CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX77491
CDX85120
CDY18100
CDY56229
CDY70999
CDY71066

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23670.1	CDX77491	AT3G23670.1	15258761
AT3G23670.1	CDX85120	AT3G23670.1	15258761
AT3G23670.1	CDY18100	AT3G23670.1	15258761
AT3G23670.1	CDY56229	AT3G23670.1	15258761
AT3G23670.1	CDY70999	AT3G23670.1	15258761
AT3G23670.1	CDY71066	AT3G23670.1	15258761

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70999	Canola	cytosol, mitochondrion	96.08	95.82
Bra014969.1-P	Field mustard	cytosol, plastid	95.68	53.15
CDY18100	Canola	cytosol, plastid	85.0	48.13
CDY56229	Canola	cytosol, plastid	84.86	47.76
AT3G23670.1	Thale cress	cytosol	81.35	45.85
Os04t0350300-00	Rice	cytosol, plastid	30.95	32.67
VIT_05s0029g00400.t01	Wine grape	cytosol, plastid	57.57	31.79
PGSC0003DMT400042877	Potato	nucleus	35.0	30.94
KRH31548	Soybean	cytosol, plastid	48.11	28.57
Solyc12g098630.1.1	Tomato	cytosol, plastid	50.0	28.2
KRG97368	Soybean	cytosol, plastid	47.43	28.19
PGSC0003DMT400011905	Potato	cytosol, plastid	49.59	28.08
GSMUA_Achr9P01650_001	Banana	cytosol	41.62	27.43
Os02t0489800-00	Rice	cytosol	22.16	27.42
Solyc09g097860.2.1	Tomato	cytosol	49.73	26.92
KRH58812	Soybean	plastid	41.49	26.24
KRH42707	Soybean	plastid	41.49	25.91
GSMUA_Achr9P07340_001	Banana	cytosol, plastid	39.59	25.15
Zm00001d025149_P001	Maize	cytosol, plastid	36.76	23.88
KXG25952	Sorghum	cytosol, plastid	36.35	23.68
TraesCS2A01G275700.2	Wheat	cytosol, plastid	35.54	23.15
TraesCS2B01G293400.1	Wheat	cytosol, plastid	35.54	23.15
TraesCS2D01G274700.1	Wheat	plastid	35.54	23.15
HORVU2Hr1G067290.2	Barley	cytosol, plastid	35.54	22.91
TraesCS6A01G389400.1	Wheat	cytosol	12.97	16.93
CDY36055	Canola	plastid	22.16	15.46
HORVU6Hr1G090690.2	Barley	cytosol, plastid	12.57	14.6
CDX82261	Canola	plastid	22.57	13.68
CDX85120	Canola	cytosol, plastid	7.57	13.56
CDX68941	Canola	cytosol	6.62	10.25
CDX85308	Canola	cytosol	12.57	9.04
CDY19973	Canola	cytosol	12.57	8.99
CDY63235	Canola	cytosol	12.57	8.95
CDY45912	Canola	cytosol	12.43	8.94
CDY35769	Canola	cytosol	12.43	8.9
CDX86343	Canola	cytosol	12.3	8.84
CDY55295	Canola	cytosol	14.86	8.67
CDX87944	Canola	cytosol	14.73	8.62
CDY47900	Canola	cytosol	7.97	8.54
CDY30599	Canola	cytosol	11.76	8.48
CDY17754	Canola	cytosol	11.76	8.45
