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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70170
CDX71815
CDX74505
CDX75826
CDX79708
CDX80954
CDX81722
CDX82437
CDX85730
CDX86248
CDX88648
CDX89193
CDX92648
CDX96836
CDX97807
CDX98183
CDX98822
CDY02778
CDY03428
CDY08267
CDY08725
CDY09178
CDY09179
CDY10748
CDY11025
CDY11841
CDY15450
CDY18468
CDY18994
CDY23989
CDY26081
CDY26819
CDY26965
CDY26966
CDY29659
CDY30354
CDY30747
CDY31715
CDY32499
CDY32739
CDY33924
CDY34301
CDY36499
CDY36574
CDY37439
CDY41170
CDY45734
CDY47131
CDY51107
CDY51271
CDY52144
CDY53304
CDY56435
CDY56997
CDY57462
CDY58906
CDY66142
CDY66415
CDY69109
CDY70877

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G39050.1 CDY15450 AT1G03140.1 21798944
AT4G39050.1 CDY32499 AT1G03140.1 21798944
AT4G39050.1 CDY37439 AT1G03140.1 21798944
AT4G39050.1 CDX81722 AT1G15570.1 21798944
AT4G39050.1 CDX96836 AT1G15570.1 21798944
AT4G39050.1 CDY36574 AT1G15570.1 21798944
AT4G39050.1 CDY53304 AT1G15570.1 21798944
AT4G39050.1 CDY66415 AT1G15570.1 21798944
AT4G39050.1 CDY08267 AT1G55890.1 21798944
AT4G39050.1 CDY26081 AT1G55890.1 21798944
AT4G39050.1 CDY26819 AT2G17670.1 21798944
AT4G39050.1 CDY30354 AT2G17670.1 21798944
AT4G39050.1 CDX97807 AT2G30580.1 21798944
AT4G39050.1 CDY10748 AT2G30580.1 21798944
AT4G39050.1 CDY23989 AT2G30580.1 21798944
AT4G39050.1 CDY29659 AT2G30580.1 21798944
AT4G39050.1 CDY47131 AT2G30580.1 21798944
AT4G39050.1 CDX79708 AT2G36990.1 21798944
AT4G39050.1 CDY18468 AT2G36990.1 21798944
AT4G39050.1 CDY66142 AT2G36990.1 21798944
AT4G39050.1 CDX75826 AT3G15360.1 21798944
AT4G39050.1 CDX82437 AT3G15360.1 21798944
AT4G39050.1 CDX71815 AT3G60360.1 21798944
AT4G39050.1 CDY41170 AT3G60360.1 21798944
AT4G39050.1 CDY56997 AT3G60360.1 21798944
AT4G39050.1 CDY58906 AT3G60360.1 21798944
AT4G39050.1 CDX92648 AT4G24680.1 21798944
AT4G39050.1 CDY03428 AT4G24680.1 21798944
AT4G39050.1 CDY11025 AT4G24680.1 21798944
AT4G39050.1 CDY34301 AT4G24680.1 21798944
AT4G39050.1 CDX89193 AT4G28230.1 21798944
AT4G39050.1 CDY18994 AT4G28230.1 21798944
AT4G39050.1 CDX70170 AT5G05190.1 21798944
AT4G39050.1 CDX80954 AT5G05190.1 21798944
AT4G39050.1 CDX98822 AT5G05190.1 21798944
AT4G39050.1 CDY52144 AT5G05190.1 21798944
AT4G39050.1 CDX85730 AT5G11090.1 21798944
AT4G39050.1 CDY51107 AT5G11090.1 21798944
AT4G39050.1 CDX74505 AT5G22890.1 21798944
AT4G39050.1 CDX98183 AT5G22890.1 21798944
AT4G39050.1 CDY09178 AT5G22890.1 21798944
AT4G39050.1 CDY09179 AT5G22890.1 21798944
AT4G39050.1 CDY26965 AT5G22890.1 21798944
AT4G39050.1 CDY26966 AT5G22890.1 21798944
AT4G39050.1 CDY31715 AT5G22890.1 21798944
AT4G39050.1 CDY69109 AT5G22890.1 21798944
AT4G39050.1 CDX86248 AT5G49210.1 21798944
