.25	17.7
KRH72462	Soybean	cytosol	17.67	16.96
KRH51754	Soybean	cytosol	13.41	16.83
KRH38060	Soybean	plastid	8.43	16.77
KRH16847	Soybean	cytosol	17.19	16.56
KRH38250	Soybean	cytosol, plastid	5.38	16.34
KRH62222	Soybean	nucleus	16.71	16.34
KRH02434	Soybean	cytosol	24.98	14.24
KRH50230	Soybean	cytosol, nucleus	27.79	12.39
KRH15784	Soybean	cytosol	12.77	9.24
KRH16381	Soybean	cytosol	4.66	8.75

Protein Annotations

EntrezGene:100790375	MapMan:20.1.3.10	Gene3D:3.40.850.10	EMBL:ACUP02010794	ncoils:Coil	EnsemblPlantsGene:GLYMA_18G003800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0005871	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0008574	GO:GO:0009987
GO:GO:0016787	UniProt:I1MYC2	InterPro:IPR001752	InterPro:IPR036961	EnsemblPlants:KRG97368	ProteinID:KRG97368
ProteinID:KRG97368.1	InterPro:Kinesin-like_fam	InterPro:Kinesin_motor_CS	InterPro:Kinesin_motor_dom	InterPro:Kinesin_motor_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00225	PRINTS:PR00380	ScanProsite:PS00411	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI000233F582	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:306787..313682

Molecular Weight (calculated)

139063.0 Da

IEP (calculated)

5.105

GRAVY (calculated)

-0.640

Length

1245 amino acids

Sequence
(BLAST)

0001: MKRFMLPRNP LRDAAELPSS PSPTPTTSSA KPRPSSRKHK PSKENDPPSD PNLVTPSPAK LKSPLPPRPP SSNPLKRKLT AADALTDNSL PAPSDSGVKV
0101: IVRMRPLSSD KDEGDPTVQK VSNDSLSING YNFTFDSVAD MAATQLDIFE HVGVPLVEHC LAGFNSSVFA YGQTGSGKTY TMWGPANCLS DENDQQGLAP
0201: RVFQQLFERI SEEQTKHSEN QLSYQCHCSF LEIYNEQIMD LLDPSQKNLQ IREDVKSGVY VENLTEEDVS SMKDVTQLLI KGLSNRRTGA TSINSESSRS
0301: HTVFICVVES RCKSASDGMS RFKTSRINLV DLAGSERQKS TGAAGERLKE AGNINRSLSQ LGNLINILAE VSQTGKQRHI PYRDSRLTFL LQESLGGNAK
0401: LAMICAISPA QSCRSETFST LRFAQRAKAI KNKAVVNEVM EDNVKHLRQV IRQLRDELHR IKANGYNPME SSGGHSAAWI RRSLTLLQSS LNRPPPLSRL
0501: DEDGDEEMEI DEEGLEDHDG VSYNANMPSN CNIIADNDNE MNTNDQDLAQ PSEEENIASC SVSKGLNEEP SCAMVRSSFS CPVGESDSPS AAMNCVSPAG
0601: LSIVHCDLSP ILSPTPSVSP RISTSRKSLR TSTGLSPSEN DLHVEKDLDM KTSNKKSSTS AFSSQTAPNF LNKTENLAAS IQHGLEIIDS YQRNSALRQS
0701: PYRFSLQPRK SKLTFPASKV DVGLQTSLDD IVGEDSVLFT CSNCNSRTQL HVNETDNDSN LQLVPVDCHE SADKTKKQVI KAVEKVLAGS IRREMALEEF
0801: CAKQTSEIMQ LNRLVQQYKH ERECNAIIAQ TREDKILRLE SLMDGVLPTE EFMEEELVVL THEHKILKEK YENHPEVLKM EIELKKVQEE LEKYQNFYKL
0901: GEREVLMEEI QSLRSQLQFY VDSSSTSARK QYPLLQLTYL SEPSMAATLT AIPVSTEERV ETNETLASSR NDIEVQFEQE RIKWTEAESR WISLSEELRA
1001: ELESSRLLAE KRKQELDAER QCTQELQEAM HMAIEGHARL LEQYADLEEK HIHLLARHRQ IQDGIEDVKK AASRAGVRGA ESKFINALAA EISALKAERE
1101: KEQRILRDEN KGLQSQLKDT AEAVQAAGEL LLRLKEAEEA VTTAQKQAMD AEQEAAKAYK QIDKLKNKHE KEIITLNELL AEARLPKESV LPTYDDDGVM
1201: PSYDNSKEPN SVNDQFEPFT NNAEYGELAK LAEPSWFSGY DRCNI

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.