CDX75326	Canola	cytosol	4.05	8.24
CDY67820	Canola	cytosol	9.19	8.23
CDX75327	Canola	nucleus	2.97	8.15
CDY67829	Canola	cytosol	9.05	8.11
CDY27279	Canola	cytosol	8.92	8.09
CDY08463	Canola	cytosol, plastid	10.54	8.02
CDY01095	Canola	cytosol, plastid	10.41	7.92
CDY14073	Canola	plastid	10.14	7.68
CDY04998	Canola	plastid	10.0	7.59
CDY58692	Canola	nucleus	13.11	7.57
CDY02183	Canola	nucleus	13.11	7.51
CDY47004	Canola	cytosol	12.7	7.45
CDY42843	Canola	cytosol	12.57	7.33
CDY45884	Canola	cytosol, plastid	6.49	7.31
CDY04671	Canola	plastid	8.65	7.13
CDY08179	Canola	plastid	8.65	7.13
CDY15900	Canola	nucleus	8.11	7.11
CDY31717	Canola	cytosol, plastid	9.86	6.97
CDX99601	Canola	nucleus	7.7	6.97
CDX82016	Canola	nucleus	8.11	6.96
CDY13822	Canola	nucleus	8.11	6.96
CDX82022	Canola	plastid	10.0	6.91
CDY22404	Canola	nucleus	7.16	6.9
CDY12957	Canola	cytosol	7.7	6.9
CDX84151	Canola	cytosol	9.46	6.89
CDY41952	Canola	nucleus	7.57	6.89
CDX77192	Canola	cytosol, plastid	9.73	6.88
CDX82979	Canola	cytosol, plastid	9.86	6.87
CDY23691	Canola	cytosol, plastid	9.86	6.87
CDX75064	Canola	cytosol	9.32	6.84
CDY42594	Canola	nucleus	7.57	6.81
CDX72718	Canola	plastid	9.32	6.78
CDX73746	Canola	cytosol	8.78	6.71
CDX74009	Canola	cytosol	11.35	6.7
CDY22394	Canola	plastid	9.32	6.65
CDY44836	Canola	cytosol	8.11	6.6
CDY30956	Canola	cytosol, plastid	8.11	6.59
CDX90305	Canola	plastid	9.19	6.58
CDY12116	Canola	plastid	9.19	6.58
CDY30779	Canola	cytosol	8.78	6.57
CDY21709	Canola	plastid	8.38	6.53
CDX81870	Canola	plastid	8.38	6.51
CDY07951	Canola	cytosol	11.22	6.46
CDY45220	Canola	cytosol	8.78	6.4
CDX77978	Canola	cytosol	8.51	6.38
CDY34261	Canola	cytosol	7.3	6.38
CDY19208	Canola	cytosol	8.38	6.37
CDY29004	Canola	cytosol	8.65	6.33
CDY26167	Canola	cytosol, plastid	8.38	6.33
CDX90660	Canola	cytosol	8.51	6.15
CDY18447	Canola	cytosol, plastid	9.32	6.14
CDX93381	Canola	cytosol, plastid	9.05	6.09
CDY03482	Canola	cytosol	7.57	5.86
CDX95855	Canola	cytosol	15.27	5.58
CDY43743	Canola	nucleus	6.89	5.39
CDX92299	Canola	cytosol	19.19	5.21
CDX99277	Canola	cytosol	18.92	5.18
CDX72728	Canola	cytosol	5.0	5.02
CDX92129	Canola	cytosol	10.54	4.08
CDY02395	Canola	nucleus	2.3	2.53
CDY03483	Canola	cytosol	0.54	2.26
GSMUA_Achr7P17300_001	Banana	cytosol	0.54	2.13
CDX77491	Canola	cytosol, plastid	0.95	1.92