AT4G39050.1 CDY33924 AT5G49210.1 21798944
AT4G39050.1 CDY56435 AT5G49210.1 21798944
AT4G39050.1 CDY70877 AT5G49210.1 21798944
AT4G39050.1 CDX88648 AT5G57910.1 21798944
AT4G39050.1 CDY02778 AT5G57910.1 21798944
AT4G39050.1 CDY11841 AT5G57910.1 21798944
AT4G39050.1 CDY32739 AT5G57910.1 21798944
AT4G39050.1 CDY51271 AT5G57910.1 21798944
AT4G39050.1 CDY57462 AT5G57910.1 21798944
AT4G39050.1 CDY30747 AT5G63350.1 21798944
AT4G39050.1 CDY45734 AT5G63350.1 21798944
AT4G39050.1 CDY08725 AT5G67530.1 21798944
AT4G39050.1 CDY36499 AT5G67530.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22394 Canola plastid 98.53 96.62
CDX90305 Canola plastid 91.54 90.13
CDY12116 Canola plastid 91.35 89.93
AT4G39050.1 Thale cress plastid 92.13 88.82
Bra033597.1-P Field mustard cytosol 98.62 82.28
CDX82022 Canola plastid 81.12 77.03
KRH51475 Soybean plastid 73.65 70.0
KRH60786 Soybean plastid 73.16 69.53
Solyc11g044880.1.1 Tomato plastid 72.47 69.07
VIT_03s0038g00350.t01 Wine grape plastid 74.73 69.03
Solyc10g054080.1.1 Tomato plastid 72.17 68.92
KRH29374 Soybean plastid 72.47 68.56
KRH24392 Soybean plastid 71.09 66.39
KXG38192 Sorghum plastid 66.08 64.06
Os10t0512800-01 Rice plastid 65.78 63.17
TraesCS1B01G202600.1 Wheat plastid 64.31 62.82
TraesCS1A01G177600.1 Wheat plastid 64.31 62.82
TraesCS1D01G176100.1 Wheat plastid 64.21 62.73
PGSC0003DMT400008772 Potato cytosol 29.3 62.21
Zm00001d032464_P008 Maize plastid 64.7 61.32
Solyc01g110190.2.1 Tomato plastid 64.31 61.18
Zm00001d013859_P002 Maize plastid 64.11 60.76
HORVU1Hr1G047110.10 Barley plastid 61.06 59.43
GSMUA_Achr11P... Banana plastid 21.24 57.6
CDY08179 Canola plastid 43.26 49.0
CDY04671 Canola plastid 42.97 48.66
CDY08463 Canola cytosol, plastid 44.35 46.4
CDY01095 Canola cytosol, plastid 44.25 46.3
CDY04998 Canola plastid 43.36 45.23
CDY14073 Canola plastid 43.26 45.04
CDY47900 Canola cytosol 29.5 43.42
CDX75327 Canola nucleus 9.93 37.41
CDY03483 Canola cytosol 6.19 35.59
CDX85120 Canola cytosol, plastid 11.6 28.57
CDX68941 Canola cytosol 13.08 27.82
CDX77491 Canola cytosol, plastid 9.44 26.3
CDY67829 Canola cytosol 18.88 23.24
CDY67820 Canola cytosol 18.88 23.24
CDY22404 Canola nucleus 16.13 21.35
CDY44836 Canola cytosol 18.49 20.68
CDY42594 Canola nucleus 16.62 20.56
CDY30956 Canola cytosol, plastid 18.39 20.53
CDY41952 Canola nucleus 16.32 20.42
CDY45884 Canola cytosol, plastid 13.18 20.4
CDX99601 Canola nucleus 16.32 20.29
CDY27279 Canola cytosol 16.22 20.22
CDY15900 Canola nucleus 16.72 20.14
CDY13822 Canola nucleus 16.91 19.95
CDX82016 Canola nucleus 16.91 19.95
CDY34261 Canola cytosol 16.42 19.72
CDX74009 Canola cytosol 23.3 18.9
CDY45912 Canola cytosol 19.08 18.85
CDX73746 Canola cytosol 17.9 18.8
CDY19208 Canola cytosol 17.99 18.79
CDY26167 Canola cytosol, plastid 18.09 18.78
CDY07951 Canola cytosol 23.7 18.75
CDY35769 Canola cytosol 18.98 18.67
CDX85308 Canola cytosol 18.88 18.66
CDY29004 Canola cytosol 18.49 18.6
CDY63235 Canola cytosol 18.98 18.58
CDX86343 Canola cytosol 18.78 18.56
CDY19973 Canola cytosol 18.88 18.55
CDY21709 Canola plastid 17.31 18.55
CDX75064 Canola cytosol 18.39 18.53
CDX77978 Canola cytosol 17.8 18.34
CDX84151 Canola cytosol 18.19 18.21
CDY30779 Canola cytosol 17.7 18.2
CDX81870 Canola plastid 17.01 18.15
CDX90660 Canola cytosol 18.19 18.07
CDY03482 Canola cytosol 16.81 17.91
CDX77192 Canola cytosol, plastid 18.19 17.69
CDY31717 Canola cytosol, plastid 18.19 17.67
CDY30599 Canola cytosol 17.7 17.54
CDY17754 Canola cytosol 17.7 17.49
CDY45220 Canola cytosol 17.4 17.44
CDY23691 Canola cytosol, plastid 18.09 17.33
CDX82979 Canola cytosol, plastid 17.99 17.23
CDX93381 Canola cytosol, plastid 17.31 15.99
CDY18447 Canola cytosol, plastid 17.31 15.67
CDY36055 Canola plastid 16.22 15.55
CDY55295 Canola cytosol 19.37 15.52
CDY43743 Canola nucleus 14.45 15.52
CDX87944 Canola cytosol 19.17 15.43
CDY18100 Canola cytosol, plastid 18.88 14.69
CDY47004 Canola cytosol 18.19 14.66
CDY42843 Canola cytosol 18.19 14.58
CDY56229 Canola cytosol, plastid 18.78 14.52
CDY58692 Canola nucleus 18.29 14.52
CDY02183 Canola nucleus 18.39 14.48
CDX72728 Canola cytosol 10.42 14.38
CDX82261 Canola plastid 17.21 14.33
CDX92129 Canola cytosol 19.76 10.52
CDX95855 Canola cytosol 20.85 10.47
CDX75326 Canola cytosol 3.74 10.44
CDY70999 Canola cytosol, mitochondrion 6.88 9.43
CDY71066 Canola cytosol, mitochondrion 6.78 9.32
CDY12957 Canola cytosol 7.37 9.08
CDX92299 Canola cytosol 22.42 8.36
CDX99277 Canola cytosol 22.22 8.35
CDY02395 Canola nucleus 2.56 3.87
Protein Annotations
MapMan:20.1.3.6Gene3D:3.30.40.10Gene3D:3.40.850.10GO:A0A078CCJ9EnsemblPlants:CDX72718ProteinID:CDX72718
ProteinID:CDX72718.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00100313001InterPro:IPR001752InterPro:IPR001841
InterPro:IPR013083InterPro:IPR036961InterPro:Kinesin-like_famInterPro:Kinesin_motor_CSInterPro:Kinesin_motor_domInterPro:Kinesin_motor_dom_sf
InterPro:P-loop_NTPasePFAM:PF00225PFAM:PF13920PRINTS:PR00380ScanProsite:PS00411PFscan:PS50067
PFscan:PS50089PANTHER:PTHR24115PANTHER:PTHR24115:SF497SMART:SM00129SUPFAM:SSF52540SUPFAM:SSF57850
UniParc:UPI0004EF1487InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
BnaC07g47400D
Coordinates
chrLK031796:-:2796704..2802904
Molecular Weight (calculated)
112678.0 Da
IEP (calculated)
5.586
GRAVY (calculated)
-0.534
Length
1017 amino acids