Protein Annotations

Gene3D:1.20.58.1980	MapMan:20.1.3.10	GO:A0A078JZQ4	UniProt:A0A078JZQ4	EnsemblPlants:CDY71066	ProteinID:CDY71066
ProteinID:CDY71066.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00010963001	InterPro:IPR001752	InterPro:Kinesin-like_fam
InterPro:Kinesin_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00225	PFscan:PS50067	PANTHER:PTHR24115	PANTHER:PTHR24115:SF413
SMART:SM00129	SUPFAM:SSF52540	UniParc:UPI0004EEA7A9	SEG:seg	:	:

Description

BnaCnng71160DBnaCnng71160D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZQ4]

Coordinates

chrLK044326:+:166..2869

Molecular Weight (calculated)

82403.2 Da

IEP (calculated)

4.622

GRAVY (calculated)

-0.625

Length

740 amino acids

Sequence
(BLAST)

001: MLTIRVFTCR NLINILAEIS QTGKQRHIPY RDSRLTFLLQ ESLGGNAKLA MVCAVSPSQS CRSETFSTLR FAQRAKAIQN KAVVNEVMQD DVNFLREVIR
101: QLREELQRVK NNGNNPTNPN AAYTTSWNAR RSMSLLRSFG LSHPKFLAHG DDDGDTEMEI DEEAVERLCA QIGLQSAPPA EENNQEMGRD EDFNNSYLKS
201: ADGQSAGNQF PEDADVNMED VSCQTDGAVT TDSASTVTET SIPTAVQTLD HGSSVQTPLV TNSPGSCISD TNNENSPSKA ENVPSCQDLV PGALVSGIAS
301: VADAADDTEN FSENPGSPCL SIDPVNGSPL LITPTESVSP KVRNSRKSLR TSSMSTASQK DIERANQVTT ETVGPSSAMS THKSGAFPVP TNQLAASLHR
401: GMRILDSYRQ STAQRRSTFG FSYKALEYKP SSVLSKADVG VQTYPEAVTI SDENSKEVLC SKCKCIAECD AHETSDLSNL QLVPVDNSEV SEKSIFQVPK
501: AVEKVLAGSI RREMALEEFC TKQASEISQL NRLVQQYKHE RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLETR
601: IELKRAQEEV ESFKNFYGEM GEREVLLEEI HDLKAQLQCY TDSSFTSSRK RGSLLKLTHN CDPNQTPQLN AIPESMEESP EKTLSEQERL RWNEEESNWI
701: SLAEELRTEL DANRKLMEKQ KRELDTEKRC VEELTEAMQM

Best Arabidopsis Sequence Match ( AT3G23670.1 )
(BLAST)

0001: MKHFMMPRNA ILRDIGESQS PNPSLTKSKS QRKIKSSKEN APPPDLNSLI PDHRSSPAKL KSPLPPRPPS SNPLKRKLIA EATADNGVAI GVSDSGVKVI
0101: VRMKPPSKGE EEEMIVKKIS NDALTINEQT FTFDSIADPE STQDEIFQLV GAPLVENCLA GFNSSVFAYG QTGSGKTYTM WGPANGLLEE HLSGDQRGLT
0201: PRVFELLFAR LSEEQAKHAE RQLKYQCRCS FLEIYNEQIT DLLDPSLKNL MIREDVKSGV YVENLTEEYV KNLKDLSKLL VKGLANRRTG ATSVNAESSR
0301: SHCVFTCVVE SHCKSVADGL SSFKTSRINL VDLAGSERQK LTGAAGDRLK EAGNINRSLS QLGNLINILA EISQTGKQRH IPYRDSRLTF LLQESLGGNA
0401: KLAMVCAVSP SQSCRSETFS TLRFAQRAKA IQNKAIVNEV MQDDVNFLRE VIRQLRDELQ RVKDDKGNNP TNPNAAYTTS WNARRSLSLL RSFGLGHPKS
0501: LPNGDDDGDT EMEIDEEAVE RLCAQMGLSP PAEDNNQEMS RVEKINSSLQ TVVLKDESYN NSHLKSSEAT DVNMEDACCQ TENNGSETDN ALTVAETMDD
0601: GSSVQPDSIT NSLHSCISDT NQGNSPSKAE NIPSCQDLVI EADVSAIVSV ADTSNNTEQV SVNPVSPCLS VAPVSVSPVL IPPTESASPK IRNSRKSLRT
0701: TSMSTASQKD IERANQLTPE VVEPSPAMST EVLNLYSALS TKKSEAFPVP TRQLAASLHR GMKLLDSYRQ STALRRSTFR LSYKALECKP STVLSKADVG
0801: VQTYPQADEI AEDNSKEVLC SRCKCRAECD AQEISDTSNL QLVPIDNSEG SEKSNFQVPK AVEKVLAGSI RREMAMEEFC TKQASEISQL NRLVQQYKHE
0901: RECNAIIGQT REDKIVRLES LMDGVLSKDD FLDEEFASLM HEHKLLKDMY ENHPEVLQTR IELKRVQEEL ESFKNFYGDM GEREVLLEEI HDLKAQLQCY
1001: TDSSLTSARR RGSLLKLTYA CDPNQAPQLN TIPESVDEGP EKTLEQERLR WTEAESNWIS LAEELRTELD TNRLLMEKQK RELDTEKRCA EELTEAMQMA
1101: MQGHARMIEQ YADLEEKHIQ LLARHRRIRE GIDDVKKAAA RAGVKGAESR FINALAAEIS ALKVQREKEV RYFRDENKSL QSQLRDTAEA VQAAGELLVR
1201: FKEAEEGLTF AQKRAMDAEY EASEAYKKVD KLKRKYETEI STVNQQHNAE PQNPIESLQA SCNDDAMAKY DEPSASDGDN QWREEFQPFY KKDEELSKLA
1301: EPSWFSGYDR CNI

Arabidopsis Description

KIN12BKinesin-like protein KIN-12B [Source:UniProtKB/Swiss-Prot;Acc:Q8L7Y8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.