Sequence
(BLAST)
0001: MASSSSRTRS SSPFSNNRPA SPSSSTSSSH LSNRLLPRSM TPSRTFSDYG PIGSESFGTG SSVPYPSEEL LGEPVEETIS SERDSISVTV RFRPLSDREY
0101: QRGDEVAWYP DGDTMVRHDY NPLTAYAFDK VFGPQANTMD VYDVAARPVV KAAMEGVNGT VFAYGVTSSG KTHTMHGDQE SPGIIPLAIK DVFSIIQDTP
0201: GREFLLRVSY LEIYNEVIND LLDPTGQNLR VREDSQGTYV EGIKEEVVLS PGHVLSFIAA GEEHRHVGSN NFNLMSSRSH TLFTLMIESS ATGDEYDGVI
0301: FSQLNLIDLA GSESSKTETT GLRRKEGSYI NKSLLTLGTV IGKLSEGKAT HIPYRDSKLT RLLQSSLSGH GHVSLICTIT PASSSNEETH NTLKFASRAK
0401: SIEIYASRNQ IIDEKSLIKK YQREISILKL ELDQLRRGTL VGVSHEELMS LKQQLEEGQV KMQSRLEEEE EAKAALMSRI QKLTKLILVS TKNSRTGYLG
0501: DVPTHQRSLS AGNDDKFASL LLDNDNLGSP SSTLALVSDG SLGFNHRRSS SKLNGENSPG AEITQGVMTP DEIDLLVEQV KMLAGEVAFS MSTLKRLVDQ
0601: SVNDPENSQT QIQDLEREIQ EKQGQMRALE QLIIESGEAS IANASLVEMQ QKVMSLMTQC NEKSFELEIK SADNCILQEQ LQKKCTENKE LHEKVNLLEQ
0701: RLKAVSSGEY ADELKRKIQS QEIKNEKLKL EHVQIMEESS GLRVQNQKLA EEASYAKELA SAAAVELKNL ASEVTKLSLQ NTKLEKELAA ARDLAQTRNP
0801: MNGGRISSGR SSGDEFHSRS LDLEDLKMEL KARKQREAVL ESALSEKEFI EEEYRKKAEE AKRREEALEN DLANMWVLVA KLKKDNGASS EVNGTATDPA
0901: RQIEKSQSNT VLKERQVSSA PRQPEVVVVA KTEETPKEEP LVARLKARMQ EMKEKEMKSQ ANGDTNSHIC KVCFESPTAA ILLPCRHFCL CKSCSLACSE
1001: CPICRTKISD RLFAFPS
Best Arabidopsis Sequence Match ( AT4G39050.1 )
(BLAST)
0001: MASSSSRTRS SRPPSPASST SSSHLSNRLI PRSNSTSASS LITSAAGIAS RSMTPSRTFS DSGLIGSGSF GIGSPVPYPS EELLGDPMDD TISSERDSIS
0101: VTVRFRPLSD REYQRGDEVA WYPDGDTLVR HEYNPLTAYA FDKVFGPQAT TIDVYDVAAR PVVKAAMEGV NGTVFAYGVT SSGKTHTMHG DQESPGIIPL
0201: AIKDVFSIIQ DTPGREFLLR VSYLEIYNEV INDLLDPTGQ NLRVREDSQG TYVEGIKEEV VLSPGHALSF IAAGEEHRHV GSNNFNLLSS RSHTIFTLMV
0301: ESSATGDEYD GVIFSQLNLI DLAGSESSKT ETTGLRRKEG SYINKSLLTL GTVIGKLSEG KATHIPYRDS KLTRLLQSSL SGHGHVSLIC TITPASSSSE
0401: ETHNTLKFAS RAKSIEIYAS RNQIIDEKSL IKKYQREIST LKLELDQLRR GMLVGVSHEE LMSLKQQLEE GQVKMQSRLE EEEEAKAALM SRIQKLTKLI
0501: LVSTKNSIPG YSGDIPTHQR SLSAGKDDKF DSLLLESDNL GSPSSTLALL SEGSLGFNHR RSSSKLNDEN SPGAEFTQGV MTPDEIDLLV EQVKMLAGEI
0601: AFSTSTLKRL VDQSVNDPEN SQTQIQNLER EIHEKQRQMR GLEQLIIESG EASIANASLV EMQQKVMSLM TQCNEKSFEL EIKSADNCIL QEQLQEKCTE
0701: NKELHEKVNL LEQRLNAVSS EKSSPSCSNK AVSGEYADEL KKKIQSQEIE NEELKLEHVQ IVEENSGLRV QNQKLAEEAS YAKELASAAA VELKNLASEV
0801: TKLSLQNTKL EKELAAARDL AQTRNPMNGV NRKYNDGARS GRKGRISSSR SSGDEFDAWN LDPEDLKMEL QVRKQREVAL ESALAEKEFI EDEYRKKAEE
0901: AKRREEALEN DLANMWVLVA KLKKDNGALP EPNGTDPGRE LEKSQSHAVL KERQVSSAPR QPEVVVVAKT EETPKEEPLV ARLKARMQEM KEKEMKSQAN
1001: GDANSHICKV CFESPTAAIL LPCRHFCLCK SCSLACSECP ICRTKISDRL FAFPS
Arabidopsis Description
KIN7DKinesin-like protein KIN-7D, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8W5R5]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.